ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188634 | SNU-484
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◣ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

CCDC33
NRIP1
PPM1L
KCNJ18
CCL3
CCL3L3
CCL3L1
KCNN3
CD47
CACNB2
PRR3
GNL1
ZMYND11
EMC8
COX4I1
OBSCN
PRAMEF7
PRAMEF10
SPANXD
CDH18
NUDT14
SCHIP1
GREM2
KRTAP13-4
KRTAP13-3
OR5L1
RUNX2
TWIST1
GOLGA6D
MAST4
HPSE2
KRTAP19-5
KRTAP19-4
KRTAP19-3
KRTAP19-2
ZNF624
PGAM2
KRTAP2-4
KRTAP2-3
SLC17A2
CLDN17
RPN2
MROH8
SPAM1
HHLA2
OR2T35
OR2T27
BAGE4
BAGE3
BAGE
HS3ST3B1
RDH5
ITGA7
BLOC1S1
KCNMB2
RALA
FBXO9
LYZL4
PITPNM3
F12
PFN3
COTL1
GSTT2B
GSTT2
DDT
DDTL
HPS3
SLC35A5
ATG3
NEK11
ASTE1
TMPRSS15
C21orf91
C17orf113
RASGRF2
GCNT2
NEIL1
MBD3L4
MBD3L2
PCOLCE2
MUC4
HES1
IL13
ANP32A
MST1L
SLC16A1
MAPK13
CEP70
PALMD
DRD3
CRYBA1
FAIM
STAB1
JAG2
AK5
TMPRSS5
CELSR2
CFAP92
FSTL1
PDZRN4
B4GALNT2
RIPK3
ADCY8
SLFN5
TMEM14B
KIF6
DONSON
OR5H14
LMNA
PSMA5
SKAP2
GOLGA6C
LY9
DTD2
TBC1D16
CCDC40
KIAA0513
PEX6
HOATZ
BTG4
GAGE12J
GAGE12G
GAGE12D
RNF19B
SPDYE2B
SPDYE2
SAMSN1
FAM106C
CLDN16
WAC
KCNS1
FAM83B
WFDC5
FXYD4
ZBTB22
TAPBP
DAXX
NATD1
TFEB
HSF4
ABCB10
TRADD
FBXL8
B3GNT9
GOLGA6A
PGC
RUNX3
P2RY11
PPAN-P2RY11
PPAN
ANGPTL6
BIN2
DBNDD2
PEX5L
TMCC1
SPATA22
OR12D3
OR5V1
RSPH10B2
RSPH10B
MYOCD
AFF3
MACO1
ABHD3
GJA4
DGAT2
ABTB1
TMEM41A
UST
SLC25A36
GJB3
CYGB
SPDYE18
RHCE
CHODL
SLC6A3
CTAG1B
CTAG1A
KCNIP4
CDC14C
UNC5B
LRRC52
PRCD
MSS51
CFAP44
SPATA2L
GASK1A
PHLDB2
RBM25
NCAM2
PAK2
YPEL3
TBX6
TRIM27
NEU1
ARIH1
SLA
HLA-F
FOXG1
NRSN1
TBC1D28
PGA4
DYM
NAV2
UBL7
ANGPTL3
UBE2D2
GLS2
SH3GL1
CHAF1A
ATP5PO
GGCT
USP10
FOXL3
RANBP3L
OPALIN
SYT12
DHRS7B
SEMA5B
TRIM17
TRIM11
ZBTB20
COG2
C1orf21
C17orf50
GAS2L2
IGF2BP3
ASB17
BCR
SAFB2
SAFB
RPS6KL1
KCNAB1
DYNC2I1
SUN3
DNAJC27
C7orf57
NUDT16
VMAC
NDUFA11
LMNTD1
CRP
CDCA4
AGK
DNAL4
CRISP1
NOXRED1
MTMR8
LGMN
CBLB
CLDN18
MED1
CDK12
MARCHF6
EXOC6
OR4D6
NAT10
PGA5
BATF
ZNF565
ZNF512B
SAMD10
PRPF6
IQCC
DCDC2B
CCDC28B
NET1
MX2
TRAM2
PANK3
CSNK1G3
SEPTIN7
HENMT1
TOP2A
SRP9
DLGAP1
B3GNT5
P2RY12
CAMKK1
HDDC2
LPA
EIF3B
EGFR
PCNX2
MECOM
UBA7
EIF4E3
KLHL7
EPHB3
NLGN1
GUCA1B
NMNAT3
CASP12
HHLA1
RIMS1
PAPOLB
SLC7A14
RASGEF1C
NPY4R2
NPY4R
LRRN2
HSD17B10
OR2T3
SLC9A5
FHOD1
DENND2B
NEO1
POTEH
EPHA8
POU6F2
RIOK1
CAGE1
NDUFS8
COQ8A
ADAT2
PEX3
RASD2
KIAA0319
NOMO3
NOMO2
ABCC6
CCRL2
PRAMEF33
PRAMEF15
WFDC13
WFDC10B
MAS1L
ADA2
AGAP11
ADIRF
GPER1
ENHO
C17orf97
UBE2L3
NPC2
ISCA2
PTPRM
TARS1
POGK
OARD1
NFYA
IFT80
UBE2D1
AHNAK2
CLBA1
RARRES1
SMC4
P2RY14
APP
IRF8
BCAS1
COMMD2
GSTO2
ZNF322
GPR156
AKR1C3
DPP6
RPS3A
PMM1
GALK1
SBK3
DDR1
GHSR
CHRM1
GLCE
RBPJL
MATN4
ARL17B
ARL17A
RNF112
CLUL1
PLSCR2
ARID3B
LTBP2
TM4SF4
KIAA1549L
ZSCAN16
INO80D
PRSS35
KRTAP26-1
GATA2
GRIK1
CTSK
TAF10
PLA1A
TPP1
C9orf40
BEND7
STXBP6
ZBTB48
CRCP
PLSCR4
SLC17A6
NOTCH2NLC
BET1
COX10
SELENOT
PRKAR1B
TRIM49C
OR8S1
TAB2
GDPD5
GUK1
PXDC1
PSMB4
FAM236D
FAM236C
GRIK4
GFM1
ABCF3
SUCNR1
SIDT1
COLCA2
MCTP1
NUDT1
MRM2
PNPLA1
ELAC2
GAP43
WAPL
ZNF12
IL15RA
PHACTR1
SORCS3
PI16
RNF165
SHOX2
RSRC1
ZFYVE26
APC2
ZCCHC17
SNRNP40
TRIM50
FKBP6
VIPR1
COPS3
VSTM2A
DBNDD1
SMYD3
ZNF778
OTULINL
IL17F
TM7SF2
MOG
GAS8
C9
GPRIN2
OR2W3
RTP1
EGFLAM
CYRIB
FKBP5
INAVA
AHI1
SYNE2
AUTS2
CD36
MAGEF1
NUAK2
TUBA8
EXPH5
CD5
POLR2H
CLCN2
FASTK
TMUB1
AGAP3
FRMPD2
CRISPLD2
PHF3
NPHP1
ELMO1
RAB3GAP2
CFHR2
ZNF641
RAI1
MRPL40
HIRA
MADD
ANO3
GRPEL2
SP100
ARHGAP21
SEMA3D
MYC
P2RY1
C1QTNF6
SNCG
MMRN2
SIVA1
SEC61G
PELI1
MRPL55
CDC42EP3
PARP9
DTX3L
NPIPA3
NPIPA2
RRP15
ACAD9
ZMIZ1
ZBTB9
SLC18A3
CHAT
C21orf62
DHRS4L2
MRGPRF
XKR6
AFAP1
EMC3
GZMB
RBAK-RBAKDN
RBAK
AGAP2
CELF6
SPATS1
PRR9
FOXD4L1
PEX10
MRGPRX3
CPA4
PCYOX1L
MLIP
TESMIN
PLAAT1
SYTL2
AMY1C
AMY1B
AMY1A
FAM3B
PRR23D2
PRR23D1
FMO3
CCL11
OR5H2
OR52A5
TAAR1
DEFB112
NBPF7
PLD5
OR2F1
AGTR1
LELP1
DDI1
ARL9
NPY1R
SLC8A2
OR6Y1
OR4D2
NYNRIN
NR5A2
NNMT
LOC389199
GYPA
BEND2
ADGRG4
NFKBIZ
ADTRP
OR2T2
CCDC14
BOD1
OR2T7
ATXN1
SPTBN4
NCEH1
SELL
JAM2
STARD7
MYO15A
PPIAL4F
PPIAL4E
PPIAL4D
SLC17A3
SPECC1
TPGS1
MADCAM1
BATF3
CD63
USF3
PHAX
ALDH7A1
GDF11
ZNF823
FAM83D
CLRN1
NKAIN1
TRAPPC5
PARP15
RAB22A
FSCN1
LPIN1
RIPOR1
RFXAP
TSPAN18
VDR
ATG9B
ABCB8
ZKSCAN7
IMPACT
LGALS12
CCDC54
BTN1A1
JARID2
LYST
SNAP47
JMJD4
POLR2J2
EFR3A
TRAF5
LPP
CRIP3
AGR3
PRPS1L1
DNAH14
SLC22A7
ZCCHC14
ZNF148
RRAGC
PAK1
MAP4
LIPA
SLC26A8
RASGRP3
EEF1E1
LYZL1
LARP1
TWSG1
UACA
PAX7
SLC35G4
PTK2
VWC2
SLC22A23
WNK4
ARHGEF17
NBPF1
DNAJC5
COA3
CNTD1
JADE2
NOMO1
CYP1A2
RPTN
THSD4
H1-7
ADGRL4
ZNF705G
EPB41L2
SEMA4A
TXNDC12
BTF3L4
VANGL1
MAP3K13
SDK1
IL7R
MINPP1
CCDC152
TMPRSS13
CTAGE15
MGAM2
SMIM23
ECE1
CTXND2
COPB1
MPRIP
HELZ
MAN1C1
MARCHF3
AEBP1
MBD3L2B
ZNF286A
BDH1
GTF2H2C_2
GTF2H2
RABIF
ABHD6
MTHFSD
FOXC2
TRPV4
SEMA3E
BBS7
DUSP18
MBD3L5
OR4K2
NDRG1
HRNR
NOBOX
TMEM229B
BAIAP2
CDCA7L
ESYT2
PPP1R3B
CSNK1G2
H2BC4
H2AC6
NT5C2
SORL1
GPLD1
ALDH5A1
STXBP4
COX11
CDC42BPA
PLEKHH1
TSPAN11
SRGAP2C
FAM72B
ARHGEF16
OPRD1
PRSS3
FBLN1
TOPAZ1
ARHGEF10L
CORO2B
CCDC88C
GAB2
BRF1
PCGF5
STAP2
C2orf78
MRPS18B
ATAT1
PRTFDC1
BTBD6
RETREG1
ERV3-1-ZNF117
ERV3-1
DPP10
PAQR9
C7
SLC30A10
OR51V1
GSDME
HMGA1
NUMBL
RIPK1
TMEM243
PKN2
ALDH3A2
PARL
PRKAR2A
TSC22D4
TIRAP
TFDP2
TTLL5
ERG28
ATXN3
KCNQ3
C7orf61
GHR
GRK7
OR6C3
GOLGA6L10
CGGBP1
SPRYD4
SLC38A9
CARD11
RAB1B
AP2M1
CDR2L
TARBP1
HID1
C12orf66
KLC2
ZNF654
XAF1
PPFIA4
EIF2AK2
CHRDL2
MET
OR10J5
NMRK2
FADS6
MGAT5B
LOC100509620
LARGE1
NPIPB3
RNF213
GSTP1
C16orf54
RASAL2
PNRC2
PISD
DRC3
EPHB1
PDIA5
NDUFB5
MRPL47
CCDC116
ADAM17
ZNF783
CDC5L
REEP6
ZFAND2A
SDF2L1
KRTAP27-1
KRTAP23-1
PAQR5
VIT
FAM156A
ITIH5
CLASP2
TREML2
GBX1
PACS2
VDAC1
CD1E
DKK4
FAM221A
MTARC1
RSC1A1
GOLGA6B
DYDC2
DYDC1
GABRB3
PPP1R12B
GPR141
RNF139
TCF4
CBFA2T3
FOXO3
B3GALNT2
GRAMD1B
NEURL1
QSER1
SLCO4C1
SAC3D1
CCDC146
IL1A
SHISA8
PTGIR
SEMA4B
LRRC37A
ATP6V0E2
H1-2
POLR2J3
KCTD1
TIMM21
FBXO15
RAX2
PDE4D
TAB1
C4B_2
C4B
KCNK2
FHIT
MRPL3
INCA1
POC5
ZNF75A
TIGD7
BTBD9
BTG2
LAD1
N6AMT1
PON1
SLC35A1
TNIK
ZDHHC11
ZNF564
TARBP2
NPFF
FGD4
GNG8
MAP3K12
OR2T5
H3C3
PLXNA4
PDCD6
PADI1
ERCC6
TTC16
PTRH1
CFAP157
SFXN1
LCTL
CCER2
TBRG4
CDK5RAP3
RHD
SNX32
RTN4RL1
DPH1
SYT2
SEC13
MT2A
SAMD9L
CUL7
PIWIL4
DNAJC13
TNXB
SOX30
C5orf52
TMEM14A
SULF2
H2BC3
RASGEF1A
SOCS7
GPR179
AGT
COL4A4
COL4A3
FERD3L
KIF1C
OR2T29
VSX1
AZIN2
CHI3L1
CROCC
CARD14
DYSF
CHGA
SPDYE4
GPR20
CCKBR
OR5I1
TMPRSS4
SMIM35
TPRG1
VCX
OR5K3
ITPRID1
GATA5
GGT2
UGT3A1
CASR
MUCL1
CSNKA2IP
PLG
OR56A4
OR52E8
OR52E6
KRT2
OR5T3
ZNF662
TMEM247
KRTAP20-3
C2orf73
LONRF2
TAS2R41
SEMG2
PPARG
P2RY4
OGT
NKX2-3
MCTS1
LBX1
KRT77
FOLH1B
CDH26
CASP5
ADCYAP1R1
PLEKHO1
ZNF80
STT3B
CCDC112
TRPC1
DGLUCY
ZC3H12A
RPS6KA5
DRG2
BLVRB
ALPL
ALG9
ARHGAP19
ICMT
HES3
RAET1L
SPINT4
LGI1
LRRTM4
TUBB3
ABR
IFT140
CRAMP1
SNAP29
PI4KA
ENTPD1
HIGD2B
BBS4
UMAD1
NEPRO
RAB5B
SEC61A1
PMEL
CDK2
CELA1
MRNIP
NCOA6
ARL14
PPIAL4C
FAM72C
KRTAP13-1
CAMSAP3
C1QA
RASSF8
EYA2
C1QC
PPFIBP2
SEPTIN9
ST6GAL1