ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19719536 | NK-92
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◣ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

LOC102724770
DGCR6
DUX4
FRG2C
FRG2
RPEL1
COL23A1
CYP51A1
ITGAD
KMT2A
VPS37C
RUNX3
TOX2
ARHGAP39
GTPBP6
FCRL6
VPS36
CKAP2
DSTYK
CD44
PHLDA1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MYEOV
BTNL9
ETFB
NKG7
CLDND2
ATF4
H3C4
H2AC7
H4C5
H2BC7
BTRC
APOBEC3H
ARHGEF12
DENND2D
SNAPC3
ART1
GSPT1
LNPEP
LTBP2
PSIP1
GNPDA1
BCL3
CCL3
FCGR3A
ICE2
IL1A
CHST12
MYCBP2
TBKBP1
RASA1
ATAD2B
ZNF341
UPF3A
H2AX
DPAGT1
HMBS
TADA1
AGTRAP
OSBPL8
FAM243B
FAM243A
FZR1
DOHH
ZBED4
NOTCH2NLB
RIPOR2
CTR9
RUNX2
METTL9
NUP210
TLN1
CREB3
RUNX1
RBM38
GFRA4
RPL35
ARPC5L
GTPBP8
PHRF1
CCND3
TMBIM4
ZNF500
NR4A2
NAT10
RIN1
BRMS1
PECAM1
ZZZ3
SSX2IP
CCDC200
ZYG11B
NTMT1
C9orf50
NUDT4B
TSPAN14
NSFL1C
CAMSAP2
WWOX
PTPN12
ATP23
C10orf62
HOGA1
USPL1
HMGB1
CD96
BZW1
NCOA3
WDR24
JMJD8
PPIB
ZMYM4
DPF1
PJA2
XCL2
TAGAP
FKBP5
ARMC12
RBSN
ESYT2
DYNC2I1
MAD1L1
NEIL1
XYLT1
TPCN2
SRSF5
NFE2L1
COPZ2
SLC3A2
TLE4
ZFYVE28
CFAP99
FAF2
IST1
ZNF821
C20orf203
EMP3
CCDC114
AHNAK
RNF187
BHLHE40
RCOR3
FGR
FRA10AC1
TPR
ODR4
NOTCH2NLC
ZNF683
ANKRD46
SNTB2
TFAM
UGCG
UBQLN1
RPS3A
GTF2A2
TSC22D2
SLC39A13
GTF2E2
PACSIN3
ARFGAP2
MLLT6
MYO1F
MYH9
ANXA2R
TMC8
TMC6
EAPP
DPY19L1
CAST
PJVK
PRKRA
ZNF101
ATP13A1
FBXL12
UBL5
PIN1
ANXA5
SPAG8
HINT2
OSM
NUCB2
OR2T1
SIT1
USP30
ZNF22
SEPTIN9
EHD1
AP1G1
SDCCAG8
CEP170
CLN5
PDAP1
BUD31
NRROS
CCNI
NDUFA4
CALHM3
PCNA
CDS2
TMEM230
SLC2A8
ANP32B
IER3
FLOT1
SS18
EGFLAM
AMPD3
RERE
CCDC102A
ADGRG5
MIA
RAB4B
GCNT1
NAPA
P2RX5
FAM160A1
CD37
FAM177B
DNAJC5B
CRTAM
SRM
PTK2
CLECL1
EHF
OLIG1
GLDN
SBF2
ADM
EMID1
GPR68
BHLHA15
GSK3B
PLEKHA1
EGR2
ADO
CRK
ALOX5AP
HELZ2
PTAFR
PIK3CG
HNRNPLL
ATP12A
CRYBB1
LMNA
RYK
FMNL3
PLK1
CLMN
CLCF1
ABHD12B
GRHL3
CD2BP2
SUCLG2
IFFO2
PTPN6
C12orf57
CNR2
SEPTIN2
HDLBP
SYS1
TP53TG5
ITGAE
IFNLR1
HYLS1
UBE2G1
SYTL3
DYNLT1
ZNRF1
RAB3GAP1
ASB2
IL17RA
C12orf42
DDHD1
DEF8
SNX9
UPP1
DTX2
NIBAN3
KCNK7
ARIH2
CTTN
ACTA1
SLC2A5
FCER1G
TOMM40L
APOA2
GCNT2
VOPP1
BID
TTC28
TTC21A
GORASP1
SMYD4
RPA1
TMEM229B
DAG1
SYNE1
WDR74
STX5
RNF111
LDLRAP1
PPFIBP2
WDR81
ALCAM
CEACAM16
EPYC
ITK
SPATA4
GPR35
PTH2
GFY
FAM71B
ARID5A
ADAP1
IFIT3
IGLL5
LCP2
FCER2
CD28
RFC2
TRAPPC5
TUBB3
MC1R
LSP1
PMEPA1
CCR1
AIPL1
ZNRF3
KIF13A
IL19
IL10
CYP1B1
CTSZ
SH2B3
KMT2E
GNA13
NDUFS6
MRPL36
HSH2D
FGF2
TSHR
MPEG1
TMCC3
RORA
BLK
KLRD1
HMCES
COA6
TPCN1
IQCD
PIK3CA
GCDH
LGMN
CLN3
APOBR
IL20RA
FCRL4
RSPH9
VPS37B
TCF7
PARP15
TNIP2
MAD2L1BP
GTPBP2
JAML
SMIM3
NCKAP1
HES1
AFF3
TMEM109
DMWD
WNT10B
PANK1
LYL1
DCDC2
PAXX
CLIC3
DOCK10
CDKAL1
CCL4L2
CCL4
SSTR3
PRPF19
AMZ1
TNFRSF10A
FBXO17
WNT1
RAD52
LDLRAD4
RIN3
PDGFB
NT5C1A
ACSL6
SELPLG
ESR1
RAB8A
SPR
SPRED2
FLT3LG
BAIAP2
DMPK
YARS1
S100PBP
CHI3L2
SERF2
MB
PLCB1
LMO2
CUEDC1
PLEKHG6
MACC1
TMEM53
ARMH1
UTRN
SEMA6A
TUBG2
SERINC2
LZTFL1
ELL3
SMG6
DGKD
UBE2E1
TUBG1
RETREG3
KCNN3
RABGAP1L
LARGE1
ITGB7
BANK1
PIP4K2A
STK17B
WFS1
TIGIT
CFAP54
TTC30B
PLEKHG1
FOXN3
TNF
CD209
RASSF5
ADAM22
RFTN1
LTA
LRP5L
SORBS1
LAMC1
SPON2
LIMS1
ARHGEF3
ZNF791
ZNF490
ASAP1
CAMK1
TOM1
PIKFYVE
DLG1
SH3BP1
HSBP1L1
KCNJ15
SMIM11B
SMIM11A
KLHDC4
MAP1LC3B2
TTC39C
NFKBIZ
RFFL
GRAMD2B
C1orf127
RGS1
PARP1
SLC20A1
MED31
C17orf100
CASP8AP2
SYCP2L
GCM2
RHEX
CRACR2A
PRR5
APOBEC3B
HEXA
JAG1
DMXL2
DTHD1
FCRLB
OXCT2
SRC
RNASET2
PSMC3IP
NDFIP2
MIGA1
CLEC4M
MFF
LAMP3
PDXK
NOP14
GRK4
ATP2C1
PDE2A
DBNDD1
NTRK2
IGSF6
PLSCR2
UPF1
IL4
GPR132
BIRC3
CRLS1
STBD1
ITGAX
RNF170
HOOK3
ADGRG1
SLC24A1
BMP5
MIA3
MGAT5
APBB1
ABCD2
ZNF541
DUSP6
UHRF2
SNX20
SEC14L1
NOD2
PSMA6
PIGV
TSACC
CCT3
GPR25
FASLG
CNIH1
PTPN3
DNAAF1
DERL1
BTN3A2
THAP9
SEC31A
TENT4B
SLC5A1
LAT2
TMEM116
ERP29
PKM
ANXA4
ZNF705E
E2F7
AAK1
THEMIS2
CCDC9
TANK
EFHB
KLRG1
PLD4
MCTP1
ZSWIM6
SMARCAL1
GLDC
LUC7L
FAM234A
C12orf40
BCL2L11
MGAT1
ACP5
MNX1
NOL4L
FABP5
SZRD1
SUN1
SPTY2D1
ATP1A4
ZNF302
LAMB4
SLC37A3
ELOF1
CD226
SYPL1
ADGRE3
MGAT3
CDC42BPG
CCIN
RASSF2
LAMC2
CYFIP2
PIMREG
RASGRF1
ARID3B
SLCO3A1
DEFB108B
GPR157
TJP1
PPP1R12B
ST6GAL1
RBM47
PPM1M
ARHGAP31
CMKLR1
TACC1
ACSS1
TMEM252
SART3
ISCU
LRRC47
P2RY14
MUC13
OGG1
ANXA6
CDCA7L
NPIPB6
ERI1
PARVB
AMN1
TARS3
SLFN12L
ATP1A1
HECTD1
LRP12
RPRD1A
STX10
IER2
NME7
BLZF1
SULT1E1
JUND
NOP53
NAA16
MTRF1
SPOP
NOTCH2NLA
MSGN1
NCF4
CD82
KANSL1L
ALDH2
ZBTB17
SUSD3
GRIK4
TCTN1
PKP2
CX3CL1
ICAM1
ASCL4
WDR41
NSUN6
ARL5B
HNRNPA1L2
ABI1
RAB38
MARCKS
TC2N
SPINK2
FUCA1
TMEM138
CYB561A3
DAZL
B4GALT1
SMARCC1
ITCH
ST3GAL5
KLK1
TIMM17A
LMOD1
CD55
AKNA
IL17A
TRIM8
VWC2
PNPLA5
SIRT1
MEN1
RNF125
PITPNM3
PIK3R6
PSTPIP1
ACTR3
TEX12
IL18
FAM118A
ADD1
ECE1
STRADA
FHAD1
TNFRSF13B
JMY
CCDC113
CD38
ENPP5
SCAMP2
ZCCHC14
NOTCH2
LIME1
ASNS
PCMT1
CCL3L3
CCL3L1
TRIAP1
COX6A1
MAP2K1
SIGLEC5
XBP1
GMEB2
IKZF3
KIF2C
COLEC10
CLUAP1
NLK
GPR141
BCO2
ADORA2A
TNFRSF11B
DNAH10
POU2F3
RNF144A
CLNS1A
CEP68
CELF2
C3orf86
RAB11FIP1
TNIP3
CX3CR1
CORO7-PAM16
CORO7
PPP1R3B
CYRIB
TMED7-TICAM2
TMED7
TRAF3IP3
SHQ1
CLIC5
SMAP2
NPIPB9
CD40
MYL2
IL2RA
CDH17
LAIR1
SBF1
LRRC32
FILIP1L
RARG
ZNF397
IL6R
PLVAP
ITGA4
CD59
HGSNAT
RSBN1L
OST4
TNFRSF14
PIGX
CEP19
EMILIN1
ZNF770
PDP2
CDH1
ARHGAP27
NPIPB8
ARID5B
ZPBP2
UCP3
IL6ST
USP6NL
NPIPB11
GALM
TPST2
CLDN14
SPECC1
PLAT
AFF1
KHK
SMAD3
NUGGC
GNG7
CD1A
WHAMM
FSD2
DUSP2
LOC283710
ABLIM1
MAPK1
EVL
SLC4A4
IGFL3
TEPSIN
NDUFAF8
KIAA0930
TAS2R50
RHOH
FOXO6
DPEP3
GGA2
ELF2
AGK
CDC27
SLC26A11
SGSH
TBC1D22A
RAB36
ASTL
ZFP3
EZR
WBP2
RARA
TNK2
VPS26B
NCAPD3
CSK
RGCC
CP
SLC37A1
RSPH1
ITGAL
GPR65
RSPH14
SLC12A4
ASAH2
CFLAR
LGALS8
ARHGEF35
ZFP69B
C9orf72
C12orf65
STAU2
TTLL12
LILRB1
ATP6V0A1
LIN37
GNA12
ZNRD2
FAM89B
EHBP1L1
SENP3
C1orf162
BCL7A
WDFY1
KRI1
CDKN2D
ENPP2
ARHGEF5
CCDC97
INAVA
H6PD
COPS4
LYPD5
KCNN4
OCSTAMP
CD101
LARS1
USP48
PRPF40B
BMF
KLRK1
PSD4
CLCC1
KIF14
WRAP73
TP73
KIAA0513
XRCC5
GPR171
GPAA1
EXOSC4
ACTG2
KSR1
GRN
SMIM14
APELA
HPSE2
ELMO2
ARF6
LEKR1
C2CD2
DUSP12
CASP8
RNF139
CCDC126
TYW3
CRYZ
TMEM212
CD79A
CALM3
TMEM104
SLC17A7
NAT9
CBLL1
ARHGAP25
NEK6
PIH1D1
ALDH16A1
SLC23A1
MZB1
LEFTY1
LY6E
TP63
GABARAPL1
HEXB
ARHGAP45
CPEB3
RGS3
SSH1
NCOA7
TLNRD1
EVI5
BAK1
RXRA
PROB1
BATF
TLR10
MSC
PIK3R2
WDFY4
STK10
RAB43
SH2B2
SNAI3
TPD52L2
ABHD16B
IQGAP2
CBLB
TNFRSF17
NPIPB2
RMND5B
SIPA1L1
COL4A2-AS2
CCPG1
C15orf65
PPP1R9B
TBC1D14
ANKRD13C
FCAMR
LILRA4
FAM8A1
CYS1
CLDN12
TNFSF4
MS4A1
CHIC2
PDLIM1
DNAJB12
SH3TC1
CD72
CLEC7A
ZP3
MTHFD2
EPB41L2
CCDC130
RGS14
STING1
EPHB2
ABR
CHUK
KDM8
NINJ2
ULBP2
PTPN22
NAGK
SEC61A2
IFNA2
AKAP13
AIP
IPCEF1
TNFAIP8L2
SCNM1
LYSMD1
BHLHE23
SLC1A4
ALOX15
LRRC34
AKR1A1
AICDA
CMTM6
TCF4
LRRIQ4
FILIP1
NGRN
AIM2
SKIL
CD86
NDUFV1
EMB
VPS16
PCED1A
CCDC69
UTP3
IL22RA2
SLFN13
CBFA2T3
COL9A1
POLI
SPATA12
CRYBG1
CCL22