ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190349 | GM12878
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◣ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◢ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

TM4SF4
GLDN
IFNA21
SPATA4
TEX12
IL18
BCO2
EFHB
EXD2
SLC4A4
MGP
DAZL
S100A10
UTRN
TMEM212
EGFLAM
TESC
KLRG1
PKP2
UBE2E1
ABHD12B
WDR24
JMJD8
STUB1
ANK2
ZNF541
TMEM232
MRPS14
NCOA1
POLR3B
VTI1B
ITK
FAM71B
CD28
TTC5
BTRC
TBX19
CLNS1A
LAMC1
TAS2R50
DCP1B
NPIPB11
IL1RL1
PCMT1
CD1A
SMARCAL1
CRTAM
FAM177B
CCDC59
USPL1
HMGB1
USP48
CPEB3
NUDT4B
CDKAL1
MYOM3
HPSE2
NUF2
PLK1
TSHR
RAD52
RNF138
PIP4K2C
BMP5
CCDC124
ACTA1
PARP15
FCHSD1
SH3RF2
GNG7
DUSP6
USP30
LRRC31
FAM160A1
SLC37A3
EIF1B
RSPO4
CCDC130
CCDC138
ZBTB20
STAP1
SBF2
ADM
FAM8A1
DAG1
CLUAP1
VTA1
NMBR
GTF2A2
ENPP3
MED23
PIGK
TMEM115
NPRL2
CYB561D2
LAMC2
TM9SF1
IPO4
MED7
SHISA4
PLAT
ZNF80
PIP4K2A
PLCB1
STBD1
SNX9
RNF144A
CCDC9
MRPL16
LEFTY1
UCP3
YTHDC2
CLECL1
KIF13A
MORC3
PCDH1
MRPS23
DYNC1I2
TNK2
NUP133
TTC23
ITM2B
RORA
CAST
APBB1
THUMPD3
DZIP3
CIP2A
CLDN12
KRR1
NPIPB8
SUGCT
MPLKIP
SYNE1
ARHGEF12
TARS3
DSG3
CHCHD3
EPHB4
NUFIP1
GPALPP1
CUEDC1
CP
SIGLEC5
PLCXD2
FCGBP
EVI5
COMMD1
PLEKHA1
PPFIBP2
SNAP29
PI4KA
ABCD3
ADAP1
OST4
EMILIN1
KHK
COPS4
CD36
ZNF529
C4BPB
HMCES
COA6
RNF135
SAV1
ASIP
TADA1
DLG1
CRK
ALOX5AP
EPYC
SYCP2L
GCM2
HEXB
HYLS1
RGS1
MFF
SLC2A8
LIPH
C3orf86
GPR141
TMEM92
NDUFB8
HIF1AN
ZSCAN31
ZKSCAN3
SIRT4
TMEM208
LRRC29
SORBS1
AMPD3
CTSS
NCBP3
KCNJ15
APP
LRRC49
THAP10
ANKS6
PLSCR2
MMS22L
LIN37
PROSER3
HSPB6
WDCP
NPAS4
CLEC7A
ATP1A1
SYCP3
CCDC110
TP63
DTHD1
PIK3CG
JMY
BTN3A3
CHUK
PPP1R12A
CAMK1
MNX1
GSPT1
RILPL1
NRAP
SPTLC3
SLC1A6
ZBED9
TRIM40
LRRC47
WWTR1
GCNT1
MAP3K13
COMMD3-BMI1
COMMD3
GNPDA1
CATSPER2
RSPH9
MAD2L1BP
GTPBP2
SAP18
ACVR2A
SERPINE3
VPS41
RSPH6A
NCKAP1
RGL4
MCTP1
AGK
NOL4L
ZMYM4
DCDC2
ZDHHC18
DSTYK
GPN1
CCDC121
TMPPE
GLB1
EMB
TEX9
ITGAX
ATP23
ACSL6
CHSY1
NPIPB6
LIPM
LGALS8
OXR1
FBXO7
MYO1F
RNF149
MB
WBP2
CRLS1
TMBIM4
USP22
ATP1A4
NPIPB9
NPIPB5
SNAPC3
KLRD1
LYPD5
KCNN4
CXCL8
ZNF831
AIPL1
PLEKHG1
MMP9
GHRL
C7orf33
FILIP1L
SC5D
DHX8
PSMC2
DNAJC2
EXPH5
SLFN12L
CD55
DPEP3
SLC12A4
OLIG1
NLK
PIP5KL1
DPM2
PECAM1
TTC28
DEF6
KIAA0895L
EXOC3L1
ELMO3
E2F4
NPIPB12
CSTF2T
COX16
HELZ2
ARHGEF3
SPATA12
LRRTM3
NSUN6
ARL5B
LMO7
TASOR
SNTB2
ZNF436
SIM1
CMTM6
SPTAN1
SUN1
CCDC113
C2orf83
GLDC
GTF2B
AFF3
UBC
NPIPB3
NPIPB4
PRKCI
SPINK1
HNRNPA1L2
CFAP54
CCR1
HOPX
SEC22B
NID1
DNAH10
RIN1
BRMS1
BRPF3
CCL15
FUCA1
PLVAP
TMEM267
GPR18
PAFAH2
SLC24A1
ACTR6
UTP3
PSTPIP1
ZCCHC14
ARHGAP15
ZNF230
ZNF705E
DEFB108B
ZNF500
NR3C1
RANBP6
KIAA2026
BID
STARD4
TACSTD2
C12orf42
TCF4
PCOLCE
MOSPD3
NOS1AP
MESP1
IL17RA
SCGB1C2
H3C4
H4C4
H2BC6
GMEB2
COASY
HSD17B1
MLX
CREB5
ZNF518A
GRAP2
ENTHD1
WWOX
PDSS2
EPHB2
GOLM1
PLBD1
CDC27
PCOTH
MIPEP
C1QTNF9B
PTK2
ZNF784
BANK1
ZNF770
CLDN11
TRIP11
UBASH3A
TMPRSS3
GCDH
GTSE1
FAM184A
TTC26
KBTBD6
ELAVL3
RCAN1
CASP8AP2
TJP1
WDR81
GFOD2
SEMA4B
TMCC3
IFNA5
CRYBB1
MRTFA
FGL2
DMXL1
DNAJC5B
SYS1
TP53TG5
PNPLA5
CA13
GTF2I
TMEM53
ARMH1
RNF170
HOOK3
OR8D4
CDCA7L
NET1
SLC26A11
SGSH
DEF8
PGAP1
NCOA7
MRPS22
SMYD4
RPA1
ARL6IP1
GPR65
SDSL
FCER1G
TOMM40L
APOA2
TPM1
SEPTIN2
HDLBP
PRR5
SLC12A3
GPR155
MAL2
PRDM10
VPS72
PIP5K1A
MRPS18C
HELQ
SRM
CD101
GTPBP10
CDK2AP1
FRA10AC1
ARL14EP
HKDC1
H1-2
GPATCH2
NEGR1
LRCH1
FOXO6
BLVRA
RAD18
ASAH2
COL3A1
DAZAP2
THAP12
GVQW3
MIGA1
RTP3
LTF
PLD4
SPDYE13
CCDC50
UTS2B
RGS14
LMAN2
TNKS
NPIPB13
VPS29
RAD9B
LRRC59
CSDE1
RFFL
SHQ1
TNFAIP8L2
SCNM1
LYSMD1
MIA3
TNIP3
ILF3
EHF
JAML
KLHL20
ZNF430
UBR2
ZNF397
KDM3A
OR4D11
ERBB2
PDGFB
ERO1A
BRD3
TTC21B
TBL1XR1
METTL15
KIF18A
ANKRD13C
NDUFV1
ANXA1
RFX1
SACS
IL23R
CNTRL
PANK1
SPOP
ZNF350
NCAPH
R3HDM2
AARS2
NUGGC
ELP3
GNPTAB
TTC21A
GORASP1
GLCCI1
KDM8
ITFG2
PIGX
CEP19
WDR47
ATP12A
TRIAP1
COX6A1
TTC33
KCTD4
OAZ1
JSRP1
NME7
BLZF1
EIF2AK3
ACP5
ELOF1
ABCB1
THAP11
EIF2B5
CHFR
CANT1
TIGIT
CNR1
FZR1
DOHH
MGAT5
ZNF302
CDC42EP1
LY9
WFS1
ENPP2
TPR
ODR4
FAM126A
DMWD
DMPK
LARGE1
MRPL1
ZKSCAN4
NKAPL
NUPR2
CHCHD2
CLN3
APOBR
CCR2
CYP51A1
MS4A6A
COMMD2
KLRK1
ACTA2
C1orf127
ENPP5
ATP5MC2
CNTN1
TSPAN17
ARIH2
HEXA
SAXO1
RRAGA
TSACC
CCT3
ADA
BRIX1
AKAP9
TFPT
PRPF31
PRPF40B
AP2B1
PEX12
UQCRC2
LARS1
DDHD1
LIMS1
NAT10
LONP2
ABCC11
KLF7
CATSPER4
INAVA
TSNARE1
PPM1M
SLC31A1
FKBP15
VPS26B
NCAPD3
C5orf34
MEGF8
BTN3A2
SUSD3
EVC2
EVC
HEATR5B
GPATCH11
FASLG
PTDSS2
METTL9
NSFL1C
GGNBP2
CORO2B
CAND1
NT5C1A
NBEAL2
CCDC12
CTTN
TUBG1
RETREG3
SORT1
RPA3
ZNF19
ZNF791
ZNF490
IFT140
CRAMP1
ZNF501
ADAM22
H6PD
RPL11
CCDC180
PRSS22
RPS8
MARS2
TFAM
PSMC3IP
PPP1R1C
IVD
FAF2
MED31
C17orf100
SLC5A1
RNF139
NPY
WHAMM
FSD2
NSUN3
DHFR2
IPCEF1
REXO2
SAA2-SAA4
SAA2
SAA4
CRNKL1
CFAP61
SIRT1
MTDH
EFNA4
SIKE1
DRAP1
C11orf68
NOXA1
CASP8
ZBTB45
SLC27A5
CFAP20
TMEM252
IL1RN
LGALS2
TMTC2
INTS10
TFF3
C12orf65
LONRF1
CHRNA1
BCL11A
TRIP4
PCLAF
ZSWIM6
GHRH
HNRNPF
IL33
COX6C
NDUFS6
MRPL36
FCRL4
C1orf105
PIGC
ZNF600
PHF20
HCLS1
LRRC34
LRRIQ4
AUTS2
RNF187
SLCO3A1
DPY19L4
SURF6
SLC17A1
RAB38
RAB3GAP1
THAP9
SEC31A
SLC37A1
RSPH1
PCYT1A
PLEKHA6
P2RX5
RIN3
TMCO2
SDE2
FBXO8
CEP44
STAU1
CCDC30
ZMYND12
PPCS
FOXJ3
TANK
P2RY14
HECTD1
COL16A1
LTA4H
LAMB4
CALM3
CYP26A1
RANBP9
SEMA4D
BAZ2A
ATP5F1B
NR4A1
TOX2
SFXN5
UBQLN4
LAMTOR2
MICOS13
HSD11B1L
RPL36
PYDC5
IFI16
SLC38A9
GDPD5
EIF2B2
NOXO1
TBL3
RPS2
RNF151
USH1G
OTOP2
COPZ1
TTC30B
RASSF5
REEP5
SDAD1
H4C3
H1-6
TMEM229B
INTS12
GSTCD
NEURL3
EGR2
ADO
CCIN
CDH1
ULBP2
PTPN22
MIOS
TAPT1
HLA-DOA
CD2BP2
CCR5
COPS8
RCC1L
IFNA6
ZNF563
IFNA13
CDADC1
TTLL12
XPC
LSM3
RNF111
MCFD2
TTC7A
KIF21B
DDX27
TPH2
FBXO17
CCDC146
LIN54
NLE1
UNC45B
MTHFD2
SENP7
STK11IP
ABHD2
RBBP5
ZNRF1
SSH1
ARHGAP30
CBLC
POLR2C
PAXX
CLIC3
TIMM17A
LMOD1
OCSTAMP
APTX
SPECC1
NTN5
HEBP2
DOCK10
TTC39C
CBLL1
MDM4
THOC1
TPCN2
CDYL
CHPF2
ABCF2
ATP2C1
IL18BP
MYO18B
RERE
PRDM1
OGG1
ESYT2
KLHDC4
GPR171
C4orf47
LILRA4
LARGE2
MS4A15
MIA
RAB4B
SPTY2D1
EXOSC9
SERINC2
C11orf24
RNF19B
NCOR1
PIGL
DYNLRB2
DYNC2LI1
GREM1
RHEBL1
KMT2D
LOC645177
C12orf77
C2orf42
PTH2
GFY
ZFYVE28
CFAP99
NEIL1
LAMA3
PSENEN
CDC42EP5
RABGAP1L
ADD1
ZNRF3
TM2D1
DNAI2
IGSF6
ADSL
MS4A14
PDXK
CYBRD1
GTF2F2
GPR35
TAGAP
MAN2A1
MZF1
ASAP1
RNF157
DUSP1
PLAAT2
HAND1
CTLA4
CARD8
ZFPL1
TMEM262
CDCA5
LDLRAD4
DDX60
AP2S1
ARHGAP35
C12orf43
G0S2
BCL2L11
ECI1
CD209
SPATA6L
PLPP6
ALOX15
FFAR2
SCGB1C1
ODF3
HSBP1L1
LILRB1
C2CD2
MACROD2
MEF2A
RRM2B
TEX44
UPP1
TPCN1
IQCD
CD40
ATG5
FHL3
UTP11
PSIP1
PPP1R21
CSNK1G3
SBF1
RIPK3
ADCY4
CBR4
MRPL21
IGHMBP2
GRAMD4
KIAA1217
FXR1
CCM2
YIPF2
TIMM29
PKM
MAFF
CPSF6
ZFP3
FOXN3
CLEC4M
PCDH8
MCC
FCAMR
ITGB3BP
EFCAB7
SNRPB
CD38
KCNE2
DYNC2H1
LMO2
TENT4B
FBXL12
UBL5
PIN1
C16orf72
DDR2
LRP5L
ZNF148
DUS3L
PRR22
GTF2H3
EIF2B1
NOTCH2
RPL22
RNF207
RBM18
MRRF
NLRX1
TTF2
DNAH8
TSG101
SPR
LUC7L
FAM234A
CYRIB
LRRFIP1
WNK1
RAD54B
FSBP
ITGB1
ZBTB43
CEP85L
SSH2
SREK1IP1