ChIP-Atlas: Target genes

Potential target genes for RUNX3

Query protein: RUNX3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5188630 | SNU-484
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RUNX3's Target genes

◢ RUNX3: Average

◢ SRX190349: GM12878

◢ SRX22955455: HGC-27

◢ SRX22955456: HGC-27

◢ SRX22955457: HGC-27

◢ SRX13681305: Lymphoblastoid cell line

◢ SRX13681306: Lymphoblastoid cell line

◢ SRX13681307: Lymphoblastoid cell line

◢ SRX13681308: Lymphoblastoid cell line

◢ SRX19719536: NK-92

◢ SRX19719537: NK-92

◢ SRX19719540: NK-92

◢ SRX19719541: NK-92

◢ SRX5188626: SNU-484

◢ SRX5188627: SNU-484

◣ SRX5188630: SNU-484

◢ SRX5188631: SNU-484

◢ SRX5188634: SNU-484

◢ SRX5188635: SNU-484

◢ RUNX3: STRING

RUNX3
DUX4
BTNL9
CRYAA2
CRYAA
MMP8
DRD4
COL23A1
NCEH1
H3-3A
COTL1
TEX12
IL18
PHRF1
MRPL3
TGFA
RNF112
CD86
FAM106C
NRIP1
DCHS1
TCP11
SAMSN1
GCLC
OR9A4
PRPSAP2
GPX1
ITIH2
DTNBP1
TTC23
B3GNT5
LRRC28
BAGE4
BAGE3
BAGE
TBL1XR1
OR2B6
GCK
USP17L22
USP17L21
USP17L20
USP17L12
KCTD7
GFM1
SPDYE2B
SPDYE2
TMEM61
SENP8
MYO9A
ICA1
MARCHF11
FRMPD2
NBPF1
CNST
TFB2M
MAMDC2
SCAMP1
KIF13A
EPB41L2
ZBTB38
KCNK17
COQ8A
SYT7
OR14K1
OR14A2
TNK1
PKM
MAPK13
GABPA
ATP5PF
CFAP45
VWA3B
ZDHHC7
CBLIF
AFAP1
NFILZ
RALA
SOX9
TAX1BP3
EMC6
CTAG1B
CTAG1A
IFT46
ARCN1
PNRC2
TRIM27
FCMR
ZNF318
RFESD
BAZ2A
ATP5F1B
C21orf91
P2RY1
KDF1
POLR2J3
TREML2
ESR2
GOLGA6L6
SPATS1
GUCA1C
CCL3
CCL3L3
CCL3L1
NFATC4
FOXL3
PPFIBP2
WNT10B
ERO1B
MRPL39
ARF3
TEX22
NOX5
CGA
MECOM
HMG20B
SLC6A3
GIPC3
OR2T1
FRG2C
POU5F1B
TNXB
TSEN54
CASKIN2
RASGRF2
ADGRA1
RSC1A1
RNF44
CDHR2
SPDYE1
KCNE2
PAK1IP1
C6orf52
IQCF2
GZMB
MYO15A
MTRNR2L8
GJA4
DLG1
FRG2
GLCE
RGPD2
RGPD1
JAG2
MLIP
MYOC
TBC1D5
DRC3
TOM1L2
GRPEL1
SPDYE18
LIG3
PNPLA1
CLDN17
SELL
FAM241B
RBM27
ANP32A
PDE1C
MPRIP
CELF4
KRT1
ZNF679
ELK4
CCDC91
CACNB2
VMAC
NDUFA11
AGR3
CRACDL
CPA5
POTEH
CCDC152
KRTAP19-5
KRTAP19-4
KRTAP19-3
KRTAP19-2
KIAA1755
SLC7A14
IL20RB
EGFR
OR12D3
OR5V1
RRAGC
STYXL1
CYP1A2
TMEM71
FGFBP3
NEURL1
ZBTB7C
PLEKHB2
NFIX
EIF5A2
USP16
RWDD2B
ERCC6
NCAM2
OR10AC1
BRD2
KRTAP6-1
KRTAP20-4
KRTAP20-1
ATP2C2
RUVBL1
EEFSEC
MED18
SLC22A8
FAM76A
POLR2H
CLCN2
MYLK4
MBD3L4
MBD3L2
IMPG2
TSBP1
UPP1
EPHA8
ZBED2
CYP1A1
CAMP
C7orf65
RNF165
ITGB8
SMYD3
STK38
TRAPPC9
MAN2B2
KPNB1
OTUD5
SYTL2
KCTD2
ATP5PD
PLD6
UNCX
TMEM204
TARBP2
NPFF
TLE3
EGFLAM
AMPD3
RERE
SLC2A8
CCDC102A
ADGRG5
MIA
RAB4B
GCNT1
NAPA
P2RX5
FAM160A1
CD37
FAM177B
DNAJC5B
CRTAM
SRM
NUDT4B
PTK2
CLECL1
EHF
OLIG1
GLDN
SBF2
ADM
EMID1
DPF1
MYEOV
GPR68
BHLHA15
GSK3B
PLEKHA1
EGR2
ADO
CRK
ALOX5AP
HELZ2
PTAFR
PIK3CG
HNRNPLL
ATP12A
CRYBB1
LMNA
RYK
RUNX1
FMNL3
BTRC
PLK1
CLMN
CLCF1
ABHD12B
GRHL3
CD2BP2
SUCLG2
TPCN2
IFFO2
PTPN6
C12orf57
CNR2
SEPTIN2
HDLBP
SYS1
TP53TG5
ITGAE
IFNLR1
HYLS1
RIN1
BRMS1
UBE2G1
SYTL3
DYNLT1
ZNRF1
RAB3GAP1
ASB2
DENND2D
IL17RA
C12orf42
VPS37C
DDHD1
DEF8
CD44
SNX9
CHST12
DTX2
NIBAN3
LNPEP
KCNK7
ARIH2
BCL3
CTTN
ACTA1
SLC2A5
FCER1G
TOMM40L
APOA2
GCNT2
VOPP1
BID
TTC28
TTC21A
GORASP1
SMYD4
RPA1
TMEM229B
DAG1
SYNE1
WDR74
STX5
RNF111
FCGR3A
LDLRAP1
SNAPC3
WDR81
ALCAM
CEACAM16
EPYC
ARHGEF12
PECAM1
ITK
SPATA4
GPR35
PTH2
GFY
FRA10AC1
FAM71B
ARID5A
ADAP1
IFIT3
GNPDA1
IGLL5
LCP2
FCER2
CD28
RFC2
TRAPPC5
TUBB3
MC1R
LSP1
PMEPA1
CCR1
AIPL1
ZNRF3
IL19
IL10
CYP1B1
CTSZ
SH2B3
KMT2E
GNA13
NDUFS6
MRPL36
HSH2D
FGF2
TSHR
MPEG1
TMCC3
RORA
BLK
KLRD1
HMCES
COA6
TPCN1
IQCD
PIK3CA
GCDH
CYP51A1
LGMN
CLN3
APOBR
IL20RA
FCRL4
RSPH9
VPS37B
TCF7
PARP15
TNIP2
MAD2L1BP
GTPBP2
JAML
SMIM3
NCKAP1
HES1
AFF3
TMEM109
DMWD
PANK1
LYL1
DCDC2
PAXX
CLIC3
RASA1
DOCK10
CDKAL1
CCL4L2
CCL4
SSTR3
PRPF19
AMZ1
TNFRSF10A
FBXO17
WNT1
RAD52
LDLRAD4
RIN3
PDGFB
NT5C1A
ACSL6
SELPLG
ESR1
RAB8A
PSIP1
SPR
SNTB2
SPRED2
FLT3LG
BAIAP2
DMPK
YARS1
S100PBP
CHI3L2
SERF2
MB
PLCB1
LMO2
CUEDC1
PLEKHG6
ZFYVE28
MACC1
TMEM53
ARMH1
UTRN
SEMA6A
TUBG2
SERINC2
LZTFL1
ELL3
SMG6
DGKD
UBE2E1
TUBG1
RETREG3
KCNN3
RABGAP1L
LARGE1
ITGB7
BANK1
PIP4K2A
STK17B
WFS1
RPS3A
TIGIT
RBSN
CFAP54
TTC30B
VPS36
CKAP2
GSPT1
PLEKHG1
FOXN3
TNF
CD209
RASSF5
ADAM22
RFTN1
LTA
LRP5L
SORBS1
LAMC1
SPON2
LIMS1
ARHGEF3
ZNF791
ZNF490
ASAP1
CAMK1
TADA1
TOM1
SLC39A13
PIKFYVE
LOC102724770
DGCR6
SH3BP1
MYH9
HSBP1L1
KCNJ15
SMIM11B
SMIM11A
KLHDC4
MAP1LC3B2
TTC39C
NFKBIZ
RFFL
GRAMD2B
C1orf127
RGS1
PARP1
SLC20A1
MED31
C17orf100
CASP8AP2
SYCP2L
GCM2
CALHM3
RHEX
CRACR2A
USPL1
HMGB1
PRR5
APOBEC3B
MAD1L1
HEXA
JAG1
DMXL2
DTHD1
FCRLB
OXCT2
SRC
RNASET2
PSMC3IP
NDFIP2
MIGA1
CLEC4M
MFF
LAMP3
PDXK
NOP14
GRK4
ATP2C1
CD96
PDE2A
DBNDD1
NTRK2
IGSF6
PLSCR2
UPF1
IL4
GPR132
BIRC3
TOX2
CRLS1
STBD1
ITGAX
RNF170
HOOK3
ADGRG1
FZR1
SLC24A1
DOHH
BMP5
NRROS
MIA3
MGAT5
APBB1
ABCD2
ZNF541
DUSP6
UHRF2
SNX20
SEC14L1
NOD2
PSMA6
PIGV
TSACC
CCT3
GPR25
FASLG
CNIH1
PTPN3
DNAAF1
DERL1
BTN3A2
EAPP
THAP9
SEC31A
TENT4B
SLC5A1
LAT2
TMEM116
ERP29
SLC3A2
ANXA4
ZNF705E
E2F7
CFAP99
CCND3
AAK1
THEMIS2
SEPTIN9
CCDC9
TANK
EFHB
KLRG1
PLD4
MCTP1
ZSWIM6
SMARCAL1
GLDC
LUC7L
FAM234A
C12orf40
BCL2L11
MGAT1
BHLHE40
ACP5
MNX1
PTPN12
NOL4L
FABP5
SZRD1
SUN1
SPTY2D1
CAST
NCOA3
ATP1A4
ZNF302
LAMB4
SLC37A3
ZMYM4
ELOF1
CD226
SYPL1
ADGRE3
MGAT3
SDCCAG8
CEP170
CDC42BPG
CCIN
RASSF2
LAMC2
CYFIP2
PIMREG
RASGRF1
ARID3B
SLCO3A1
DEFB108B
GPR157
TJP1
PPP1R12B
ST6GAL1
RBM47
PPM1M
ARHGAP31
CMKLR1
TACC1
ACSS1
TMEM252
SART3
ISCU
SIT1
LRRC47
P2RY14
MUC13
OGG1
ANXA6
CDCA7L
NPIPB6
ERI1
PARVB
AMN1
TARS3
SLFN12L
ATP1A1
HECTD1
LRP12
RPRD1A
STX10
IER2
NME7
BLZF1
SULT1E1
JUND
NOP53
NAA16
MTRF1
SPOP
NOTCH2NLA
MSGN1
NCF4
ATAD2B
CD82
KANSL1L
ALDH2
ZBTB17
SUSD3
GRIK4
TCTN1
PKP2
IER3
FLOT1
CX3CL1
ICAM1
ASCL4
WDR41
NSUN6
ARL5B
HNRNPA1L2
ABI1
TAGAP
EMP3
CCDC114
RAB38
SRSF5
ESYT2
MARCKS
TC2N
SPINK2
FUCA1
TMEM138
NOTCH2NLC
CYB561A3
DAZL
B4GALT1
SMARCC1
ITCH
ST3GAL5
KLK1
TIMM17A
LMOD1
CD55
AKNA
IL17A
TRIM8
VWC2
PNPLA5
SIRT1
MEN1
RNF125
PITPNM3
PIK3R6
PSTPIP1
CLN5
ACTR3
FAM118A
ADD1
ECE1
ZNF341
STRADA
FHAD1
TNFRSF13B
JMY
CCDC113
CD38
ENPP5
SCAMP2
ZCCHC14
NOTCH2
LIME1
ASNS
PCMT1
ICE2
TRIAP1
COX6A1
MAP2K1
SIGLEC5
XBP1
GMEB2
IKZF3
KIF2C
COLEC10
CLUAP1
NLK
GPR141
BCO2
ADORA2A
TNFRSF11B
DNAH10
POU2F3
RNF144A
CLNS1A
CEP68
CELF2
C3orf86
RAB11FIP1
TNIP3
CX3CR1
CORO7-PAM16
CORO7
PPP1R3B
CYRIB
TMED7-TICAM2
TMED7
TRAF3IP3
SHQ1
CLIC5
SMAP2
NPIPB9
CD40
MYL2
IL2RA
CDH17
LAIR1
SBF1
LRRC32
FILIP1L
RARG
ZNF397
IL6R
LTBP2
PLVAP
ITGA4
CD59
HGSNAT
RSBN1L
OST4
TNFRSF14
ANXA5
PIGX
CEP19
EMILIN1
ZNF770
PDP2
MYCBP2
CDH1
ETFB
ARHGAP27
NPIPB8
ARID5B
ZPBP2
UCP3
IL6ST
USP6NL
NPIPB11
GALM
TPST2
CLDN14
SPECC1
PLAT
AFF1
KHK
SMAD3
NUGGC
NKG7
CLDND2
GNG7
CD1A
WHAMM
FSD2
DUSP2
LOC283710
ABLIM1
GTF2A2
MAPK1
EVL
SLC4A4
RBM38
IGFL3
TEPSIN
NDUFAF8
KIAA0930
TAS2R50
RHOH
FOXO6
DPEP3
GGA2
ELF2
AGK
CDC27
SLC26A11
SGSH
TBC1D22A
RAB36
ASTL
ZFP3
EZR
WBP2
RARA
TNK2
VPS26B
NCAPD3
CSK
RGCC
CP
SLC37A1
RSPH1
ITGAL
GPR65
RSPH14
ZYG11B
SLC12A4
ASAH2
CFLAR
LGALS8
ARHGEF35
PJA2
TFAM
ZFP69B
FKBP5
C9orf72
C12orf65
STAU2
TTLL12
LILRB1
ATP6V0A1
LIN37
GNA12
ZNRD2
FAM89B
EHBP1L1
SENP3
C1orf162
BCL7A
WDFY1
KRI1
CDKN2D
ENPP2
ARHGEF5
CCDC97
INAVA
TPR
ODR4
H6PD
COPS4
LYPD5
KCNN4
OCSTAMP
CD101
LARS1
USP48
PRPF40B
BMF
KLRK1
DSTYK
PSD4
CLCC1
KIF14
WRAP73
TP73
KIAA0513
NOTCH2NLB
XRCC5
GPR171
GPAA1
EXOSC4
ACTG2
KSR1
GRN
SMIM14
APELA
HPSE2
ELMO2
ARF6
LEKR1
C2CD2
DUSP12
CASP8
RNF139
CCDC126
TYW3
CRYZ
TMEM212
CD79A
CALM3
TMEM104
SLC17A7
NAT9
CBLL1
ARHGAP25
NEK6
PIH1D1
ALDH16A1
SLC23A1
MZB1
LEFTY1