ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1054887 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◣ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Mindy4
Nufip2
Zfp800
Med25
Nhsl1
Dhx32
Mrpl28
Pcyt1b
Eif5a2
Stk11ip
Rspry1
Psme3ip1
Pou2f1
Lrrn2
Tnrc18
Abca4
Rabl3
Gtf2e1
Il18
Bco2
Mlc1
Dhrs3
Msi1
Eif1ad
Banf1
H4f16
Phf23
Surf6
Cpsf6
Prdm12
Zfp623
Slc45a3
Kazald1
Fgd4
Vldlr
Polr3k
Zfp9
Insm1
Ptbp1
Mmut
Cenpq
Zscan22
Sybu
Vax1
Myo10
Tmprss11e
Tbc1d22a
Clasp1
Lingo2
Epc1
Ska2
Prr11
Zmym4
Zfp428
Khsrp
Polr2e
Ttc41
Hsp90b1
A2m
Nfkbiz
Lmo3
Epb41l5
Nudt13
Ptger2
Lix1
Mafb
Sap30bp
Recql5
Pcnx3
Map3k11
Gtf2ird1
Pkdcc
Mettl8
Dcaf17
Tle4
Acaa1a
Myd88
Hsbp1
Tprgl
Lmo1
Adnp
Kdm2b
Hpgd
Psat1
Krr1
Mecp2
Camk2a
Rhobtb2
Clu
Bmpr1b
Ccdc177
Nemf
Xxylt1
Ermn
Poc5
Senp7
Fsbp
Ankrd40
Rnh1
Zfp180
Kmt5c
Med6
Alg8
Ctbp2
Zfp574
Slc1a5
Virma
Sec61b
Alg2
Actr1a
Asf1b
Cwc22
Dipk1c
Drosha
6030458C11Rik
Pigo
Zfp729a
Hscb
Chek2
Mzf1
Naa50
Atp6v1a
Ppia
Mdm1
Calr3
1700030K09Rik
Psmd11
Gm5165
Polg
Clcn3
Cep120
N4bp2l2
Trim35
Pipox
Ccdc12
Sorbs2
Mrpl23
Snrpc
Tet3
Lmln
Rpl13a
Arfip1
Rtn4
Tle3
Btbd17
Arih1
Mtus1
Slc38a9
Myt1
Zfp386
Helt
Dhrs7b
Pdgfra
Rpf1
H2bc4
H2ac6
Cntn6
H4c18
Ifrd2
Sft2d1
Trim11
Polr3b
Riok2
Tysnd1
Klhl18
Kif9
Mphosph8
Rcn3
Slc35b1
Arvcf
Vps28
Zswim1
Tigd2
Stk35
Asmt
Adgrv1
Btbd8
Dcaf11
Sec13
Neurl2
Ctsa
Prrx1
Numa1
Pld1
Psd3
1700113H08Rik
Sv2b
Rgs13
Gng2
Ndst1
Tspan9
Mylpf
Tbc1d10b
Tmx1
Gm973
Oma1
Six3
Hexim1
Ing2
Inip
Rfx4
Lrr1
Polr3h
Arhgef10l
Dusp6
4833420G17Rik
Knl1
Rpusd1
Chtf18
Grcc10
Dennd2a
Cox7a2l
Zfp608
Ankrd29
Imp4
Ccdc115
Clasp2
Tspan17
Mrps28
Nup205
Camk1g
Eef1a1
Fam118a
Sat2
Plpp3
Marcks
Itfg2
Kdm4a
Mtf2
Gba
Pip4p2
Yipf1
Lrp8
Thyn1
Acad8
Ostc
Prmt3
Rbm12b2
Srek1
Znrd1as
Znrd1
Abcf2
Atp5mpl
Thoc3
Prickle2
Hacd3
Usp39
Hnrnph1
Zfp622
Cdk12
Prcc
Txnl4b
Dhx38
Luc7l
Urm1
Zfp960
Maz
Zkscan5
Bcar3
Klhl9
Nupl1
Emc7
Tmem47
Ccpg1os
Ccpg1
6720489N17Rik
Mob3a
Izumo4
Adamtsl1
Rab7
Igf2bp3
Spop
Twistnb
Ascc3
Tmem218
Cntln
Men1
Psma1
Uchl1
Slc39a9
Erh
Prepl
Camkmt
Lrrtm2
Sema4c
Ndufb4
Itgbl1
Camsap1
Smpd4
Hunk
Bfsp1
Cdk1
Med23
Phf5a
Aco2
4930583I09Rik
Lypd4
Dmrtc2
Anp32e
Zfp317
Tcf4
Ell2
Trib1
Slc18a1
Atp6v1b2
Cwc25
Nat14
Nifk
Ints12
Gstcd
Itgb8
Peak1
Hmg20a
Rcan1
Ccdc190
Wdr95
Tmem219
Rps8
Flcn
Pprc1
Fabp7
Syncrip
Tecr
Oasl1
Noct
Gm6712
Ube2b
Ttll9
Scg2
Tgif1
Igsf10
Srsf11
Lrrc40
Ppp1r9a
Abcd2
B4gat1
Tm2d2
Adam9
Seh1l
Lmo2
Nsun5
Sec22a
Mvd
Sfswap
Utp3
Wdr33
Ppan
Gas1
Sc5d
Stap2
Mpnd
Tomm20
Aff4
Zc3hc1
Rplp2
H4c17
Celf2
Mbnl2
Ccdc194
Mettl3
Pcdhgc4
Eif3f
4930402H24Rik
Gm51425
Gse1
Polr2a
Ints9
Hmbox1
Spsb4
Os9
Cenpu
Phactr1
Fam181a
Gucy1b2
Fgf7
Mterf1a
Dnajc16
Rps7
Plekhg1
BC107364
Kif18a
Cdipt
Cdiptos
Kcnmb2
Glmp
Fam149a
Ubxn6
Hdgfl2
Rps11
Acyp1
Dhx8
Laptm4a
Map2k6
Trak1
Dct
Coq8a
Hnrnpul1
Riok3
Phc2
Rest
Zfand6
St7
Fmn2
Lpxn
Zfp91
Nat8
Ybx1
Ubp1
Acaa2
Srp68
Zcchc7
Ednrb
S1pr1
Agbl5
Eif3d
Usp1
Ctdp1
Lrfn5
Krtap3-3
Snrpd3
Gucd1
Trp53bp1
Ankhd1
Arx
Amt
Nup85
Pcdh8
Enpp3
Dab2ip
Snapc2
E2f2
Phc1
Ric8b
Kat7
Rps29
Fgfbp3
Dcn
Lpar4
Amn1
Prkacb
Elmo2
Thada
Lrrtm3
9430015G10Rik
Rufy3
Bcl9
Rpl32
Ptrhd1
Cenpo
Add1
Gapdh
Pnn
Nvl
Thap2
Prkcq
Cstf3
Mad2l1
Phf12
Lin7c
Siah3
Homer3
Kmt2d
Scrn2
Evi5l
Psmf1
Ppip5k2
Gin1
Trafd1
Alyref2
Stc1
Chmp2a
Gas8
Cibar2
Lpin2
Pmch
Ranbp3
Tafa5
Slc9a5
Fhod1
Ctnnb1
U2af2
Usp31
Zmynd8
Cand1
Arhgef19
Tcof1
Rgs8
Gm5148
Creb5
Rrnad1
Isg20l2
Zeb2
Rab3ip
Tlx3
Kyat1
Tbc1d9
Zfp605
Sp2
Tuba1a
Tcp11
Zbtb38
Cs
Rnf5
Ago2
Npepps
Med16
Sspn
Cbx5
Tspan31
Bcl11b
Tomt
Lamtor1
Fxn
Cnot1
Miga1
Tnks2
Cipc
Hnrnph2
Gla
Atp6v1f
Dhx16
Ccp110
Tdrd7
Smim19
Slc20a2
Spink10
Fbxo38
Rad51ap1
D6Wsu163e
Uprt
Rhoj
Gjb1
Cenpm
Arhgap15
Cdk19
Ascc1
Anapc16
Nucks1
Mfap3l
Pnkd
Rhpn1
Fndc3b
Ltbp1
Grip1
Erich1
Ezh2
Trmt112
Prdx5
Poldip3
Tgfb3
Mob1b
Nolc1
Msantd4
Spry2
Ddx19a
Wls
Tmem201
Ccdc171
Irgq
Spata7
Zbtb18
Itpr1
Ptprg
Psmd5
Plin3
Alpl
Snapc5
Ptma
Ccnl2
Pan2
Zfp869
Vps33b
Gpx8
Tagln3
Mpv17l2
Ttc25
Rbm6
Ubxn4
Akirin2
Mtr
Ttc9c
Hnrnpul2
Uvrag
Slc4a2
Cabcoco1
Xrn2
Lman2
Sigmar1
Exosc4
Hspa9
Smim7
Naaa
Hjurp
A730008H23Rik
Zfp955b
Sumf1
Jdp2
Zfp369
Ndufa3
Nudt5
Cdc123
Poc1a
Oscar
F8a
Supv3l1
Fam110b
Vcam1
Sp1
Ints6
Arhgef17
Rps19
Pemt
Gabpb2
Zfp871
Cep170
Arhgap26
Sdccag8
Flrt3
Nacc2
Ahctf1
Bet1
Tube1
Fam229b
Glipr1l1
Sash1
Hmga1b
Hmga1
Fyco1
Armc8
Gadd45g
Tmed10
Pard3
Bend3
H2bc14
Setd1b
Ambra1
Uba1
Oxr1
Pde1a
Rpl9
Lias
Zzef1
Cyb5d2
Med24
Strip1
Zbtb5
Ankrd6
Ddr1
Ppp4r2
Hip1
Tcf3
Tnpo2
Ttc32
Zfp354b
Mtmr2
Mepce
Zcwpw1
Vmac
Ndufa11
Ube2cbp
Klhl5
Wdr6
Gripap1
Sac3d1
Prdm4
Kctd5
Dpy30
Stoml2
Fuca1
Nop53
Zfyve28
Cfap99
Tonsl
Nucb1
Cyp2j9
Frrs1
Sf3a1
Ccdc157
Zfp454
Acad12
Decr1
Arl4d
Plekhh3
Zfp46
Def8
Atg4c
Taf6l
Coq8b
Adgrb2
Proser1
Nhlrc3
Esrrg
Tril
Arhgap11a
1700008O03Rik
Aptx
Sp5
Hdac9
Tti2
Gldc
Tacr1
Arnt
Tma7
Ccdc51
Mlf2
Zfp444
Zfp738
Tufm
Mycn
Pcdh18
Slc26a7
Phyhipl
Zbtb6
Rufy1
Sbk1
Sms
Foxj1
Rdm1
Zfp13
Tbc1d32
Cnot6l
Hdac1
Cc2d1b
Larp4
Sema4b
Uqcrq
Zyg11b
H4c1
H3c1
Tef
Kbtbd8
Ddrgk1
Map2k7
Tars
BC049762
Clk4
Cfdp1
Tcea1
Txndc12
Btf3l4
Zfp146
Tsacc
Cct3
Tstd2
Ncbp1
Mageh1
Srpk2
Selenot
Leprot
Abcc10
Trdmt1
Tpmt
Kdm1b
Slx4ip
Mkks
Wwox
Nsa2
Gfm2
Tmem131l
Mrps11
Mrpl46
Fem1b
Naa16
Lsm4
Ipo11
Ccdc107
Helb
Pcf11
Edn1
Zfp260
Fzd1
Mcf2l
Dad1
Abhd4
Cops4
Arhgap42
Sarnp
Ormdl2
Tmem29
Zfp773
Ctnnal1
Nwd1
Kcnip3
G2e3
Marchf6
Stx5a
1700092M07Rik
Pramel12
Tcf12
Mypop
Dock9
Nup153
Pop7
Donson
Vcp
Lgals12
Cyyr1
Ptgr2
Heatr1
Rad54l
Jmjd1c
Poglut3
Rps26
Zfp457
Bcl2l12
Anks1b
Cntn4
Arhgap32
Leng8
Rpl23a
Hmx3
3300002I08Rik
Entpd1
T2
Wdr76
Mfap1a
Lpar2
Sox4
Gpx4
Dlx1
Prcp
Ddias
Ttc21b
Cr1l
Scn2a
Ppt1
Hspa4
Abhd8
Mrpl34
Taf5
Rragd
Ccni
2010109A12Rik
Gtf3c6
Zcrb1
Pphln1
Magi1
Castor2
Gss
Fbxo36
Uros
Bccip
Clec2d
Rcbtb1
Tmem109
Cdk5
Arid4a
Taf6
Cnpy4
Pigc
4930558K02Rik
Mxd4
Retsat
Elmod3
Gpr89
Ttc33
Mvb12a
Dpp6
Tcerg1
Ints10
Shd
Commd4
Ptges2
Scnm1
Lysmd1
Psmd1
Stil
Mpdu1
Nlk
Vit
Pkm
Plekhg2
Nrde2
Tmed7
Eif1a
Nckap5
Gadd45gip1
Rmnd5b
Nsmce3
Dcaf10
Polr3e
Dolpp1
Wdr55
Smarca2
Lhx6
Mcts1
Zfp870
Gpm6a
Limch1
Kctd13
Gm38396
Usp48
Metap2
Atad2
Taf13
Slc35a1
Ppp1r10
Fbxl19
Slc31a1
Fkbp15
Snx11
Etv5
Tdrkh
Cntnap3
Ccdc126
Derl1
Qrich1
Hexim2
Rbm34
C330018D20Rik
Tbc1d14
Nsun4
Tpd52
Dnal4
Chrm4
Abhd11
Rbm42
U2af1
Syn3
Kdm4d
Cwc15
Ube2j1
Ctu1
Chkb
Edaradd
Rapgef2
Zfp207
Sema3a
Mrpl11
Fbxo15
Nrf1
Hax1
Sox8
Gadd45a
Timm21
Nucb2
Lsg1
Med13
Trmt2a
Ranbp1
Prdm9
Idh1
Pafah1b3
Pikfyve
Tjp2
Hlf
Rnf10
Aatf
Katnal2
Cldn22
Shc3
Spr
Arhgap28
Rangap1
Cfap20
Kbtbd3
Aasdhppt
Otub2
Mthfs
Zfp128
Pde4b
Tmed1
Ddx56
Cep112
Zcchc8
Syne2
Tiam2
Qtrt2
Ccdc191
Upf3b
Tasp1
Selenos
Cop1
Marf1
Spag9
Selenoh
Zfand4
Wdr12
Carf
Rnf122
Mfap1b
Ank2
Rap1gds1
Slc25a18
Megf8
Ing1
Gpn3
Fam216a
Abhd1
Cenpc1
Ccdc9b
Fam193b
Ing4
Dele1
Cdkn2d
Lclat1
Sec23ip
Denr
Wdr77
Atp5pb