ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450552 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◣ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Qrich1
Styxl1
Mdh2
Kmt2a
Scamp5
Cdk12
Wdr77
Atp5pb
Rbm39
Ireb2
Mapk14
Eif4a3
Mcts2
Akap11
Psmd5
Banp
Naa35
Rraga
Ube2d3
Arf3
Hspa4
Dnajb4
Fubp1
Golm2
Stxbp4
Cox11
Ankfy1
Ercc6l2
Tigd2
Micos10
Mms22l
Efs
Nsun3
Zzz3
Herc1
Dhrs3
Marchf7
Eif5a2
Mrpl28
Smarca5
Srek1
Tspan17
Zkscan2
Slc25a11
Rnf167
Zcchc14
Supt5
Rabl3
Gtf2e1
Ell2
Zbtb2
Rspry1
Psme3ip1
Myef2
Btbd10
Stk11ip
Arfip1
Rpl7a
Med22
Abcf2
Calr3
1700030K09Rik
Spdl1
Zfp623
Uhrf2
Mphosph8
Adnp
Lsm14a
Epb41l5
Spsb3
Nubp2
Edrf1
Rps19
Pou2f1
Puf60
Surf6
Eif1ad
Banf1
Homer3
Atp5mpl
Polr2e
Ssbp4
Ttc14
Polr3k
Tprgl
Tmem47
Ddhd2
Nudt1
Nfkbiz
Creld2
Alg12
Nptn
Phc2
Stk38
Zfp960
Cpsf6
Ska2
Prr11
Mbd6
Fam76a
Hscb
Chek2
Ppp4r3b
Khsrp
Mob1a
Coq9
Ciapin1
Mettl8
Dcaf17
Tubgcp5
Adgrv1
Lmln
Smim10l1
D1Pas1
Map3k7
Naa38
Cyb5d1
Gtf2ird1
Get4
Ppard
Caprin2
Acaa1a
Myd88
Uspl1
Dynll1
Upf3a
Slc1a5
Tomm20
Virma
Drg1
Cstf3
Rps7
Dhx32
Ttc41
Hsp90b1
Lpxn
Zfp91
Gdf5
Trappc2
Ofd1
Dlc1
Dgke
Vdac3
Ccz1
Zfp574
Wdr27
1600012H06Rik
Drosha
6030458C11Rik
Rab6a
Prdx1
Hip1
Mfsd8
Rnf4
Yod1
Snrpd3
Gucd1
Srsf10
Lamp1
Aip
Tmem209
Ssmem1
Tmem134
Zfand3
Prss48
Rims3
Tmco1
Dennd2a
Kazald1
Med16
Ndufaf3
Icmt
Wdr6
Ifrd2
Cs
Trim35
Ctnnb1
Frzb
Xxylt1
Npepps
Cep170b
Eif5
Stag3
Gpc2
Tysnd1
Fam135a
Mcfd2
Sf3a2
Plekhj1
Shroom3
Gm5165
Rnpc3
Nifk
Rbm26
Abhd18
Atf7
Smim7
Asxl1
Rab43
Mrps14
Nupl1
Zyg11b
Cdc5l
Zfp566
Mllt6
Mtf2
Ptpn4
Phf23
Srsf11
Lrrc40
Trim11
Uqcrq
Cul5
Zmym4
Mymx
Vezf1
Trp53bp2
Tmem191c
Seh1l
Mrps28
Nudt13
Chuk
Zfp386
Anp32e
Psmb2
Etfa
Relch
Pign
Ptrhd1
Cenpo
Fam219a
Dnaic1
Mindy4
Zbtb40
Slc25a4
Tnip2
Sfi1
Zfp78
Dars
H4f16
Erich1
Smg5
Npc1
Huwe1
Clba1
Cwc25
Gm3173
Stk38l
Sap30bp
Recql5
Zfp180
Dazap1
Dbr1
Ncoa4
Map1b
Kdm2b
Ryr2
Tomm7
Atf2
Tlk2
Siva1
Sp1
Rps3a1
Crebzf
Donson
Dut
Zscan22
Ankrd40
2610528J11Rik
Pop7
Rmnd5b
Larp4b
Kif2a
Exo5
Rab33b
Ggnbp2
Naaa
Lta4h
Cox6b2
Tpmt
Kdm1b
Vps28
Psma1
Mmut
Cenpq
Micu2
Actn2
4930447C04Rik
Cd9
Krr1
Kctd19
Lrrc36
Asph
Zmym3
Thada
Ankhd1
Rtn4
Ncoa2
N4bp2l2
Riok2
Mapk8
Slc5a6
Atraid
Mob1b
Gpr157
Clasp1
Tcf3
Porcn
Sap18b
Sap18
Glcci1
Rc3h2
Dzip3
Cip2a
Stk35
Rfesd
4833439L19Rik
Znrd1as
Znrd1
Wdfy3
Tmem143
Syngr4
Arl2bp
Fzd6
Supt16
Thrb
Myo10
Cul3
Cox7a2l
Slc38a9
Ube2e3
Slc39a9
Erh
Cnot3
Gm3667
Mars1
Mettl3
Rbks
Babam2
Cep85
Pih1d1
Aldh16a1
Lman2
Mysm1
Spsb4
Zfp53
Ints6
Etfrf1
Casc1
Mtmr9
Sspn
Yif1b
Vmn2r12
Zfp622
Zfp609
Thap7
Haspin
Rpl10a
Tcf25
Msi1
Kctd7
Heatr1
Pcca
Smarcd2
Plekhb1
Nkx3-1
Idh1
Pikfyve
Nsmce3
Ccdc186
Gm3696
Nup205
Chmp2a
Trim24
Rpl26
Lrba
Ptgr2
Pibf1
Dis3
Rnh1
Ksr2
Klhl18
Kif9
Npm1
Rictor
Osbpl2
Spr
Rps28
Ndufa7
Bambi
Rpusd1
Chtf18
Rpl12
Lrsam1
BC107364
Add1
Utp3
Mad2l1
Gm51425
Tab1
Rab7
Spp1
Ostc
Ing2
Pcyt1b
Tmeff1
Pcmtd1
Utp6
Smim27
Luc7l2
Trrap
Sec23ip
Glce
Gas1
Nktr
Septin7
Pigo
Slc30a6
Os9
Ifitm1
Ssbp1
Hells
Exosc10
Smdt1
Arl15
Spag16
Pradc1
Cct7
Zfp13
Cdipt
Cdiptos
Ints12
Gstcd
Poc5
Flcn
Nsd3
Tmem218
Vcl
Gps2
Cep70
Cenpb
Tpr
Odr4
Csnk1g3
Otub2
Lrrn2
Dnajc27
Pemt
Prrt3
Fnbp4
Med13
Nt5dc3
Rbm14
Gm21992
Mettl16
Sec62
Elovl5
H4c1
H3c1
Sde2
Agl
Cactin
Tbc1d14
Smc1b
Hck
Zfp286
Hvcn1
Ybx1
Med23
Tspyl1
Tmem18
Pafah1b3
Mterf1a
Scg2
Il18
Bco2
Atad1
Zc3h4
Sft2d1
Fbrsl1
Magi1
Fbxo27
Lrif1
Eif4e1b
Ndufa12
Gm3448
Gm3417
Tcte3
Gm3435
Psph
Cct6a
Trim59
Grb2
Dad1
Abhd4
Actr1a
Slc35b1
Cnot6l
4833420G17Rik
Pcnt
Imp4
Ccdc115
Thoc3
Jdp2
E030030I06Rik
L3mbtl2
Zfp523
Stil
Kin
Atp5c1
Nsun4
Rps8
Phf10
Mbtps1
Ppp1r9a
Zfyve19
Dnajc17
Ermard
Gdi2
Ahctf1
Clcn2
Gpbp1
Kcnb1
Ikzf5
Acadsb
Rps6
Phyhipl
Tmem129
Tacc3
Mre11a
Ankrd49
9030025P20Rik
Rtkn2
Aftph
Ranbp3
Cfap298
Prdm10
Usp53
Tmx3
Snx11
Aptx
Rnf212b
Ska3
Mrpl57
Sec61b
Alg2
Cox16
Dusp6
Copb2
Slc25a36
Zfp428
Tep1
Zbtb22
Khk
Jade1
Mib2
Sco2
Ubr3
Chaf1a
Lonp2
P3h1
AU022252
Msrb2
Ctbp2
Tecr
Lrpap1
Cenpu
Nrbf2
Tmem183a
Mrtfb
Rhbg
Capn1
Gtf2a1
Pym1
Luzp1
Plxdc1
Tjp2
Dcp1a
Fbxo11
Kmt2d
Snx18
Kbtbd8
Dctn2
Zc3h6
Papolb
Men1
Por
Tas1r1
Nol9
Slc15a4
Gba
Pifo
Srsf7
Lactb
Rnf103
Gpr19
Rpl13a
Mppe1
Nop14
Grk4
Asf1b
Snrpc
Zfp808
Terb2
Patl2
Tbc1d32
Camsap1
Ccdc63
2610042L04Rik
Yy1
Atp6v1f
Med6
Araf
Leprot
Zdhhc17
Hmgb2
Ikbip
Apaf1
Smim26
Chmp5
Bag1
Isl1
Ccnb1
Gapdh
Txnl4b
Dhx38
Ramac
Rpl9
Lias
U2af1
Degs1
Ppp2r3a
Prcp
Ddias
Armcx1
Cadps
Fbxo15
H2bc4
H2ac6
Gm3558
Ppp2ca
Zfp972
Slc27a1
Dppa5a
Tcea1
Galnt16
Etfbkmt
Trip4
Csnk1g1
Slc39a7
Rxrb
Prepl
Camkmt
Rnf11
Spata33
Chmp1a
Cdk7
Polr3b
Lima1
Paxx
Ube2cbp
Wfs1
Slx4ip
Mkks
Itfg2
Ppp1r2
Glmp
Cry2
Hmgxb3
Dguok
Trpc1
Thyn1
Acad8
Sergef
Nsd1
Rrs1
Mrpl40
Hira
Polr1b
Mylpf
Tbc1d10b
Rad54l
Rpf1
Zfp219
Trp53bp1
Cdk19
Dffa
Gpcpd1
Polr2b
Noa1
Mad2l1bp
Wwox
Tbp
Inpp5a
Gjc1
Pnn
Gpr89
Mafb
Nbeal1
Cep350
1700113H08Rik
Stn1
Scaf4
Abhd17c
Ints9
Hmbox1
Gripap1
Carmil1
Zcrb1
Pphln1
Pnpla6
Pdlim1
Eef1a1
Eefsec
Hnrnph2
Gla
Snx5
Mgme1
Cops4
Rab5c
Pard6b
Rfx1
Dtx2
Kbtbd3
Aasdhppt
Eif4a1
Ccnyl1
Evi5l
Trim37
Ezh2
Chrm4
Mis18bp1
Rpp38
Rab38
Mpv17l2
Slc39a14
Vav3
Fam161a
Zfp605
Abi1
BC004004
Ogdh
Srsf1
Gsc2
D5Ertd579e
Matr3
Pou3f1
Nfkbil1
Atp6v1g2
Map4k1
Eif3k
Lsm4
Brf1
Pard3
Xrra1
Spcs2
Tab3
Nudt2
Kif24
Nanog
Prcc
Rbm48
Pex1
H4c18
Tma7
Ccdc51
Map3k12
Sec63
Rapgef6
Cdkn2aipnl
0610040J01Rik
Atp6v0d1
Prdm4
Vps4b
Gabpb2
Ubxn6
Hdgfl2
Zfp978
Twistnb
Gas8
Pou4f1
Zfp317
Nkap
Mtss2
Snrnp70
Icam4
Cd2ap
Zc3hc1
Qk
Thap11
Abcb1b
Kif18a
Mterf1b
Zkscan5
Arhgap28
Kctd5
Col13a1
Ddrgk1
Cct5
Atpsckmt
Nrf1
Tcp11
Arx
Enpp3
Fgd4
Tnrc6b
Zfp512b
Arhgap12
Haus4
Zfyve28
Cfap99
Taok1
Nanp
Nup93
Pbld2
Hnrnph3
Slc7a3
Prkar1b
Dnaaf5
Tspan9
Farsa
Ccnj
Rnf8
Gm33933
Cdk1
Eno1
Emc7
Snx12
Septin9
Rnf166
Ctu2
Cntnap2
Ncl
Wdr73
Ercc5
Zfp819
Rmdn3
Dusp13
Ptges3
Lgr6
Megf8
Igfbp2
Vmac
Ndufa11
Mphosph6
Dnal4
Prmt3
Mzf1
Rrnad1
Isg20l2
Tmem87a
Ganc
Cbx1
Myo6
Zfp120
Alg8
Sugp1
Mau2
Clec12a
Gpx1
Tdp2
Acot13
Suv39h1
N6amt1
Arhgap26
Akap13
Med1
Cdc20
Ttc32
Sec13
Ino80
Sipa1l1
Ccdc194
Josd2
Gltp
Sac3d1
Synm
Maz
Zdhhc5
Traf2
Cers4
Tmem154
Coq8a
Adpgk
Rest
Itgb6
Zfp346
Rps23rg1
Atl3
Mettl1
Eef1akmt3
Vps18
Zzef1
Cyb5d2
Mxd4
Ccdc12
Cpd
Rpl22
Pacsin1
Insr
Msrb1
Thoc1
Npc2
Isca2
Trappc12
Fadd
Zfp184
Gclm
Ssbp2
Abhd11
Ttc25
Uvssa
Hspbp1
Pcnx3
Map3k11
Zfp493
Pip4k2a
H3c15
H3c14
H2ac19
H2ac18
Slc35e1
Ralbp1
Mad2l2
Nop53
Vmn1r86
Erf
Nepro
Lrr1
Rbm42
Nfe2l2
Vcp
Zfp97
Ehd1
Polr2f
1700088E04Rik
Hsbp1
Mxd1
Trmt112
Prdx5
Mgat4a
Nup133
Atg4d
Rundc3b
Hsd17b12
Ipo11
Tuft1
Psen1
Pfas
Yipf3
Polr1c
2410137M14Rik
Srp19
Vmp1
Ptrh2
Slc35e3
Nat10
Strip1
Cbll1
Bag6
Plekhg2
Stoml2
Senp2
Lmo2
Rapgef1
Tmem135
Fzd4
Hjurp
A730008H23Rik
Crot
Hdgf
Nek2
Gm3739
Mthfs
Sfxn2
Arl3
Stat3
Gm2237
Coq10b
Fdxacb1
1110032A03Rik
Trim71
Gramd3
Caml
Rbm6
Zfp446
Rpgrip1l
Fto
Gpr155
Rab3ip
Txnrd1
Atg16l2
Cfap20dc
Qtrt2
Ccdc191
Lhx9
Gm3604
Pnpla3
Rab4b