ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499117 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◣ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Ccdc110
Cdk12
Ercc6l2
Wdr77
Atp5pb
Styxl1
Mdh2
Dhx8
Faap20
Mrpl28
Lrrn2
Psmd5
Mtf2
Rbm39
Supt5
Tmem270
Denr
Ankrd39
Pcdhga12
Zfp317
Qrich1
Porcn
Nop14
Grk4
Rraga
Eif4e1b
Stk38
Trappc3
Mib2
Snrpe
Phc2
Dhx32
Micos10
Lima1
A2m
Ahcyl1
Ccdc88c
Rc3h2
Tnfrsf21
Prdm14
Lif
Mapk14
Slc26a8
Lrpap1
Gjc1
Mterf1b
Tmem14a
Scamp5
Gprc5b
Cst3
Zfp42
Eif1ad
Banf1
Vps18
Gdf5
Mterf1a
Timm22
Polr3k
Slc7a3
Vav2
Ireb2
Mettl16
Cstdc2
Abcf2
Rac3
Abca14
Slc25a1
Fbxo27
Armcx1
Ephb3
Usp48
Fntb
Pdzd9
Surf6
Hlf
Scnn1g
Pik3r4
Zfp638
Basp1
Trp53bp1
Pou2f2
Snai1
Arf3
Sec23ip
Mrps14
Kif18a
Npr1
Zfp623
Ccdc126
Enpp3
Col1a1
2410137M14Rik
Rae1
Stxbp4
Cox11
Pafah1b3
Scaf4
Ell2
Eif5a2
Naa38
Cyb5d1
Stk35
Spp1
B9d1
Zfp658
Rnf10
Ankfy1
Bod1l
Rab27a
Sfi1
Stk11ip
Slc36a1
Polr2e
Ube2d3
Btbd10
Bcl2l1
Huwe1
Snx18
Pafah2
Dpy30
Drosha
6030458C11Rik
Gm5544
Aadat
Trpm3
Stag3
Gpc2
Slc12a9
Elf3
Smarca5
Ephb1
Arl15
Rps19
Lix1
Ccdc194
Dnajb4
Fubp1
Kcnh1
Rab37
Pdzd2
Tmcc2
Cirbp
Wrap53
Trp53
Tmem95
Rspry1
Psme3ip1
Apmap
Mlf2
Crk
Selenom
Myo10
Rpl7a
Med22
Rif1
Nudt1
Pkd2
Adprhl1
Adnp
Dusp13
Piezo1
Eif4a3
Vegfa
Rbm4b
Tinf2
Nsun3
Mymx
Cdc5l
Csrp1
Mrps28
Gse1
Catip
Cilk1
Zyg11a
Acaa1a
Myd88
Cpeb3
Josd2
Ifrd2
Zbtb40
Ccin
Prrt3
Cdk5rap3
Gm14393
Ppdpf
Phc1
Dffa
Amt
Rnd3
Nat8f4
Adra2b
Atp5j2
Hspa4
Nudt13
Gstm1
Slc39a14
Ppp4r3b
Trappc2
Ofd1
Ddx20
Gadd45b
Psmb2
Calr3
1700030K09Rik
N4bp2l2
Edrf1
Arih2
Med23
Usp44
Mgat5b
Cnpy1
Phf12
Tsc22d1
Mcts2
Rps3a1
Cep112
Trim36
Mtnr1a
Mms22l
Ncoa4
Dusp23
Nme8
Grik4
H2bc22
H2ac22
Tcf7l1
Nanog
Khsrp
Vegfc
Phf23
Wdr27
1600012H06Rik
Wnk1
Ifitm1
Bdh2
Rfx1
Med1
Zfp819
Rbm14
Gm21992
Adgrb2
Racgap1
Creld2
Alg12
Rapgef1
Zcrb1
Pphln1
Fam161a
Irak2
Gm10634
Slc15a1
Cnnm2
Gm5155
Zfp148
Tsen54
Caskin2
Ist1
Tomm20
Efnb1
Ogt
Slc2a1
Upf3a
Rab38
Cep85
0610040J01Rik
Tmem143
Syngr4
Gm11100
Prickle1
Gm3696
Megf8
Anp32e
Arnt
Vta1
Mllt1
Tns1
Rufy4
Ntn5
Tubgcp5
Sik2
Srsf10
Zscan22
Rnpc3
Pibf1
Dis3
Micalcl
Puf60
Riok2
Sugp1
Mau2
Ergic2
Fam118a
Rabl3
Gtf2e1
Rfx4
Epb41l4a
Ddx58
Asph
Dnah8
Hmces
Gadd45g
Pelp1
Mrpl39
Fubp3
Bcat1
Cd164
Endov
Flvcr2
Poc5
Asmt
Slc2a4
Lpar1
Slc25a45
Pnpla6
Gba
Cdc42ep4
Ptgr2
Slc12a6
Tfap2c
Spns1
Cwc25
Ahctf1
Prmt8
Flrt3
Taf1c
Pcdhgc4
Oasl1
Adap1
Uqcrc1
Zfp960
Serinc5
Hsbp1
Spdl1
Mfsd8
Tmem242
Rbpj
Med11
Fitm2
Mc3r
Atg16l1
Rhpn2
Zcwpw2
Azi2
D1Pas1
Rnf125
Ttc41
Hsp90b1
Sap30bp
Recql5
Smim10l1
Ndufaf3
Fmr1nb
Pkia
Nyx
Scgb1c1
Stat6
Pccb
Mafb
Npm1
Banp
Arhgef17
Mpc1
Gm5165
Zfp286
Tbc1d9b
Smg5
Pipox
Vmn2r12
Meltf
Ninj2
H4f16
Akap11
Hesx1
Abhd18
Zfp566
Micu2
Rrp9
Parp3
Cdh23
Mob1b
Cep70
Sms
Yod1
Fem1b
Islr2
2410141K09Rik
Ripply1
Gpr1
Sh3rf3
Entpd6
Ntrk2
Dpep2
Lactbl1
Lsr
Fam187b
Serpina3i
Mllt6
Prcc
Gcc1
Tonsl
Snx10
Rpl7l1
Ddhd2
Haspin
Deptor
Cdc20b
Slc6a19
Clu
Cenpt
Col23a1
Adgrv1
Slc35b1
Dbr1
Rgs9
Samd9l
Tpm1
Sema5b
Gm3558
Tmem211
Top1mt
Inppl1
Traf5
Herc1
Mtss1
Ube2q1
Adam19
Clec12a
Ndufv1
D830030K20Rik
Plin3
Epc1
Radil
Golm2
Nupl1
Cox7a2l
Agbl3
Trpm5
Npepps
Spr
Ndufaf6
Zfp386
Slc38a9
Ino80
Cnot10
Lsm11
Fancg
Cped1
Scn3a
Tmem47
Cct8
Sh3glb1
Ttll1
Zmat5
Uqcr10
Tfap2a
Snx15
Gm38396
Mcf2
Wnt7a
Med16
Cdk20
Rerg
Pcmtd1
Phf5a
Aco2
Dnajc6
Tmem218
Zfp428
Polr1b
Nog
Sun1
4833439L19Rik
Polr3b
Upp1
Tlr2
Nkain4
Thada
Polr2b
Noa1
Insyn2b
Ttc14
Calhm5
Zfp180
Mmut
Cenpq
Rnf4
Pou5f1
Snapc5
Nceh1
Otos
Nsun6
Arl5b
Dctn2
Dgkh
Ube2j2
Srrt
Lrrtm3
Lrrc71
Adra2a
Rpl26
Rpl12
Lrsam1
Gins4
Tmem220
Terf1
Slc25a11
Rnf167
Ncapg
Galp
Zfp574
Dock5
Psma1
Lrif1
2010003K11Rik
Tedc1
Scn1a
Gabrp
Adamts17
Rnf150
Gm20594
Kazald1
Gpatch3
Steap1
Pdxdc1
Mpv17l
Kdm3a
Snrpc
Naa50
Atp6v1a
Arhgap28
BC004004
Klhdc9
Rnf43
Rbm17
Hscb
Chek2
Zfp97
Ess2
Mrm2
Npff
Mob1a
Abr
Spata20
Ciao3
Apbb2
Gtsf1l
Dhcr7
Idnk
Defb1
Pex10
Atp8b5
Gstm6
Parp11
Cemip
Wnt5b
Fgf18
BC107364
1700008O03Rik
Pafah1b2
Otx2
Sik3
Add1
Pds5b
Mycl
Gata3
Plekhb1
Alg8
Gm2237
Dnajc12
Nfkbiz
Dmtn
Rrs1
Alkbh7
Cryba4
Hoxa5
Arfip1
Tmem154
Mbtps1
Ltbp1
Brwd1
Tle3
Srek1
Ptpru
Itgb6
Tmem18
Etv1
Ccnd3
Ddx47
Slfn10-ps
Rad51d
Filip1
Fam220a
Nudt17
Trim71
Plekhg2
Ago2
Atp2c1
Tmem209
Ssmem1
Tbrg1
Stmn1
Cast
Psmd8
Vps35l
Rtca
Zzz3
Homer3
Ankrd13c
Mycn
Bmp4
Dhrs7b
Fam76a
Chaf1a
Ltbp2
Rbm26
Tcf3
Zfp871
Gm3752
Wdr18
Gjb3
Zfp345
Sypl2
Tmprss9
Lman2
Tmem191c
Gm33933
Slc6a8
Zfp408
Sdha
Ccdc127
Rpl10a
Ocm
Slc35b4
Pde7b
Drg1
Synm
Gm3739
Rcbtb1
Glipr1l3
Lgi4
Apob
Gm51425
H2bc4
H2ac6
Alad
Nol11
Nid2
Amz2
Qtrt2
Ccdc191
Rprm
Ror2
Stk38l
Tspyl1
Gm1070
Tmem101
Fcor
Gpx1
Gmppa
Psmd3
Ccdc83
Sema6c
Bms1
Apol7a
Naa35
Dguok
Prepl
Camkmt
Rpl23a
Nr6a1
Ryr2
Sulf1
Polr3e
Trappc3l
Egr2
Mphosph8
Msi1
Pop7
Rbm25
Gabpb2
Kif2c
Praf2
Fbxo15
Dppa5a
Lpar6
Plekho2
Dars
Gm3173
Gramd3
Polr3f
Dzank1
Cluap1
1700037C18Rik
Tgfb1i1
Cox6b1
Sp2
4833420G17Rik
Ube2d2a
Tomm40l
Cgnl1
Ccdc63
L3mbtl2
Gm6712
Snrpg
Timm21
Pde1b
Phlpp1
Thbs2
Adgrg5
Klhl18
Kif9
Psph
Cct6a
Crybg1
Hcrtr1
Plk2
Gcat
Itga9
Pglyrp1
Sp1
Crebzf
Tgfb3
Thap1
L1td1
Dcbld1
Cbx5
Zfp493
Vstm2l
Mad1l1
C2cd4b
Bcl3
Ly6k
Pcdhgb8
Hvcn1
Donson
Rpusd1
Chtf18
Kctd7
Cdipt
Cdiptos
Fbxo11
Gnpnat1
Prss48
Zfp622
Pigo
Gid8
Dido1
Ccdc62
Abca1
Sbno1
Asb16
Cd276
Zfp689
Pemt
Nectin2
Zfp947
Pde2a
Hsd17b6
Lyzl6
Pbld2
Hnrnph3
Cerkl
Agfg1
Il33
Atg101
Def6
Relch
Pign
Vmac
Ndufa11
Chd9
Pym1
Kmt5c
Strip1
Tent5b
Trim34a
Cryzl2
Rps23rg1
Pts
Coq8a
Nanp
Mertk
Daam1
Kifc3
Wif1
Cep170
Sdccag8
Vkorc1
Abl1
Cfap70
1700125H20Rik
Dcp1a
Cntnap2
Afap1l2
Gm3488
Abcb8
Fam189a1
Abcg2
Krcc1
Ovca2
Saa3
Coq10a
Cpsf6
Prickle2
Ywhag
Rpp38
Gm45871
Ccdc142
Frzb
Etfrf1
Casc1
Gm10406
Ldb1
Gucy1a2
A630001G21Rik
Nktr
Med12
Upf3b
Poglut3
Tex9
Eif3f
Wsb2
Fmnl3
Dync1i2
Barx2
Gsta4
Kcnmb2
Vps4b
Pgap3
Il18
Bco2
Ints9
Hmbox1
Pax2
Mettl3
C130074G19Rik
Troap
Ppil2
Cdx1
Mcmdc2
Tha1
Ndufa12
Cpsf4l
Plekhf2
Cenpu
Zfp54
Smc1b
Comtd1
Itgb3bp
Efcab7
Wdr38
Churc1
Rsad1
Tph2
Cfap100
Atp5mpl
Hip1
Slc5a6
Atraid
Mad2l1bp
Bambi
Srp19
Acp2
Timm13
C1rl
Rpp40
Dnajc21
Nfe2l1
Lrfn2
Zkscan2
Ska2
Prr11
Atf7
Zfp13
Scamp3
Stap2
Mpnd
Tfe3
Nlrc4
Idh1
Virma
Hck
Slc15a4
Oas1g
Dennd2c
Sbk2
Gchfr
Tnfrsf19
Parl
Liph
Dner
Tomm7
Tafa5
Zfp369
Icam4
Zfp738
Gpx8
Tex19.1
Kdm4d
Cwc15
Spock1
Ptpn4
Thap7
Dpp6
Pik3r2
Xrcc5
Tnfaip1
Ift20
Mobp
Ptrhd1
Cenpo
Rpl22
Copb2
Necab2
Fbxw10
Cidea
Upk2
Vps28
Atp6v0d1
Mad2l2
Taf5
Rad51
Tsnaxip1
Ranbp10
Dlgap4
Cblc
Kcnj6
Trim66
Ppm1f
Zfp595
Mad2l1
H4c18
Stat3
Cd2bp2
Rlim
A830018L16Rik
Kif26a
Olfr15
Get4
Map3k7
Ints12
Gstcd
Txnl4b
Dhx38
Smim19
Slc20a2
Pdk1
Atp5g1
Mmachc
Ccdc163
Slc39a13
Msh6
Cep135
Shpk
Ctns
Oas1a
Btbd16
Cstf3
Prdx1
Slc33a1
Mtus1
Serpinb9
Spc25
Men1
Prex1
Thoc6
Hcfc1r1
Slc12a2
Sh2d5
Smc3
Cep164
Depdc1b
Utp3
Stil
Knl1
Nvl
Pacsin2
Slc43a1
Ddx24
Shisa2
Rbm46
Chmp2a
Ssbp1
Ufl1
Zfp955a
Spata33
Chmp1a
Spg11
Ints4
Stk40
Wipf1
Tmem29
Zwilch
Rpl4
Frg1
Megf10
Mcidas
Erap1
Tigd2
Nufip2