ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9450557 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◢ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◣ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

Denr
Qrich1
Styxl1
Mdh2
Wdr77
Atp5pb
Cdk12
Kmt2a
Scamp5
Rbm39
Eif4a3
Banp
Akap11
Mapk14
Ireb2
Hspa4
Mcts2
Dnajb4
Fubp1
Psmd5
Ube2d3
Rraga
Ercc6l2
Arf3
Naa35
Zzz3
Supt5
Micos10
Golm2
Nsun3
Ankfy1
Mms22l
Edrf1
Zbtb2
Herc1
Rps19
Stxbp4
Cox11
Puf60
Tigd2
Marchf7
Btbd10
Zkscan2
Lpxn
Zfp91
Lsm14a
Ddhd2
Eif5a2
Ssbp4
Mrpl28
Zcchc14
Spsb3
Nubp2
Smarca5
Creld2
Alg12
Slc25a11
Rnf167
Dgke
Uhrf2
Tspan17
Rabl3
Gtf2e1
Smim10l1
Myef2
Nudt1
Rpl7a
Med22
Nptn
Coq9
Ciapin1
Fam76a
Spdl1
Get4
Ttc14
Ppp4r3b
Srek1
Nktr
Mob1a
Map3k7
Pou2f1
Yod1
Adnp
Aip
Tmem134
Zfp623
Rnf4
Kazald1
Tubgcp5
Tmco1
Ell2
Srsf10
D1Pas1
Atf7
Trappc2
Ofd1
Calr3
1700030K09Rik
Mfsd8
Polr3k
Lamp1
Rab6a
Tmem47
Naa38
Cyb5d1
Icmt
Zmym3
Fam135a
Eif5
Rnpc3
Efs
Dhrs3
Cul5
Drg1
Vdac3
Wdr27
1600012H06Rik
Trim24
Upf3a
Rps7
Rab33b
Rps3a1
Thap7
Rbm26
Cstf3
Prdx1
Glcci1
Tpr
Odr4
Mbd6
Npepps
Stk11ip
Tcf25
Rspry1
Psme3ip1
Eif1ad
Banf1
Ube2e3
Polr2e
Gtf2ird1
Atf2
Stag3
Gpc2
Pcmtd1
Surf6
Abhd18
Cdc5l
Crebzf
Rims3
Zfp566
Nfkbiz
Mphosph8
Adgrv1
Epb41l5
Huwe1
Tmem209
Ssmem1
Wdr6
Ggnbp2
Tlk2
Sf3a2
Plekhj1
Usp53
Slc25a4
Nupl1
Yif1b
Arfip1
Kctd19
Lrrc36
Tcf3
Tprgl
Stk38l
Sfi1
Rps28
Ndufa7
Mettl8
Dcaf17
Clba1
Dynll1
Kin
Atp5c1
Hells
Asph
Zdhhc5
Zbtb40
Micu2
Ncoa4
Haspin
Pradc1
Cct7
Tspyl1
Mrps14
Smim27
Zfp960
Chuk
Arl2bp
Ptpn4
Dzip3
Cip2a
Slc1a5
Relch
Pign
Abcf2
Lmln
Khsrp
Septin7
4833439L19Rik
Rpl10a
Hip1
Dazap1
Caprin2
Lsm8
Asxl1
Ksr2
Shroom3
Atp5mpl
Rictor
Rpl26
Supt16
Pibf1
Dis3
Mbtps1
Homer3
Luc7l2
Acaa1a
Myd88
Larp4b
Ssbp1
Cpsf6
Npc1
Npm1
Chmp2a
Map1b
Mrps28
Nop14
Grk4
Siva1
Uspl1
Mymx
Smarcd2
Srsf11
Lrrc40
Fzd6
Sap18b
Sap18
Zmym4
Etfa
Drosha
6030458C11Rik
Mob1b
Gtf2a1
Tysnd1
Psmb2
Polr2b
Noa1
Rfesd
Rbks
Babam2
Utp3
Capn1
Rpl12
Lrsam1
Virma
Dbr1
Nsd3
Snx5
Mgme1
Cox6b2
Dars
Cnot3
Ptrhd1
Cenpo
Dhx32
Rmnd5b
4930447C04Rik
Idh1
Pikfyve
Donson
Ska3
Mrpl57
Tnip2
Glce
Zfand3
Med16
Cep85
Slc5a6
Atraid
Kif2a
Exo5
Papolb
Trp53bp2
Dlc1
Zfp574
Xxylt1
Dennd2a
Ankhd1
Zfp53
Mrtfb
Prss48
Atad1
Foxp2
Gdi2
Pcnt
Zscan22
Ryr2
Ptgr2
Tomm20
Snrpd3
Gucd1
Mrpl40
Hira
Cul3
Pih1d1
Aldh16a1
Rc3h2
Fam219a
Dnaic1
Ska2
Prr11
Dctn2
Zfp78
Ppm1g
Seh1l
Dnajc27
Tas1r1
Nol9
Sec23ip
Exosc10
Grb2
Sap30bp
Recql5
Cs
Sspn
Smdt1
Ncapg2
Yy1
Hscb
Chek2
Cep170b
Trrap
Pbld2
Hnrnph3
Zfp219
Ehd1
Csnk1g3
Etfrf1
Casc1
Brf1
Tmx3
Zfp180
Uqcrq
Tmem183a
Tpmt
Kdm1b
Ubr3
Trim59
Krr1
Dut
Ptges3
Zfp622
Sec63
Flcn
Ppard
Ifrd2
Mllt6
Mettl16
Pop7
Lrba
Ikzf5
Acadsb
Clasp1
Ttc41
Hsp90b1
Ctnnb1
Cwc25
Nsun4
Wdfy3
Gps2
Zfp286
Slc15a4
Nanp
Rpp38
Gm51425
Tmem18
Ddx20
Ndufaf3
Zfp523
Ankrd40
Agl
B230219D22Rik
Phc2
Ikbip
Apaf1
Stil
Mcfd2
Cep350
Kdm2b
Mpv17l2
Copb2
Spata33
Chmp1a
Smim7
Mtmr9
Zfp386
Tab3
Matr3
Gpr157
Riok2
Taok1
Smc1b
Fadd
Actn2
Gm5165
Rpl9
Lias
Ccnb1
Mapk8
Gm3448
Gm3417
Tcte3
Gm3435
Sec62
Mysm1
Trim35
Cd9
Fnbp4
Gm3667
Ap2a2
Gjc1
Rfx1
Klhl18
Kif9
Trim11
Zdhhc17
Rapgef6
Sp1
Fbxo27
Rab43
Rpl35
9030025P20Rik
Otub2
Rps6
Lonp2
Rab5c
Wdr73
Ahctf1
Cct8
Frzb
Bclaf1
Scaper
Slc39a9
Erh
Phf23
Smg5
Mars1
Dcp1a
Thada
Me2
Snx12
Rnf11
Mindy4
Gpr19
Adss
Ost4
Sde2
Vps28
Kctd7
Dusp6
Zyg11b
Tbc1d32
Xrra1
Spcs2
Hyou1
Nudt2
Kif24
Lman2
Clcn2
Sipa1l1
Yipf3
Polr1c
Tmem41b
Nbeal1
Cdkn2a
Mettl3
Ramac
Zfp609
BC107364
Zfp57
Osbpl2
Wfs1
Vezf1
Fmr1nb
Lrif1
Gm3173
Cd2ap
Pcca
Snx18
Slx4ip
Mkks
Srp19
Ncoa2
Khk
Actr1a
Eef1a1
Zfp512b
Dguok
Vcl
Gas1
Rrnad1
Isg20l2
Spint2
Nrbf2
Ube2cbp
Rab7
Tmem129
Tacc3
Plekhb1
Fem1b
Arl15
H4f16
Rnf212b
Qk
Rad23a
Mib2
Porcn
Ccdc186
Chaf1a
Zfp428
Ints6
Hck
BC004004
Ncl
Gid8
Dido1
Mphosph6
Cox7a2l
Ppm1d
Hsbp1
Tmem116
Erp29
Rmi1
Hnrnpk
Sugp1
Mau2
Nt5dc3
Znrd1as
Znrd1
Erich1
Prdm10
Heatr1
Poc5
Gm2237
Stn1
Rpusd1
Chtf18
Vps4b
Fbrsl1
Wnk1
Usp37
Cnot9
Arid3a
Ybx1
Abi1
Thrb
Qsox2
Ints12
Gstcd
Zfp184
Trim37
Pnpla6
Ostc
Abhd11
Pdcl3
Zfyve28
Cfap99
Add1
Pemt
Ppp1r9a
Tep1
Ints13
Fgfr1op2
Ncapg
Ssr4
Idh3g
Med23
Mtf2
Stk38
Psph
Cct6a
Sft2d1
Mis18bp1
Nek2
Cenpu
Tecr
Gga1
Tab1
Srcap
Lta4h
Dck
Hspa12a
Eno4
Msi1
Imp4
Ccdc115
Ttc32
Bambi
Nprl3
Aftph
H4c1
H3c1
Luzp1
Csde1
Mmaa
Ercc5
Os9
Zfyve19
Dnajc17
Akap13
Cdk7
Xlr5b
DXBay18
Ino80
L3mbtl2
Mmut
Cenpq
Snrnp70
Rbpj
Mepce
Zcwpw1
Tomm7
Psma1
Fam161a
Crot
Pigo
Suv39h1
Rpl13a
Rnf8
Anp32e
Naaa
Tmem191c
Isl1
Ccdc62
Ralbp1
Crtc1
Lcmt2
Adal
Utp6
Gas8
Trpm7
Sowahc
Septin10
Mad2l1
Tcea1
Plod2
Cnot1
Rnf149
Dffa
Tcp11
Eml5
Lrrn2
Tssc4
Slc39a7
Rxrb
Tmem218
Arhgap28
Gpbp1
Map3k12
Rnh1
Mterf1a
Kbtbd8
Insr
Pnn
Nsmce3
Rtn4
Zc3h4
Nudt13
Tmem143
Syngr4
Ccz1
Nup205
Recql4
Lrrc14
Thoc1
Chmp5
Bag1
Tbc1d14
Smndc1
Ermard
Cdk1
Mpp5
Zfp605
Ccdc63
Thap11
Ranbp3
Srsf4
Mafg
Gltp
1700113H08Rik
Prcp
Ddias
Zfp398
Xpc
Lsm3
Polr3b
Mxd4
Usp13
Mak16
Leprot
N4bp2l2
Med6
Spag16
Pds5a
Ccnj
Jdp2
Cenpb
Slc25a36
Cabin1
Hdac6
Pdlim1
Enkd1
4933405L10Rik
Eif5a
Pdlim5
Nmd3
Nsd1
Emc7
Ppp2ca
Nifk
Ppp1r2
Timm17a
Vamp3
Eml4
Maz
Zkscan5
Mppe1
Hmgb2
Rhbg
Crlf3
Vcp
Trib3
Erf
Jade1
Slc35e1
Serbp1
2610528J11Rik
Pifo
Nup50
Asf1b
Stk35
Coq8a
Zswim7
Ttc19
Vps50
Lyrm7
Cactin
Arhgap11a
Cdc20
Cbll1
Nabp1
Thap2
Cdk11b
Smad2
Zfc3h1
Mccc2
Wwc2
Arhgap12
Rps11
Ctbp2
Pnpla3
Josd2
Strip1
Tbc1d23
Mre11a
Ankrd49
Rundc3b
Dnal4
Aggf1
Slc38a9
Haus4
Dcaf6
Mpc2
Cct5
Atpsckmt
Spsb4
Msrb2
Dhrs7b
Prpf4
Cdc26
Polr2h
Vmp1
Ptrh2
Kcnb1
Col13a1
Miga1
U2af1
Zfp346
Cenpt
Pip4k2a
Trp53bp1
Agbl3
Sergef
Fbxo15
Gsc2
Por
Bet1
Jpt2
Zfp972
Kmt5b
Hlf
Phf10
Emc8
Gm27021
Cox4i1
Mtarc2
Nol6
Nup93
Srsf3
Cox16
Lsm4
1110008P14Rik
Erlin1
H2bc4
H2ac6
Thyn1
Acad8
Ddrgk1
Lims1
Mme
Sprtn
Exoc8
Fkbp3
Ism2
Rbm14
Gm21992
Prcc
Elovl5
Abcc5
Zfp13
Ndufa12
Senp2
Umad1
Rpa3
Abl1
Mterf1b
Cfap298
Pou4f1
Cdkn2aipnl
Zfp978
Camsap1
Ergic2
Rpe
Vmn2r12
H3c15
H3c14
Cep70
Msh3
Dhfr
H2ac19
H2ac18
Cdipt
Cdiptos
Pym1
Cpd
Eif4a1
Snrpg
Med13
E030030I06Rik
Spg11
Prepl
Camkmt
Farsa
Clptm1
Ppia
Pdia4
Tma7
Ccdc51
Stimate
Usp47
Mob3a
Izumo4
Pafah1b3
Nat10
Rmdn3
Pmf1
Rnf103
Smarcad1
Cbx1
Sigmar1
Stx4a
Slc35b1
Dedd
Snx11
Msrb1
Vmac
Ndufa11
Zfp41
Ddhd1
Uri1
Nrf1
Sumf1
Kctd15
Coq10b
Got1
Prrt3
Rnf166
Ctu2
Vav3
Gpatch3
Zfp120
Cep72
Rfc1
Degs1
Srsf5
Nkrf
Abhd17c
Hspbp1
Tyk2
Akap1
1110004F10Rik
Lrr1
Psen1
Nadk2
Slc35e3
Zc3h13
Btg1
Laptm4a
Eefsec
Mgat4a
Sarnp
Ormdl2
Tcf12
Rtkn2
Rps21
Negr1
Lhpp
Mdm2
2610042L04Rik
Otud4
Sdr39u1
Megf8
Gm3739
Rbbp6
Rab4b
Nup62
Il4i1b
Atf5
Prune1
Polr2f
1700088E04Rik
Hdac1
Adk
Mrps7
Gga3
Mindy1
Ap3m1
Rfc5
Snrpc
Men1
Wwox
Pkm
Magi1
Scg3
Prmt3
Atg16l2
Canx
Zc3h6
Nkx3-1
Srebf1
Srsf1
Spr
Tbp
Taf6l
Ccdc12
Ptpmt1
Eif4e1b
Pigc
4930558K02Rik
Tmem11
Prodh
Tsc22d1
Ppp2r3a
Gclm
Prxl2b
Tdp2
Acot13
Zfp207
Ablim1
Fbxw11
Mxd1
Trappc1
Cntrob
Itfg2
Kmt2d
Ccnyl1
Nup133
Pgp
Mad2l1bp
Rad23b
Mycbp
Zfp784