ChIP-Atlas: Target genes

Potential target genes for Otx2

Query protein: Otx2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX499130 | EpiLC
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Otx2's Target genes

◢ Otx2: Average

◢ SRX1054881: Embryonic brains

◢ SRX1054884: Embryonic brains

◢ SRX1054887: Embryonic brains

◢ SRX499129: EpiLC

◣ SRX499130: EpiLC

◢ SRX1410920: EpiSC

◢ SRX1410925: EpiSC

◢ SRX499117: ES cells

◢ SRX499141: ES cells

◢ SRX499143: ES cells

◢ SRX9450551: ES cells

◢ SRX9450552: ES cells

◢ SRX9450557: ES cells

◢ SRX9450558: ES cells

◢ SRX21482114: Ganglion cells

◢ SRX429081: Retina

◢ SRX429085: Retina

◢ Otx2: STRING

2610528J11Rik
Mrpl28
Surf6
Gdf5
Dhx32
Zfp658
Phc2
Tstd1
Lima1
Tmem154
Inppl1
Slc45a3
Calr3
1700030K09Rik
Zfp623
Itgb8
Zcrb1
Pphln1
Il18
Bco2
Eif1ad
Banf1
Sap30bp
Recql5
Clec12a
Frzb
Rspry1
Psme3ip1
Ifrd2
Thap4
Mib2
Abcf2
Slc39a14
Stk11ip
Armcx1
Zscan22
G2e3
Gpr1
Gtf2ird1
Mtf2
Stk38
Arhgap32
Polr3k
Prrt3
Alg8
Nudt13
Pcyt1b
Tepp
Abca4
Bod1l
Alpl
N4bp2l2
Mphosph8
Ing2
Numa1
Zfp960
Npepps
Plin3
Khsrp
Eif5a2
Myo10
Msi1
Irf2bpl
Kif18a
Lrpap1
Anp32e
Ifitm1
Gba
Rbm14
Gm21992
Sall2
Ercc6l2
Zfp428
Srek1
Irgm1
Scaf4
Hscb
Chek2
Rbbp8nl
Snurf
Snrpn
Drosha
6030458C11Rik
Tigd2
Cdk12
Thada
Hvcn1
Sfi1
Ireb2
Phc1
Homer3
Kcnmb2
BC107364
Rab15
Trp53bp1
Ccdc194
Ccdc110
Porcn
Plekhg1
Lrrtm3
Zfp9
Prss48
Il1rapl1
Rabl3
Gtf2e1
Phyhd1
Fgd4
Nfkbiz
Adgrv1
Nanog
Styxl1
Mdh2
Tprgl
Zfp317
Arfip1
Slc40a1
Dhx8
Tmem218
Prdm10
Pafah1b3
Prickle2
Rps23rg1
Phf23
Emc8
Gm27021
Cox4i1
Pde4b
Cbl
Zfp180
Reep3
Mterf1b
Mrps14
Arnt
Zfp791
Efs
Epb41l5
Lrrn2
Rbm39
Zfp946
Rif1
Gm5165
Virma
Gjc1
Prickle1
Cpsf6
Pcsk9
Ptgr2
Mafb
Dpp6
Tjp2
Slc7a3
Wnt5b
Polr2e
H4f16
Atp5mpl
Poc5
Cdh10
Lypd2
Acaa1a
Myd88
Riok2
Cstf3
Stil
Spr
Ell2
Tmem270
Mterf1a
Wdr77
Atp5pb
Ramp2
Kdm2b
Chmp2a
Cwc25
Mrps28
Mettl8
Dcaf17
Ankrd39
Trim2
Parp10
Pou5f1
Med16
Zfp386
Epcam
Xxylt1
Gchfr
Supt5
Pipox
Chchd3
Snx18
Coq8a
Dmkn
P2rx7
Ttc41
Hsp90b1
Cox7a2l
Dhrs7b
Oas1g
Rdx
Slc38a9
Mcf2
Tma7
Ccdc51
Nifk
Sspo
Nupl1
Btbd17
Rrp36
Zfp13
Rab38
Sft2d1
Fbxo15
Nop14
Grk4
Dazap1
Dennd2a
Cdh9
Snrpc
Lmln
Zmym4
Pdzk1
Bspry
Prex1
Ssbp1
Dguok
Kmt5c
Trim33
Bcar3
Tomm20
Gm3604
Ankrd6
Ndufs8
L3mbtl2
Serinc5
Qrich1
Dusp6
Cerkl
B4galt1
Ctcf
Mindy4
Poglut3
Slc35b1
Ndufa12
Ly6e
Pigo
Rnf10
Ldc1
Pym1
Cep170b
Mlf2
Tspan9
Tmem220
Megf8
Ccp110
Pou2f1
Tnrc6b
Hlf
Rps3a1
Gbp9
Flt4
Kazald1
Tomm7
Amn1
Phf12
Zfyve19
Dnajc17
Tyr
Zkscan5
Tmeff1
Zfp574
Pex5l
Pemt
Med12
Adnp
Galnt16
Fsbp
Imp4
Ccdc115
Rc3h2
Zfp605
Arhgap42
Gbp6
Faap20
Abca14
Slc46a3
Gid8
Dido1
Chd9
Scamp5
Micos10
Med6
Zyg11b
Atcay
Rad54l
Tubd1
Rps6kb1
A2m
Lrrc38
Mob1b
Pes1
Ptrhd1
Cenpo
Tril
Mmut
Cenpq
Pop7
Septin4
Emc7
Tmem47
Wdr27
1600012H06Rik
Krr1
Slc25a1
Afap1l2
H2bc4
H2ac6
Insr
Ndufaf3
Gm14393
Trp73
Zfp532
Med23
Pifo
Dusp13
Smim43
Vps18
Rnh1
Trim35
Dennd2c
Psmd5
Jmjd1c
Creld2
Alg12
Ankrd40
Mad2l1bp
Sulf1
Csrnp3
Eif4e1b
Itfg2
Hip1
Etfrf1
Casc1
Rraga
Pnpla6
Psph
Cct6a
Rdh12
Vps28
Rpusd1
Chtf18
Gm51425
2410137M14Rik
Prcc
Mettl16
Spp1
Qtrt2
Ccdc191
Mapk14
Ints12
Gstcd
Vrtn
Mars1
Asf1b
Zfp566
Ppp4r3b
Scamp3
Cyp7b1
Ankib1
Naa16
Npc1
Bdh2
Mcts2
Psmb8
Ripply1
Psma1
Os9
Fxn
Tlk2
Trim11
Pafah2
Fbxo27
Catip
Denr
Rbpj
Naa50
Atp6v1a
Col13a1
Stk35
Plcd4
Cep85
Dffa
Polr3b
Nt5c3
Vkorc1
Abcg1
Naa35
Actn2
Pcnx3
Map3k11
Ric3
Snap23
Utp3
Galk2
Cops2
Cysltr1
Slc27a2
Tmem143
Syngr4
Anxa11
Pcdhgc4
Tcf7
Naa80
Hyal3
Nufip2
4930447C04Rik
Thyn1
Acad8
Dedd
Foxp1
Ube2d3
Prdm4
Synm
Hells
Clec2d
Cdh1
Mad1l1
Actr1a
Ralgps2
Ubr7
Map1b
Ufl1
Igsf9
Shc4
Pcdhga12
Scn1a
Gm3696
Srrt
Dcp1a
Zfp128
Mymx
Stk39
Kbtbd8
Psmd11
Mettl3
Arhgap28
Zfp871
Ahctf1
Ppp1r15b
Zscan10
Cnot10
Zfp819
Pbx1
Dhx16
Tnfrsf8
Zfp750
Rab43
Rbm25
Stag3
Gpc2
Rbm6
Psmb2
Pnn
Efemp1
Yif1a
Arl15
Naaa
Nkx3-1
Cs
Rbm42
Vps33b
Ostc
Rpia
Flnb
Gm3558
Tmem201
Cox16
Stoml2
Lpar2
Plekhb1
Bmpr1b
Krtdap
Lefty1
Caprin2
Add1
Msantd2
Haspin
Ppp1r9a
Slc25a44
Cd164
Scnn1g
Tuba1a
Timm22
Slc39a2
Mrps23
Zbtb6
Gm8439
Rab3ip
Tmem11
Ntn5
Gm38396
Tef
Hjurp
A730008H23Rik
Tspan17
Atg16l1
Znrd1as
Znrd1
Abhd18
Clcn2
Zfp972
Cd38
Fam178b
Zyg11a
Defb1
Lman2
Fam118a
Abcg2
Ska2
Prr11
Scrn2
Rpl7a
Med22
Zfp97
6720489N17Rik
Rgs12
Sil1
Glipr1l3
Cdipt
Cdiptos
Upp1
Igbp1
Nudt1
Tubgcp5
Mecp2
Polr1b
Ptprs
Ahcyl1
Plekhf2
Hnrnph1
Eif3c
Cep72
Snx15
Pex3
Adat2
Tmem255b
Fbxo11
Cdk1
AB010352
Naa38
Cyb5d1
Zfp493
Sf3b2
Cnpy1
Trappc3
Ryr2
Cntnap2
Sema3a
Soat1
Slc9a3
Triqk
Josd2
0610040J01Rik
Stxbp4
Cox11
Knl1
Ephb3
Zfp638
Cdc5l
C77080
Srsf11
Lrrc40
Mad2l1
Clu
Fah
Fdps
Prdm14
Lrp2bp
Dusp5
Adprhl2
Plxnb1
Smarca5
Nek2
Fam169a
Tpm1
Mzf1
Rpl9
Lias
Zfp955b
Msl3l2
Asmt
Ankfy1
D1Pas1
Sp1
Cdc14b
Cdhr1
Mid1
Prcp
Ddias
Ubr5
Eif4a1
Magi1
Cdk20
Slc35e4
Prpf8
Evl
Ooep
Rbm4b
Ctbp2
Fundc1
Rapgef1
Ddit4
Phf5a
Aco2
Slc30a6
Dmtn
Slc33a1
Ddah2
Ndufb6
Rin2
Sec23ip
Hnrnph2
Gla
Nip7
Cog8
Tecr
Icam4
Pigm
Cyp2j9
Aadat
Pigc
4930558K02Rik
Itga5
Fbxo36
Trip12
Kctd7
Kctd5
Nvl
Sarnp
Ormdl2
Arhgef17
Ccar2
Smim19
Slc20a2
Lrtm1
Trpm3
Mustn1
Lrrn4
Kmt2c
Sat2
Faf1
Rab18
Slc22a3
Shroom3
Men1
Ckmt1
Rmnd5b
Smg5
Pip4p2
Ccz1
H4c1
H3c1
Chaf1a
Slc39a4
Uspl1
Csrp1
Ddx56
Sh2d5
Dynll1
Zfp609
Car14
Fntb
Snrpe
Rln1
Rps19
Klhl18
Kif9
Alad
Trmt112
Prdx5
Ube2t
Zfand4
Rnf5
Slc35e3
Ints4
Sdhaf4
H4c18
Dpy30
Zfp689
Cdan1
Timm10
Bet1
Ess2
Sh3glb1
Rpl22
Glmp
Wrap53
Trp53
Gm36298
Fetub
Hsbp1
Bcl9
Nufip1
Gpalpp1
Plcxd1
Uqcrq
Nbeal1
Mtr
Slfn9
Lhpp
Wnt7b
Btla
Crebzf
Pcca
Dctn1
Adra2b
Grcc10
Zfp369
Fitm2
Stx3
Trip4
2010003K11Rik
Ddrgk1
Csnk1g1
Sco2
Tube1
Fam229b
Katna1
Nsa2
Gfm2
Chrm4
Thbs2
Ccar1
Mfsd14b
Rnf125
Ube3c
Rps2
Ints6
Ubl5
Fbxl12
Ubtf
Nyx
Pprc1
Ifitm2
Acyp1
Gps2
Madd
4833420G17Rik
Rpl23a
Wdpcp
Mdh1
Gm7932
Tor4a
Ints10
B9d1
Thra
Gpx1
Tysnd1
Ppp1r10
Gm6712
Egfl7
Fam172a
Glipr1l1
Btbd10
Zfp738
Ngdn
Ptk7
Tmem95
Tlr2
Tmprss13
Camsap1
Puf60
Eef1a1
Gpr89
Tspan31
Zfp935
Snrnp200
1810024B03Rik
Kcns1
Cobll1
Aven
Atg16l2
Rubcnl
Smim7
4833439L19Rik
Ank3
Gm5544
Eif4a3
Mcfd2
Gpr21
Donson
Tmcc3
Gpx8
Rsph4a
Tmem245
Zfp286
Lrig2
Fgfbp1
Rgs20
1700019D03Rik
Smg8
Vps50
Tmem101
Rnpc3
Zzef1
Cyb5d2
Arhgap26
Trmt10b
Tial1
Kif2c
Hexim2
Chuk
Acin1
1700123O20Rik
Timm13
Hdac9
Fam83e
Igfbp2
Gprc5c
Acp6
Spns1
Rhbdf1
Slc1a5
Gm3173
Rrnad1
Isg20l2
Nsmce3
Ppp1r16b
Isl1
Tmem135
Fzd4
Msrb1
Rangap1
Ndufa3
Cplx3
Ubp1
Oscar
Efcab12
Pura
2310030G06Rik
Dcaf11
Farsa
Ago2
Qser1
Dnajb4
Fubp1
Ccdc126
Trappc2
Ofd1
Cfap298
Tmed10
Rbm17
Zfp882
Get4
Ints9
Hmbox1
2410141K09Rik
Ptprz1
Enkd1
4933405L10Rik
Sptbn1
Ascc1
Anapc16
Prkacb
H2ax
Ap1g2
Fnbp4
Gripap1
Gng2
Zfp54
Leprot
Tbc1d32
Nsd1
Gpank1
Csnk2b
Mapk4
Samd11
Mrpl39
Btrc
Rab3c
Amt
Tuft1
Med11
Rps8
Adgrb2
Rac3
Mcts1
Rps6
Mepce
Zcwpw1
Ccdc60
Ncoa4
Csde1
Set
Ppip5k2
Gin1
Ttc14
Ppp2ca
Pdlim5
Spred1
Zp3
Tgm3
Otub2
Zfp446
Tfpt
Prpf31
Ppp1r3c
Coa3
Cntd1
Pax6
Nhsl1
Myadml2
Rhbg
Tmem43
Chchd4
Trim12c
Zcchc7
Ndrg3
Nfe2l2
Gpn3
Fam216a
Cox6b2
Eif5a
Ccndbp1
Rps27a
Clhc1
Cd2bp2
Sec61b
Alg2
Fam161a
Ergic2
Polr2h
Lamtor3
Ccpg1os
Ccpg1
Trappc9
Epc1
Mllt1
Mis18a
Ttc27
Iqgap1
Snrpd3
Gucd1
Uvssa
Tbrg1
Edrf1
Mfsd8
Cdk19
Gramd3
Tmsb15b2
Erich1
Cenpu
Taar9
Il33
Tbc1d15
Mb21d2
Arf3
Nsun3
Med24
Ttc33
Zfp346
Dcaf12
Spred2
Hacd3
Tex261
Zfp146
Meioc
Pou2f2
Cipc
Rpgrip1l
Fto
Npc2
Isca2
Lsm14b
Mrap2
Rnf141
Fam120a
Golph3l
Eml6
Lamp1
Rbm45
Mvb12a
Ddx24
Gm10130
Mtmr9
Txnl4b
Dhx38
Wdfy2
Ficd
Asph
Upf3b
Akirin2
Gemin4
Dbil5
Sdhaf3
Arl6ip1
Sgms1
Ccdc88c
Cxcl12
Arhgap12
Nqo1
Cdc20