ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416180 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◣ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Plxnc1
Pomc
Mafa
Ackr4
Zfp330
Srpx
Snrnp27
Mxd1
Map4k5
Atl1
Pgm2
Epb42
Crkl
Pdlim5
F11r
Ubl4b
Abca16
Mrpl36
Lrrc18
Prdm13
Slc5a12
Bend4
Tmem268
Atp6v1g1
Speer4a
Irx1
Hoxd4
Hoxd3
Scube2
Riox2
Olfr646
Wdr18
Vwf
St3gal2
Polr3gl
Lix1l
Ankrd34a
Gtf2h4
Lrguk
Lrp12
Cacna1c
Dcbld2
Hsdl2
Lsamp
Gm973
Ttr
Pkdcc
Nfia
Rarb
Gpc6
Alb
Slc31a2
Acsf2
Tbc1d22a
C1ql3
1700010B08Rik
Srsf6
Pou1f1
Rab19
Slc37a3
Otp
Atp8a1
Prickle1
Atic
T2
Dmrt3
Eps8
Met
Exoc1
Dbx2
Il20rb
Pitpnc1
Psmd12
Nrg1
Abcc4
Pdgfc
C6
Marchf3
Ddx1
Ffar4
Prickle2
Rtl1
Tcim
Ccno
Cntnap2
Calm1
Gpr84
Hoxc8
Adh5
Lipo4
Myom3
Gnat3
Csrp3
Dnah5
Grpel2
Ndnf
Ppm1e
Cpsf1
Olfr172
Mdm2
Fam174a
Atp5g2
Pla2r1
4933424G06Rik
Hipk3
Ccdc174
Nkx6-1
Prkar2b
Gfra3
Gm14092
Palld
Coq10a
Ankrd52
Aldh1a2
Phc2
Myh10
Sgms1
Cited4
Nxpe4
Zfp710
Zc2hc1c
Acyp1
Gpx2
Krtap19-2
Krtap19-1
Ifrd1
Arglu1
Nps
Arfgef1
Map4
Btg2
Rap1gds1
Gdf10
Ptger2
Dctd
Smad1
Ppp2r3a
Tox3
Efcab5
Efnb2
Sgcd
Hoxa4
Cemip2
Mapk8
Slc27a4
Dhx8
Ptn
Nlgn1
Slc25a39
Cited2
Hdx
Sesn1
Plpp6
4430402I18Rik
Rasal2
Tox
Pou3f3
Olfr298
Trim2
Foxn3
Tmco5
Dnajb13
Wdr47
Cxcl12
Mmrn1
Slc44a3
Nin
Angptl7
Krt222
Esrrg
Pitrm1
Pkhd1l1
Rbfox2
Ncoa5
Gucy1a1
Psd3
Pgbd5
G2e3
Trim59
Uap1
Dph5
Foxp1
Pik3c2g
Manbal
Dmrta1
Tmem126b
Tmem126a
Mpzl3
Gm5617
Copz1
Hnmt
Pou2f1
Pou3f2
Etfbkmt
Tjp2
Dtx4
Ubqln2
Atp1b4
2700062C07Rik
Lemd2
Ntn1
Spag17
Hagh
Fahd1
St8sia4
Ogfod1
Nudt21
2510009E07Rik
Morf4l1
Spag4
Wt1
Capn8
Prop1
Olfr1378
Tnpo1
Lpgat1
Vta1
Ccdc162
Cybc1
Narf
Pax8
Dcdc5
Zdhhc7
Drc7
Gtf2ird2
Niban1
Fgd3
Ptpn20
Ccn1
Cdca8
9930104L06Rik
Kif13b
Mbp
Ufsp1
Trip6
Srrt
Myo10
Olfr1024
Mettl8
Hoxd8
Cacna2d1
Synpo
Ezh2
Adtrp
Neurog2
Lrrn1
Olfr891
Trib2
Stk33
Fam234b
Hand1
Mllt3
Notch1
Emcn
Cradd
Tob1
Id1
Tcf12
Ece1
Dll1
Mfap3
Fam114a2
Mprip
Msrb2
Tnfsf8
Maml3
Hoxb6
Hoxb5
Gtf2a1
Pbx1
Hoxa2
Hoxa1
Nr0b1
Uncx
Sox21
Tecta
Nfib
Cdk17
Smim11
Kcne2
Epha5
Xaf1
Robo2
Snx1
Ciao2a
Slc6a5
Tle3
Ptger4
Cd47
Ociad2
Mapre1
Map6
Crybg3
Ccdc33
Thnsl1
Enkur
Hoxc6
Hoxc5
Grap2
Map1b
Ankrd6
Nr3c2
Schip1
Tox2
Mpv17l
Pdxdc1
Hibadh
Tnfrsf21
Ammecr1l
Rtn1
Treml4
Mecom
Hoxc4
Clstn2
Olfr1034
Cep128
Agmo
A530016L24Rik
Hoxa6
Hoxa5
Hoxa7
Hoxa3
Runx1t1
1700019A02Rik
Zfp42
Hoxb8
Hoxb7
Fgf13
Zfp503
Plch1
Zdhhc2
D6Ertd527e
Fmn1
Pum1
Jakmip2
Frg1
Paip1
Ksr1
Mab21l2
Ppp2r2d
Mapk1ip1
Agk
Sox6
Cox7a2l
Tmigd1
Plcb4
Fbxw7
Trio
Dad1
Abhd4
Evx2
Rgs3
Psmd7
Neurod4
Tceal7
Pik3r4
Nap1l1
Med13l
Lpar6
St8sia2
Wnt5a
Olfr572
Olfr571
Utp11
Grik4
Olfr1441
Plcz1
Capza3
Mrps33
Higd1c
2610528A11Rik
P4ha3
A930009A15Rik
Tal2
Pknox2
Galr3
Olfr898
Ivd
Arl13b
Iglon5
Slit3
Lce1h
Lce1g
Tle1
Hoxb4
Hoxb3
Cyp1b1
Clasp2
B3galt1
Srbd1
Nap1l4
Nrp1
Slc22a1
Clvs2
Xpr1
Olfm2
Ddx6
Bahcc1
D430041D05Rik
Cxxc4
Cdx2
Lars2
Atp10b
Slc39a11
Stk38l
Teddm3
Pdzd3
Nlrx1
Rgs5
Hsbp1l1
Olfr1037
Epb41l4b
Gna13
Cdh7
Lrrtm2
Htr4
Gas1
Gm29797
D1Pas1
Prkar2a
Slc8a1
Cbfb
Lpp
Slc35d1
Ttc29
Katnal1
Prmt3
Ttc30a1
Slc39a2
Mettl17
Insm2
Lrfn2
Ugcg
Lect2
Hpf1
Radil
Tbx15
Fign
Klhl5
Ccdc182
Cmtr1
Slc25a41
Slc25a23
Angpt2
Gm15501
App
Itsn2
Lyz1
Abca6
Myo1d
Mbl2
Spink7
Nup107
Gsx2
Naaladl2
Tmem156
Cux2
Thbs1
Nedd9
Sox2
Ubl3
Elf5
Jade1
Cep41
Rusf1
Grm5
Rpgrip1
Atp8a2
Vmn1r71
Rhbdd1
Tpbg
Kazald1
Med27
Cds2
Zup1
Pcna
Arhgap10
Sv2b
Pitx2
Lrrc66
Phox2b
Fbxo8
Cep44
Pbx3
Srprb
Sncaip
Nol4l
Map3k7cl
Cuedc1
Krtap28-13
Fgfr2
Zfp663
Gjc1
Tnrc18
Usp4
Gpx1
Gcnt2
Tra2b
Maml2
Mnx1
St7
Uaca
Tcl1
Mad2l2
Draxin
Lrrn3
Fer
Kcnip2
Ccdc171
Shisa3
Gm5544
Fam181a
Rprml
Lyzl6
Hmcn1
Serpinb8
Ebf3
Fscn2
Actg1
Gm4791
Kbtbd12
Fzd8
Nnmt
Gse1
Lpin2
Lin7a
Thsd4
Usp35
Kctd21
Sertad2
Bmpr1a
Zadh2
Tshz1
Golgb1
Eaf2
Ddi2
Zyg11b
Bmpr1b
Slc6a1
Gm5127
Tbc1d9
Bzw1
Gpatch2l
Irx5
Cyp4f17
Exoc4
Cfl2
Hs3st4
Car8
Tmem87b
Fam78b
Ccser2
Cul3
Oxnad1
Dph3
Clec7a
Gpr45
Kifc3
Hs3st3b1
Nell2
Lhx1
Krtap13-1
Akap8l
Zic5
Zkscan1
Tnfsf13b
Adgrv1
Lman1
Tmem53
Cd9
Fau
Dst
Tom1l1
Dip2c
Fcer1a
Kcnip1
Ptprd
Gm4737
Prorp
Mrgbp
Sbpl
Lyrm9
B3galt2
Igsf9
Pgap4
Kazn
Nat8
Lysmd3
Vps41
Acot7
Rps29
Stra6l
Lgalsl
Pde10a
Art3
Ap3b1
Dach1
Ythdf3
Adipor2
H6pd
Skil
Tbc1d5
Galnt14
Pm20d2
Srsf12
Gnb5
Gda
Irs2
Pkd2l1
Cibar2
Pold3
Pdzph1
Ncoa7
Pigm
Srek1ip1
Cwc27
Sp9
Actr3
Kcnj16
Uri1
Ajuba
Rnf165
Trmt2b
Enpp1
Casz1
Fgfr3
Nkx2-2
Zc2hc1a
Mtcl1
Spp2
Elavl4
Crb1
Unc13c
Stxbp5
Rab20
Mbnl1
Pex2
Nsun3
Lrp4
Vapb
Csrnp3
LTO1
Ebag9
Bicd1
Lce1d
Lce1c
Lce1a2
Ppp1r9a
Unc93a2
Gm14137
Gchfr
Tmem200b
Sobp
Dpysl3
Agps
Dact2
Cldn10
Rab30
Zfp143
Hpdl
Defb18
Runx2
Prnp
Prn
Tbc1d32
Crppa
Col4a2
Col4a1
Snca
Fam83b
Slc9a9
Hsd17b3
Serpinb13
Apela
Rps14
Calhm5
Dap3
Ccdc167
Smim8
Bcas1
Slc9b2
Tmem132d
Lama5
Tub
Pof1b
Rpgrip1l
Fto
Asxl3
Ciao3
Vgll1
Slc32a1
Ing3
Gga2
Frem1
Jam3
Erich5
Rabgap1
Ccdc187
Ets1
Wipf1
Git2
Ankrd13a
Mrpl23
Hoxb9
Akain1
Erich6b
Megf9
Exoc2
Sstr2
Msantd3
Cyp51
Lpar4
Sntb2
Glrp1
Mcm6
Baalc
Dscaml1
Hoxd9
Dhx40
Nr2f1
Prrxl1
Olfr960
Fis1
Dock3
H4c11
H2bc14
Sertad4
Mad2l1
Grik3
Lrrc70
Sprr2i
Extl3
Lep
Wdr49
Mcub
Caap1
Tmtc2
Fxn
Gp1bb
Ermn
Slc18a2
Rpl34-ps1
Rpl34
Pde7b
Itga4
Spink1
Icmt
Hes3
Uxs1
Tlk1
Cd83
Foxb1
Prrc1
Dpysl2
Them7
Tmem260
Tmem144
Smim18
Gm3985
Drd2
Pcnx
Gtsf1
Scrn1
Josd1
Gtpbp1
Tmf1
Morn3
Oacyl
Mpped2
Gprc5d
Stk10
Fgf8
Dpyd
9430069I07Rik
Iqgap1
Fbxl3
Megf10
Myo1h
Kansl1l
Foxn4
Hhip
Sdha
Ccdc127
Skap1
Prtg
Il31ra
Cryzl2
Prss48
Pla2g2d
Olfr622
Aff3
Smc4
Ift80
Ppp1r3e
Bcl2l2
Chit1
Pip4k2a
BC005537
Smad3
Kank1
Vdac2
Ubqln5
Ubqln3
Arpp21
Flrt1
Mycl
Qrfp
Nectin4
Klhdc9
Bard1
Zfp473
Vrk3
Dock7
Lbh
Zc3h12c
Spred1
Nsg2
Fmo5
Nrp2
Gm10471
Kpna4
Onecut2
Wdyhv1
Arhgap15
Atad2
Taar9
Nepn
Gopc
Foxp2
Ptpn4
Nrsn1
Gfod2
Akap11
Tspan14
Rasgrp3
Skap2
Prdm2
Usp31
Calcrl
Cep85l
Olfml2a
Nr6a1
Pard3
Spock2
Sos1
Gsg1l2
Glp2r
Glis1
Irx6
Tmem154
Rnf220
Hsd17b7
Nrxn3
Trerf1
Gria4
Tbcel
Rnase12
Rnase11
Foxd3
Mast2
Ankrd35
Thumpd3
Lmo4
Pds5b
Tgif1
Slc16a7
Fry
Parl
Zmiz1
Mfsd10
Primpol
Casp3
Crp
Psme4
H3c6
H2bc8
H2ac8
H3c4
H2bc7
H2ac7
Fbxl5
Nnt
Cnksr2
Zfpm2
Lratd2
Ppp1ccb
Ranbp3l
Rgmb
Gtf3a
Gpr160
Pax6
Gpr37
Apcs
Csta1
Celf4
Gm12789
Itgb8
Mlycd
Exoc6b
Mrps18c
Helq
Gm27021
Emc8
Cox4i1
Scn1a
Spint2
Ppp1r14a
2810006K23Rik
Ppfia1
Snurf
Snrpn
Pkp2
Clmn
Nebl
Ahsa2
Polk
Lrrc15
Vmn1r53
Ebf1
Fbxo16
Polr3k
AY358078
Atg4c
Meis3
D7Ertd443e
Slc38a2
Ranbp6
9930021J03Rik
Pdhx
Apip
Pde9a
Hhat
Lsm12
C1qtnf2
Lama3
Zkscan8
Olfr1366
Mtarc2
Gtsf1l
N4bp2l1
Themis
Hnrnpa1l2-ps2
Creld1
Cblb
Prrx1
Alox5ap
Tnip1
Mtx2
Hesx1
Phf6
Fam161b
Coq6
Jam2
Ski
Flvcr1
Pdss2
Gal3st1
Rbm47
Onecut1
Hes5
Clvs1
Grid2
Rab27a
Rbp2
4930447A16Rik
Dct
Slc30a9
C2cd4a
Ccdc170
Sema6d
Fbxl2
Rb1
Purb
Phldb2
Psma8
Thumpd2
Atxn7l3b
Fam216b
Sh3bp5
Mtif3
Asic2
1700012A03Rik
Dennd1b
Izumo3
Barhl1
Olfm1
Pdia5
Zfp423
Iqca
Ccl7
Ccl2
Filip1l
Abra
Arid5b
Fmo2
Slc35d3
Gm4952
Snx7
Unc93a
Ear10