ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416181 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◣ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Crkl
Pdlim5
Hdx
Alb
Snrnp27
Mxd1
Riox2
Gm973
Zfp330
C1ql3
Palld
Map4k5
Atl1
Ubl4b
Ackr4
Prdm13
Srpx
Gnat3
Fam174a
Cacna1c
Gpr84
Plxnc1
Rarb
Ddx1
Bend4
Rab19
Slc37a3
Ece1
Otp
Ifrd1
Slc5a12
F11r
Zc2hc1c
Tcstv3
Eps8
Foxp1
Dmrta1
Hoxc6
Hoxc5
Hsdl2
Synpo
Pou3f2
St3gal2
Hoxa4
Dnajb13
Nkx6-1
Cemip2
Vmn2r23
Pou1f1
G2e3
Mllt3
Acsf2
Tmem268
Atp6v1g1
Efcab5
Rtl1
Slc27a4
Hoxb6
Hoxb5
Ndnf
Mmrn1
Tox
Prmt3
Atic
Ccdc187
Hoxc4
Lpp
Gtf2h4
Cacnb2
Hoxd4
Hoxd3
Lsamp
Pdgfc
Foxn3
Scube2
Trio
Trib2
Pik3r1
Aldh1a2
Dcbld2
Cpsf1
Hoxb4
Hoxb3
Arfgef1
Rtn1
Myo10
Zfp503
Pou2f1
Slc31a2
Efnb2
Lrp12
Lratd2
Atp8a1
Il20rb
Ffar4
Krt222
Cacna2d1
Cxcl12
Pbx3
Smad1
Pkdcc
Cep128
Cdca8
9930104L06Rik
Aff3
Hoxc8
Ccdc33
Lrrc18
Atp1b4
Nrg1
Dph5
Dnah5
Alyref2
Prkar2b
Lep
Pgbd5
Cul3
Pax8
Zadh2
Tshz1
Neurod4
Fyn
Epha5
Rap1gds1
Kif13b
Angptl7
Gp1bb
Dtx4
Met
Pbx1
Marchf3
Copz1
Mecom
Mafa
Rnf165
Gdf10
Crp
Jakmip2
Scmh1
Gpx2
Ubl3
Pgm2
Psd3
Olfr298
Bicd1
Cntnap2
Hoxa2
Hoxa1
Thumpd2
Dll1
Rab22a
Sstr2
Rbfox2
Zdhhc2
Adtrp
T2
Mcub
D6Ertd527e
Phc2
Adh5
Abcc4
Olfr646
Slc4a10
Gapdh
Esrrg
Rara
Dbx2
Cxxc4
St8sia2
Hipk3
Wt1
Baalc
Tbc1d22a
Tecta
Lrguk
Kifc3
Adgrv1
Pitpnc1
Psmd12
Prickle2
Nap1l1
Lyrm9
Fgd3
Tjp2
Hpf1
Fam160a1
Olfr172
Cradd
Tshz3
Glp1r
Epb42
Polr3gl
Lix1l
Ankrd34a
Ccdc182
Dach1
Prickle1
Map6
Dmrt3
Srsf6
Runx1t1
Csrnp3
Mrpl36
Uncx
Asxl3
Higd1c
Mnx1
Plpp6
4430402I18Rik
H6pd
Dhx8
Kcnip2
Shisa3
D1Pas1
Lhx1
Mtif3
Map3k7cl
Lrrn1
Epb41l4b
Slc22a1
Map4
Tmem184a
Psmg3
Ermn
Pde9a
Dctd
Ppm1e
Hpdl
Toe1
Mutyh
Sgcd
Pde10a
Tnfsf13b
Arglu1
Ociad2
Gm14092
Hoxb8
Hoxb7
Clvs2
C6
Grik4
Clasp2
Ptprd
Olfr572
Olfr571
Dusp5
Niban1
Clmn
Itga4
Btg2
Grpel2
Foxp2
Rbp2
Crb1
Slc25a41
Slc25a23
Myo1d
Ttc30a1
Mab21l2
Grid2
Lemd2
Csrp3
Dennd5a
Nme6
Grap2
Robo2
Uri1
Cited2
Hs3st3b1
Gtf2a1
Krtap19-2
Krtap19-1
Ankrd6
App
Hagh
Fahd1
Nkx2-2
Msrb2
Fam78b
Mpzl3
Skil
Fgf13
Radil
B3galt1
Meis3
Nxpe4
Pcnx
Ror2
Olfm2
Ppp1r3e
Bcl2l2
Oxnad1
Dph3
Olfr898
Ogfod1
Nudt21
Gas1
Pitrm1
Rptor
Dst
Prdm6
Ksr1
Tra2b
Zfp608
Mdm2
Psmd7
Rab27a
Gucy1a1
Tmco5
Gfra3
Hoxa6
Hoxa5
Tmem144
Gria4
2610528A11Rik
Vps41
Slc44a3
Spag17
Ccdc174
Mbp
Lect2
Asic4
Pkhd1l1
Gpc6
N4bp2l1
Itgb8
Sesn1
Abca16
Mgat5b
Acyp1
Atp5g2
Ufsp1
Trip6
Srrt
Nfia
Nin
Mbnl1
Schip1
Zic5
Evx2
Lrrc66
Pknox2
Hoxd8
Drc7
Mapk8
Brd1
P4ha3
Maml2
Phactr3
Slc6a1
Mapre1
Myh10
Cpsf4l
Rhbdd1
Frg1
Fzd8
Greb1
Map1b
Calm1
Iglon5
Olfr1037
Cnot2
Nebl
Tox2
Ptn
Olfr1024
Notch1
Spink1
Dock3
6820408C15Rik
Wdr18
Oacyl
Elavl4
Rasgrp3
Cd83
Dnm3
Arhgap15
Tmigd1
Tpbg
Ivd
Rasal2
Fam234b
Nps
Tmem200b
Slain1
Vwf
Ncoa5
Fau
Lrrn3
Dap3
Mfap3l
Katnal1
Tnfsf8
Cd47
Art3
Tcim
1700010B08Rik
Phf6
Gm4791
Kcnip1
Lama5
Sprr2i
Lpgat1
Gpr45
Dach2
Zfp710
Slc32a1
Neu2
Ngef
Skap2
Exoc2
Tbc1d9
Ubqln2
Arpp21
Nlgn1
Lrrtm2
Stk10
Crppa
1700012A03Rik
Lrmp
Wdr47
Mink1
Irx1
Gcnt2
Scn1a
Ppp2r2d
Mapk1ip1
Nr0b1
St8sia4
Fbxw7
Rapgef6
Pik3c2g
Tub
Cbfa2t3
Gprc5d
Slc6a5
Cited4
Krtap13-1
Tanc1
Ccdc162
Vta1
Atp8a2
Frem1
Grm5
Armc5
9130023H24Rik
Olfr1098
Mapk9
Cldn34d
Ammecr1l
Speer4a
Pdzph1
Gm527
Nr2f1
Actr3
Sox21
Mpv17l
Pdxdc1
Arid5b
D430041D05Rik
Tmem156
9430069I07Rik
Stxbp5
Pkd2l1
Ddi2
Ptpn6
Grcc10
Bzw1
Sptssa
Gm5127
Coq10a
Ankrd52
Gja1
Vapb
Tmem53
Rph3al
Hoxa7
Hoxa3
Xpr1
Slc25a39
Tph2
Bmp1
Myom3
Galr3
Myo5a
Cox7a2l
B3galt2
Ncoa7
Tle3
Mmp28
Sv2b
Snca
Mitf
Scgn
Stk33
Gse1
Fign
Eif4e3
Neurog2
Maml3
Tmem126b
Zfp516
Tmem126a
Sox2
Stxbp6
Elf5
A530016L24Rik
Ins1
Fam241b
Rprm
Gm27021
Emc8
Cox4i1
Barhl1
Cubn
Olfr1034
Mad2l1
Slc39a2
Mettl17
Etfbkmt
Pex5l
Nfib
Ush2a
Lpar6
Zfp663
Rprml
Lyzl6
Olfr806
Cybc1
Narf
Eya2
Tmem260
Uchl4
Hmcn1
Prkar2a
Nol4l
Prrc1
Ap3b1
Srsf10
Pnrc2
Prop1
Olfr1378
Hhip
Dad1
Abhd4
Arhgap28
Cdx2
Tob1
Vdac2
Sobp
Ntn1
Gpr160
Ptger2
Olfml1
Srsf9
Usp4
Gpx1
Slc18a2
4930447A16Rik
Utp11
Nedd9
Pax6
Rab28
Zyg11b
Med27
Unc93a
Bmpr1a
Plcb4
LTO1
Crybg3
Percc1
Ccdc154
Pou3f3
Wnt5a
Dpysl3
Meiob
Rab37
Dcc
Man1a2
Angptl4
Unc93a2
Gsx2
Lysmd3
Dpf3
Pla2g2d
Morf4l1
Adgrl2
P4ha1
Ugcg
Ebf1
Ccno
Ngdn
Polr2m
Foxb1
Tubb6
Pccb
Pigw
Myo19
Ggnbp2
Abhd6
Cdk17
Celf4
Qsox2
Lrfn2
Nap1l4
Nrp2
Rgs3
Cntf
Stk38l
Sema4b
Ubtd1
Mms19
Irx5
Mad2l2
Draxin
Atp9b
Gtf2ird2
Ccdc171
Fscn2
Actg1
Hs3st4
Dct
Rhcg
Snx7
Arid1b
Treml4
Apela
Pard3
Srprb
4930550C14Rik
Mprip
Ccl7
Ccl2
Fam181b
Megf10
Smarcal1
Tal2
Map2
Gna13
Trim59
Sox5
Cd40lg
Fam181a
Olfm1
Slc38a2
Trim2
Pla2g2e
Gm13030
Sdc1
4933424G06Rik
Zfp473
Vrk3
Ddx6
Slc4a8
Hsbp1l1
Tcl1
Akap8l
Hoxd9
Alox5ap
Meox1
Cmtr1
Zfp326
Manbal
Mrvi1
Nkx2-6
Ing3
Rnf220
Zkscan1
Ccn1
Susd1
Kcnip4
Wwox
Ivl
Smcp
Ttyh3
Ccdc60
Cd9
Degs1
Hspa14
Cdnf
Lama3
Asmt
Zfp703
Ust
Adnp2
Kazn
Lars2
Dip2c
Parm1
Smim11
Kcne2
Flrt1
Cyp51
Srgap2
Fam72a
Hivep2
Spred1
Rps29
Ormdl3
Lrrc3c
Aebp1
Lce1h
Lce1g
Lmo4
Stn1
Zc2hc1a
Gga2
Tmem132d
Piwil4
Kbtbd12
Cda
Stk32a
Hnmt
Gm14137
Gchfr
Extl3
Spink7
Ccdc167
Mycl
Gm12657
Plaa
Thbs1
Casz1
Ttr
Rab30
Gsg1l2
Glp2r
Lrig1
Pitx2
Lipo4
Gm21698
Gm21680
Ctif
Sp9
Tcf12
C8b
Top2b
Uap1
Id1
Entpd6
Plch1
Ndfip1
Vamp9
Stab2
Smim8
Unc13c
Lpo
Fgfr2
Tti2
Atrn
Gm3985
Hapln1
Actr3b
Nmnat3
Ttc39b
Glis1
Irs2
Arhgap36
Gphb5
Clptm1l
Ttc21b
Fbxo16
Bahcc1
Acot7
Nek7
Rab20
Havcr2
Sema6b
Lrg1
Golgb1
Eaf2
Spp2
Nrxn3
Cep41
Skida1
Mllt10
Ppp1r9a
Mgat5
Slc39a11
Nup107
Pik3r4
H4c11
H2bc14
Gnb5
Trp53i11
Ptger4
Mtnr1b
Plcz1
Capza3
Rnf125
Hoxb9
Trhr
Slc30a5
Mettl2
Gm21663
Emcn
Brox
Aida
Smg9
Marchf10
Myoc
Plppr1
Fam107a
Arfgef3
Dpyd
Naa11
Klhl5
Slc17a6
Eya1
Gm4737
Plpp7
Aadacl2fm1
Acsl5
Setd4
Cbr1
Clstn2
Pdia5
C330018D20Rik
Rundc3a
Tbcel
Itpk1
Taar2
Sh2d3c
Ezh2
Ascl1
Fam135b
Ago1
Gtsf1l
Zfp42
Col25a1
Rbm25
Cdca7
Zfhx4
Slc9a9
Zup1
Slc14a2
Nr3c2
Olfr1441
Olfr891
Scrn1
Dact2
Gm18905
Gm15517
Acp4
Reln
Crb2
Med13l
Cog6
Lrp4
Nipal3
Purb
Fstl5
Nrp1
1700019D03Rik
Fhdc1
Cdh7
BC005537
Fam110a
Exoc4
Zbtb20
C1qtnf2
Foxd3
Tnfrsf21
Tox3
Tubb2a
Myf5
Nxph1
Nsmce3
Pdzd3
Nlrx1
Gm5544
Gucy1b2
Atp10b
Akap6
H2-M11
St7
Nxpe2
Hhat
Hlcs
Gtf3a
Macrod1
Washc4
Cox20
Aldh1l2
Lhfpl2
Il31ra
Atxn7l3b
Kpna1
Rpgrip1l
Fto
Srek1ip1
Cwc27
Git2
Ankrd13a
Pex2
Megf9
Jazf1
Jam3
Tlk1
Apcs
Dlk1
Adamts16
Izumo3
Mdh1b
Fastkd2
Lpin2
Vmn1r53
Nipsnap1
Lrrc4
Mrps36
Ccbe1
Zfp143
Baz2b
Rps10
Dpysl2
Gal3st1
C2cd4a
Agmo
Cep85l
Tcirg1
Arg1
Slc1a3
Pakap
Nell2
Kbtbd11
Cibar2
Gpatch2l
Rps14
Phox2b
Cyp1b1
Zfp397
Runx2
Dnaja3
Coro7
Apold1
Zfhx2
Thtpa
Thsd4
Traf3
Skap1
Lrrc15
Neurog3
Rasgrp2
Ajuba
Cfl2
Dthd1
Fbxo8
Cep44
Erg
Ajm1
Acvr1c
Rere
Tle1
Krt9
Kcng4
Iqca
Ddx20
Inka2
Pcgf5
Camk4
Arsj
Ppp1ccb
Lrch3
Sybu
Kcnt2
Pik3r5
Olfr1097
Capn8
Irx6
Lhx4
Gramd1a
Krt13
Sav1
Rag1
Ythdf3
Sall1
Tmem255a
Tom1l1
Jam2
Sema6d
Etv3
E130308A19Rik
Slc43a1
Ptprr
Poglut3
Trerf1
Ireb2
Elmo2
4933402D24Rik
Armcx1
Hand1
Zc3h12c
Wdr49
Cnga3
Lrrc4c
Zdhhc7
Trmt2b
Fam171b
Pcnx3
Map3k11