ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416195 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◢ SRX7416194: Embryoid Bodies

◣ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Ackr4
Srpx
Ddx1
Snrnp27
Mxd1
Riox2
Bend4
Prdm13
Alb
Srsf6
Efcab5
Hoxd4
Hoxd3
Palld
Scube2
Ubl4b
Eps8
Gpr84
Aldh1a2
C1ql3
Hoxa4
Dnah5
Acsf2
Nkx6-1
Ndnf
Gm973
Zfp330
Pdgfc
Rarb
Met
Cacna1c
Gnat3
Rtl1
Il20rb
Tbc1d22a
Map4k5
Atl1
Hoxc8
Efnb2
Lrp12
Hoxb6
Hoxb5
Crkl
Hoxc4
Hdx
Dmrta1
Hoxc6
Hoxc5
Clvs2
Gas1
Epb41l4b
Vwf
Pdlim5
Atp5g2
Cep128
Dtx4
F11r
Mafa
Pkdcc
Nrg1
Dcbld2
Lsamp
Lrrc18
Atp1b4
Hoxb4
Hoxb3
Zc2hc1c
Pgm2
Ccdc171
Pou3f2
Ttc30a1
Hoxb8
Hoxb7
Kif13b
Kcnip1
Fam181a
Marchf3
Otp
Cacna2d1
Pou2f1
Lrfn2
Rtn1
Gtf2a1
Slc31a2
Foxn3
Dnajb13
Pou3f3
Vta1
Zfp326
Hoxd8
Cacnb2
St3gal2
Brd1
Zdhhc2
Dll1
Fam174a
Nkx2-2
Lhx1
Hoxa2
Hoxa1
Prkar2b
Abca16
Polr3gl
Lix1l
Ankrd34a
Rnf220
Epha5
Tra2b
Mllt3
Krtap19-2
Krtap19-1
Neurog2
Csrp3
Ptger2
Ccdc33
Pknox2
Tox
Utp11
Gucy1a1
Rab19
Slc37a3
Slc27a4
Wdr47
Smad1
Dph5
Hoxa6
Hoxa5
Hoxa7
Hoxa3
Cnga3
N4bp2l1
Lrrn1
Hoxd9
Tmem144
Synpo
Copz1
Arglu1
Olfr1441
Plxnc1
Uap1
Gfra3
Atp9b
Sv2b
Zfp503
Cxcl12
Dbx2
Gtf2h4
B3galt1
Tecta
Pbx1
A530016L24Rik
Slc22a1
Tob1
Mrpl36
Bahcc1
Mcub
Gm14092
9430069I07Rik
Sox21
Fgd3
Sgcd
Cited2
Notch1
Plcb4
Ccn1
Cldn34d
Nr2f1
Lrguk
Enpp3
Angptl7
Sesn1
Cradd
Ncoa7
Lpar6
Foxp1
Hibadh
Csrnp3
Hand1
Sptssa
Slitrk6
4933424G06Rik
Maml2
Pou1f1
Sdc1
Niban1
Trim2
D430041D05Rik
Frg1
Myo10
Lep
Pbx3
Cd47
Hnrnpa1l2-ps2
Usp15
Htr3b
Ffar4
Psd3
Irx5
Map1b
Fscn2
Actg1
Trio
Zfp663
Ociad2
Rasgrp3
Arsj
Myo1d
Arfgef1
Glp1r
Hsdl2
Fbxo28
Tle3
Ubqln2
Cemip2
Fgfr2
Tmem200b
Lpp
Gda
E030030I06Rik
Raet1e
Raet1a
Olfr646
Ifrd1
Calcrl
Grm5
Ptger4
Krt23
Tnfrsf21
Xpr1
D6Ertd527e
1700012A03Rik
Tnfsf8
Lce1h
Lce1g
Ppp2r2d
Mapk1ip1
Wdr49
Mapk8
Spag17
Pik3cg
Prop1
Olfr1378
Mecom
Ugcg
Gp1bb
Colca2
Crp
Gpc6
Nrp1
Olfm2
Hipk3
Krt222
Atp8a2
Zadh2
Tshz1
Gcnt2
Cox7a2l
Hs3st3b1
Rgs3
Tmem184a
Psmg3
Bard1
Ece1
Neurod4
Slc6a1
Akain1
Wnt5a
P4ha3
Tmco5
Hhat
Lemd2
Ankrd6
App
H2-Q9
H2-Q7
Tmem263
Fhl4
Plpp6
4430402I18Rik
Cntnap2
Trib2
Kcnip2
Ogfod1
Nudt21
Mnx1
Tjp2
Mettl8
Prickle2
Kifc3
Olfr898
Cmss1
Capn8
Teddm3
Crb1
Rap1gds1
Arid1b
Dthd1
Ndufc2
Lysmd3
Skap2
Map4
Vapb
Gprc5d
Zc3h12c
Dad1
Abhd4
H6pd
Atp8a1
Mrvi1
Rps6kc1
Angpt2
Wdr95
Scn1a
Elf5
Mta3
Exoc4
Trim59
Runx2
Jakmip2
Ammecr1l
2700062C07Rik
Cadm1
Sp9
Nfib
Ubtd1
Mms19
Calm1
Adgrl2
Foxp2
Clasp2
Sall1
Pgbd5
Map6
Lratd2
Zbtb20
Prmt3
Lyrm9
Unc93a2
Celf4
4933402D24Rik
Tox2
Ezh2
Kitl
T2
Uchl4
Syk
Mrps33
Mad2l2
Draxin
Mbp
Wwp1
Tub
Treml4
Epb42
Prss48
Gna13
Mei4
Olfr1024
Hsd17b3
Tmem260
Apela
G2e3
Tmem53
Kcnt2
Phlpp1
Radil
Nfia
Mgat5b
Txlng
Comtd1
A430057M04Rik
Mbnl1
Olfr298
Rbfox2
Phf6
Pik3r4
Slc5a12
Rbp2
Hoxb2
Fbxw7
Ufsp1
Trip6
Srrt
Scrn1
Gtf2ird2
Nav2
Gbx2
Tcstv3
Ncoa5
Oacyl
Fgf13
Nap1l4
Atic
Gpx2
Tmem268
Atp6v1g1
Mier1
Wdr78
Grid2
Atrn
Arhgap15
Dnm3
Hhip
H4c11
H2bc14
Ccdc187
Olfr1034
Lpo
Gsx2
Prkar2a
Mpzl3
Srprb
Gm527
Frmd4b
Myh10
Dhx8
Baz2b
Krtap28-13
Rara
Gpr45
Pou4f1
Gca
Myom3
Pdzph1
Crabp1
Cubn
Lrrc15
Rhbdd1
Sox2
Tmtc4
Cdx2
Dach1
Krtap13-1
Zfc3h1
Thap2
Map3k7cl
Ntn1
Olfr1
Hnmt
Phactr3
Med13l
Btg2
Plcz1
Capza3
Rpgrip1
Man1a2
Brox
Aida
Olfr1037
Sybu
Mdm2
Stxbp6
Asxl3
Msrb2
Tspyl5
Mtif3
Eif2ak4
Gpr176
Hpf1
Gm5544
Mdga1
Zyg11b
Adh5
Zfp9
Tnfsf13b
Art3
Havcr2
Abcc4
Pax8
Zfand3
Pakap
Celf2
Pde1a
Reln
Tpbg
Dach2
Fam241b
Zfhx4
Gm5127
Angptl4
Tle1
Serpinb2
Mib1
Camk4
Schip1
Adtrp
Thumpd2
2810006K23Rik
Esrrg
Arl4c
Rnase12
Rnase11
Pkd2l1
Rhcg
Zfpm2
Pik3r1
Olfr572
Olfr571
Gria4
Nek7
Elf2
Ptprd
Lars2
Nrxn3
Flrt1
Kansl1l
Phox2b
Nap1l1
Olfr891
Ythdf3
Hspa14
Cdnf
Vmn2r23
Slc44a3
Fcer1a
E130308A19Rik
Rfk
Ing3
Gdf10
Gpr160
Zfp703
Cct8
Kpna2
Zfp811
Dap3
Ebf3
2510009E07Rik
Smim11
Kcne2
Cd9
Rnf165
Uri1
Gse1
Epdr1
Pitrm1
Slc32a1
Gm4737
Bcar3
Itgb8
Nme6
Serpinb8
Smug1
Gjc1
Erc2
Ptn
Sstr2
Manbal
Rasal2
Bcap29
Cpb2
Nkx2-6
Gm4951
Prickle1
Extl3
Fam71e2
Ror2
Slc4a8
Grik4
Arhgap26
Cpsf1
Aldh1a3
Cxxc4
Speer4a
Lrrc66
Hlcs
Kazn
Tcf12
Arpp21
Atp10b
Git2
Ankrd13a
Slc1a3
Vamp9
Socs6
Fasn
Spen
Olfr1098
Gdi2
Sytl3
Stra6l
Cyp19a1
Tanc1
Fam135b
Skap1
A930009A15Rik
Upk3bl
Fstl5
Dlk1
Samd5
Mtnr1b
Rgmb
Etfbkmt
Rnf125
Klhl5
Lman1
Slc17a6
Lrrn3
Bmpr1a
Ccdc182
Dpyd
Otor
Ubl3
Clstn2
Cntn1
Sema6d
Zfp143
Tox3
Elovl5
Spg21
Sobp
Apbb2
Tshz3
Ccbe1
Zfp608
Fezf2
Frem1
Mmrn1
Dmrt3
Skida1
Eya1
Rab22a
Mllt10
Pof1b
Hs3st4
Naaladl2
Meis3
Adh1
Txk
Olfr172
Rab27a
Olfr519
Ncam2
Zfp710
Lrrtm2
Mafb
Plpp7
Tcim
Crb2
Trerf1
Muc16
Jam2
Cobll1
Shisa3
Fyn
Srsf9
Spink1
Rxfp3
Nedd9
Ccdc174
Lect2
Ctnna3
Ksr1
Gm29797
Cyp4f17
Spag9
Dcc
Alox5ap
Ttc39b
Myo5a
C1ql1
Unc93a
Olfr960
Pdzd3
Nlrx1
Ebag9
Olfr1385
Luzp2
Stxbp5
Asic4
Dbx1
Usp4
Gpx1
Lpar4
Ndn
Pabpc1
4930550C14Rik
Cryzl2
Kpna1
Cttnbp2
Phc2
Pcdh19
Olfr599
Olfr598
Olfr597
Kbtbd12
Gm4791
Ap3b1
Mad2l1
Rapgef6
Stpg2
Crybg3
Ahi1
Wfdc6a
Eppin
Mtx2
Mfap3
Fam114a2
Foxb1
Mn1
Megf10
Ascl1
Mfsd9
Plch1
Zfp423
Invs
Erp44
Pik3c2g
Txndc11
Tbc1d5
Aff3
Higd1c
Bicd1
Nynrin
1700011L22Rik
Dst
Ppp2r3a
Aktip
Pkhd1l1
Dab1
Med4
Pcgf5
Klhl1
Gpr37
Lyz1
Spink7
Med27
Tlk1
Nlgn1
Entpd5
Bbof1
Dock10
C330018D20Rik
Robo2
Gnb5
Ift81
Kcna4
Gja1
Golgb1
Eaf2
Cd3g
Cd3d
Slc9b2
Rbm20
Fzd8
Psme4
Iigp1
Qsox2
Kif26b
Irx1
Runx1t1
Cep41
Ppp3ca
Cyren
Megf9
Ctdsp2
Avil
Nps
Toporsl
Pla2r1
Rps10
Gm14137
Gchfr
Zeb2
Fam171b
Neu2
Ngef
Evx2
Nnmt
BC005537
Ubqln5
Ubqln3
Odf3l1
Gli2
Pitpnc1
Psmd12
Camsap2
Phf10
Hapln1
Nacc2
Nin
Cyp27a1
Tnpo1
Adamtsl3
Ccdc136
Cpeb2
Ddi2
Twist1
Msl2
Pde10a
Ebf1
Itsn2
Sytl2
Fzd10
Pkp2
Map2
Slc26a8
Mapk14
Btbd8
Thbs1
Paip1
Nxph1
Tbc1d9
Cited4
Purb
Fgfr3
Vgll1
Chchd6
Wnt1
Ddn
Tbce
Cdh12
Id1
Vegfc
Hagh
Fahd1
Tmigd1
Stk32a
Lhfpl3
Clmn
Thumpd3
Grpel2
Stk33
Tnrc6b
Iglon5
Cul3
Dtna
Il31ra
Rtn4rl1
1700010B08Rik
Ccl7
Ccl2
Dip2c
Nepn
Gopc
Slc25a39
Tet2
Rundc3a
Wipf1
St8sia2
Tll1
Dct
Lrrc70
Ift27
Irx6
Gm9949
Adrb2
Cdk17
Slc30a5
Klk4
Znrf3
Nup107
Fads2b
Rfng
Gps1
Nipsnap1
Pccb
Zc2hc1a
Cavin4
Ech1
Hnrnpl
Vangl1
Micu1
Erich6b
C2cd4a
Ccdc162
Olfr1337
Rag2
Iftap
Arid3b
Olfml2a
Nr6a1
Smim8
Abr
Mettl2
Tph2
Wt1
Bzw1
Apold1
Adgrl4
Meis2
Fam78b
Kcnj16
Iqsec1
Tmem132b
Il1rn
Ngdn
Qrfp
Lrrc72
Pcnx
Ins1
Fam126a
Sh3kbp1
Fam222a
Pdzk1ip1
Arid5b
Pde9a
Ldlrad3
Apol9a
Hpdl
Baalc
St7
Egr2
Rffl
Ptprr
Cog6
U2af1
Ap3s1
Mapre1
AB010352
Sema4b
Cfl2
Nbdy
Hivep2
Ric1
Klhl9
Zfp473
Vrk3
Meox1
Slc35d1
Smarcal1
Tbx15
Grm7
Rab28
Tmed10
Mmp28
Gm18905
Gm15517
Acp4
Olfr1097
Lpar5
Trim27
Mrpl23
Shroom3
Hdac9
Smyd3
Katnal1
Dnase2b
Nipbl
Lrrc4c
Rprml
Lyzl6
Percc1
Ccdc154
Agtr1a
Dpysl3
Psmg2
Cep76
Nostrin
Vmn1r71
Ins2
Thrb
Cyp4v3
Skil
Lmo4
Hmcn1
Bcor
Nebl
Oxr1
Srek1ip1
Cwc27
Rgs8
Fggy
Prokr1
Rorb
Cldn20
Uncx
Ptpn4
Lin7a
Atxn7l3b
Gna12
Dcp1b
Tmem132d
Kank1
Elavl4
Mab21l2
6820408C15Rik
Srbd1
Grap2
Snca
Acot7
Plscr5
Tom1l1
4930447A16Rik
Lpin2
P2ry12
Pik3c2a
Ubc
Htr4
Ctbs
Plaat1
Olfr1158
Rps11
Rpl13a
Stk38l
Rab37
Gm36712
Dock3
Prdm6
Nxpe4
Fis1