ChIP-Atlas: Target genes

Potential target genes for Hoxc9

Query protein: Hoxc9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7416194 | Embryoid Bodies
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hoxc9's Target genes

◢ Hoxc9: Average

◢ SRX7416180: Embryoid Bodies

◢ SRX7416181: Embryoid Bodies

◣ SRX7416194: Embryoid Bodies

◢ SRX7416195: Embryoid Bodies

◢ SRX7416203: Embryoid Bodies

◢ SRX7416204: Embryoid Bodies

◢ Hoxc9: STRING

Ackr4
Riox2
Srpx
Ddx1
Snrnp27
Mxd1
Gpr84
Efcab5
Alb
Hoxd4
Hoxd3
Nkx6-1
Prdm13
Hoxa4
Palld
Scube2
Ubl4b
Bend4
Rtl1
Aldh1a2
C1ql3
Gnat3
Met
Acsf2
Srsf6
Hoxb6
Hoxb5
Hoxc4
Cacna1c
Hoxc6
Hoxc5
Rarb
Mafa
Ndnf
Gm973
Pdgfc
Il20rb
Dcbld2
Dnah5
Efnb2
Pdlim5
Map4k5
Atl1
Eps8
Epb41l4b
Hoxc8
Dmrta1
Gas1
Nrg1
Hdx
Dtx4
Clvs2
Lsamp
Pou3f2
Hoxa2
Hoxa1
Atp5g2
Crkl
Cep128
Hoxb4
Hoxb3
Zfp330
Tox
Lrp12
Pkdcc
Atp1b4
Cacna2d1
Zc2hc1c
Dph5
Tbc1d22a
Ccdc33
F11r
Ccdc171
Vwf
Lrrc18
Kif13b
Pou2f1
Utp11
Marchf3
Vta1
Hoxa6
Hoxa5
Cldn34d
Epha5
Hoxd8
Tra2b
Nkx2-2
Lhx1
Rnf220
Smad1
Ttc30a1
Pou3f3
Fam174a
Gucy1a1
Dll1
Cacnb2
Kcnip1
St3gal2
Zfp503
Hoxa7
Hoxa3
Lrrn1
Otp
Zfp326
Hoxb8
Hoxb7
Gtf2a1
Foxn3
Pknox2
Synpo
Fam181a
Zdhhc2
Olfr1441
Ptger2
Mllt3
Prkar2b
Krtap19-2
Krtap19-1
Neurog2
Mrpl36
Csrp3
Plxnc1
Slc31a2
Pbx1
Rab19
Slc37a3
Lrfn2
Abca16
Sox21
Rasgrp3
Tle3
Arglu1
Hsdl2
Map1b
Pbx3
Tob1
Dnajb13
Cnga3
Polr3gl
Lix1l
Ankrd34a
Dbx2
Arfgef1
Gfra3
Slc27a4
4933424G06Rik
9430069I07Rik
Plcb4
Csrnp3
Spag17
Sptssa
Mcub
Ffar4
Ifrd1
Nr2f1
Pgm2
Cited2
Lpar6
A530016L24Rik
Hoxd9
Foxp1
Tecta
Tmem144
Sdc1
Grm5
Sgcd
Hipk3
E030030I06Rik
Raet1e
Raet1a
Sesn1
Cxcl12
Hnrnpa1l2-ps2
Cox7a2l
Ccn1
Gm14092
Ugcg
Ece1
B3galt1
Niban1
Myo10
Mecom
Zadh2
Tshz1
Mbp
Tnfsf8
Wdr47
Ociad2
Hibadh
Olfm2
Rtn1
Pik3cg
Bahcc1
Enpp3
Lep
Myo1d
Cradd
Lrguk
Sv2b
Notch1
Brd1
Nrp1
Calcrl
P4ha3
Neurod4
Tnfrsf21
Uap1
Cemip2
Rgs3
Copz1
Tmem200b
Usp15
Skap2
Wdr49
Htr3b
Bard1
Atp9b
Olfr1024
Txndc11
Ptger4
Frg1
Maml2
Olfr646
Dthd1
Psd3
Apela
Gda
Ogfod1
Nudt21
Zc3h12c
Prmt3
Exoc4
N4bp2l1
Ncoa7
Rap1gds1
Ankrd6
Krt222
Nfib
Ncoa5
Gprc5d
Fgd3
Wnt5a
H2-Q9
H2-Q7
Glp1r
Prop1
Olfr1378
Gtf2h4
Angptl7
Clasp2
Trib2
Mier1
Wdr78
Fgfr2
G2e3
Fscn2
Actg1
Gcnt2
Tmem263
Fhl4
Slc22a1
Cntnap2
Tjp2
Wdr95
Wwp1
Mapk8
Hhat
Mrvi1
Fbxo28
Lemd2
Ndufc2
Gsx2
Capn8
Slitrk6
Mad2l2
Draxin
Epb42
Pou1f1
Hnmt
Plpp6
4430402I18Rik
Oacyl
Irx5
Uchl4
Trio
Mbnl1
App
Map6
Slc6a1
Tmtc4
Ubqln2
Lysmd3
Vapb
Prss48
Hand1
Srprb
Scn1a
Nfia
Myh10
Fbxw7
Mei4
Tmco5
Zfp663
Cd47
Krtap13-1
Dad1
Abhd4
Trim59
Pgbd5
Olfr298
Calm1
Asxl3
Trim2
Colca2
Phf6
Slc5a12
Ubtd1
Mms19
Gna13
Hsd17b3
Ammecr1l
Krt23
Rps6kc1
D430041D05Rik
Kcnt2
Ppp2r2d
Mapk1ip1
Zbtb20
Gpc6
Sox2
Arid1b
Pkd2l1
Phlpp1
Olfr898
Rbp2
Lce1h
Lce1g
Slc32a1
Adtrp
Cadm1
Lpp
Tox2
Pax8
Atp8a1
4933402D24Rik
D6Ertd527e
1700012A03Rik
E130308A19Rik
Arsj
Cmss1
Radil
Gp1bb
Mnx1
Xpr1
Crp
Crb1
Runx2
Eif2ak4
Gpr176
Angpt2
T2
Tmem268
Atp6v1g1
Lpo
Gdf10
Tle1
Mdga1
Rhbdd1
Rpgrip1
Mrps33
Gbx2
Tub
H6pd
Btg2
Adh5
Atp8a2
Tcstv3
Brox
Aida
Map4
Teddm3
Tnfsf13b
Akain1
Kcnip2
Tspyl5
Ptprd
Sall1
Treml4
Kifc3
Prickle2
Klhl5
Ufsp1
Trip6
Srrt
Gm527
Cpsf1
Sp9
Erc2
Shisa3
Naaladl2
Jakmip2
Zfpm2
Scrn1
Plcz1
Capza3
Cubn
Tmem260
Gpr45
Mta3
Fgf13
Camk4
Krtap28-13
Pof1b
Txlng
Sybu
Rara
Kitl
Mpzl3
Comtd1
A430057M04Rik
Atic
Nap1l4
Elf5
Spen
Tox3
Cul3
H4c11
H2bc14
Foxp2
Adgrl2
Abcc4
Grid2
Art3
Med13l
Nlgn1
Unc93a2
Stxbp6
Lratd2
Olfr572
Olfr571
Flrt1
Cxxc4
Phactr3
Ptn
Hhip
Prickle1
Esrrg
Olfr1037
Etfbkmt
Nap1l1
Rfk
Frmd4b
Nrxn3
Rnase12
Rnase11
Tmem184a
Psmg3
Cdx2
Gm5544
Bcar3
Gria4
Rgmb
Ebf3
Syk
Gjc1
Cct8
Arl4c
A930009A15Rik
Dhx8
Frem1
Mgat5b
Gm4951
Ezh2
Kpna1
Manbal
Pla2r1
Gm5127
Zfand3
Rbfox2
Gpx2
Dach1
Phox2b
Hs3st3b1
Aff3
Mapre1
Nin
Ppp2r3a
Lrrc15
Rasal2
Zfp710
Rab22a
Fyn
Celf4
Olfr891
Lars2
Baz2b
Gpr160
Mtif3
Med27
Mfap3
Fam114a2
Dap3
Ebf1
Ebag9
Nkx2-6
Ntn1
Cd3g
Cd3d
Pitrm1
Nme6
Slc26a8
Mapk14
Pdzph1
Map2
Gse1
Slc4a8
Prkar2a
Gca
Atrn
Myom3
Hoxb2
Zfhx4
Nav2
Lpar4
Smug1
Higd1c
Gm4737
Crabp1
Ccdc187
Lrrc66
Phc2
Schip1
Dach2
Crybg3
Arpp21
Smim11
Kcne2
Sobp
Gm9949
Adrb2
Itsn2
Arhgap26
Zfp811
Tmem53
Hs3st4
Il1rn
Vamp9
Thumpd2
Kpna2
Lrrn3
Dnm3
Golgb1
Eaf2
Angptl4
Bicd1
Msrb2
Vmn2r23
2700062C07Rik
Sstr2
Pcdh19
Rab27a
Pde10a
Man1a2
Arid3b
Ech1
Hnrnpl
Rnf125
2510009E07Rik
Kazn
Nxpe4
Zyg11b
Tbc1d5
Ksr1
Jam2
Zfp143
Mafb
Grik4
Rbm20
Ptprr
Hspa14
Cdnf
Nostrin
Apbb2
Trerf1
Evx2
Cyp19a1
Fcer1a
Rapgef6
Skida1
Mllt10
Cpb2
Ncam2
Bmpr1a
Rorb
Git2
Ankrd13a
Pik3r4
Mad2l1
Cd9
Otor
Runx1t1
Hlcs
Tnpo1
Fam71e2
Il31ra
Fzd10
Cyp4f17
Lrrtm2
Dip2c
Tnrc6b
Serpinb8
Pik3r1
Cntn1
Fam222a
Twist1
Dtna
Tcf12
Pou4f1
Fstl5
C2cd4a
Rag2
Iftap
Ttc39b
Ccdc182
Tbc1d9
Aktip
Celf2
Alox5ap
Txk
Entpd5
Bbof1
Olfr519
Bcap29
Ythdf3
Kank1
Hapln1
Katnal1
Zfc3h1
Thap2
Olfr960
Fzd8
Pde1a
Cyp27a1
Kansl1l
Vgll1
Pcgf5
Lman1
Cryzl2
Pabpc1
Tpbg
Zfp703
Plpp7
Gtf2ird2
Purb
Fgf10
St7
Elf2
Arid5b
Tcim
Clstn2
Fam171b
Srsf9
4930550C14Rik
Smc4
Ift80
Stra6l
Tshz3
Gli2
Sytl3
Plch1
Itgb8
Pik3c2g
Thbs1
Dcc
Elavl4
Fasn
Spink1
BC005537
Cyren
Fgfr3
Megf10
Mab21l2
Mtx2
Pdzd3
Nlrx1
Lect2
Olfr1034
Mmrn1
Slc17a6
Mdm2
Serpinb2
Gm14137
Gchfr
Dbx1
Invs
Erp44
Olfr1
Ubqln5
Ubqln3
Adh1
Clmn
Gm29797
Igsf9
Meis2
Adamtsl3
Med4
Slc44a3
Zfp9
Dmrt3
Tbx15
Sema6d
Reln
Nipsnap1
Spg21
2810006K23Rik
C6
Mn1
4930447A16Rik
Ciao3
Epdr1
Nxph1
Lyrm9
AB010352
Ccl7
Ccl2
Asic4
Skap1
Cavin4
Ldlrad3
Pitpnc1
Psmd12
Rhcg
Ccdc174
Uri1
Spag9
Fam241b
Map3k7cl
Sema4b
Zc2hc1a
Ctnna3
Arhgap15
Gdi2
Elovl5
Psme4
Tph2
Hpdl
Sncaip
Gm4791
Wnt1
Ddn
Zeb2
Fam126a
Rprml
Lyzl6
Smim8
Uts2b
Stk33
Xlr3b
Pkp2
Pdzk1ip1
Crb2
Neu2
Ngef
Hagh
Fahd1
Mettl2
Trim27
Stk32a
Spink7
Wipf1
Irx1
Dlk1
Nedd9
Pakap
Acot7
Kcna4
Pkhd1l1
Ddi2
Fam124b
Nebl
Megf9
Pax3
Rffl
Nepn
Gopc
Abr
Sfi1
Eif4enif1
Zfp608
Ppp1r9a
1700113H08Rik
Rnf165
Mrgbp
Lrrc4c
Meox1
Dct
Nnmt
Pccb
Bcas1
Dpyd
Phf10
Slc25a39
Nipbl
Rundc3a
Bbs2
Uaca
Prkab2
Ccbe1
Stk38l
Ing3
Mtnr1a
Olfr172
Tanc1
Ap3b1
Cited4
Lyz1
Wfdc6a
Eppin
Slc24a1
Ints14
Foxb1
Klhl1
Tlk1
Mtnr1b
Oxnad1
Dph3
Ascl1
Pde7b
Agtr1a
Dcp1b
Gja1
Skil
Extl3
Olfml2a
Nr6a1
Wt1
Zup1
Olfr599
Olfr598
Olfr597
Mmp28
Aldh1a3
Iqsec1
Ajuba
Id1
Lama5
Zfp933
Ccdc162
Lrch3
Lhfpl3
Cdh12
Cep85l
Bzw1
Pde9a
Adgrl3
Gpr37
Atxn7l3b
Muc4
Apob
Ubl3
Fezf2
Iglon5
Opcml
Uncx
Qsox2
Sc5d
Kcnj16
Zdhhc7
Nup107
Ncaph
Itpripl1
Stxbp5
Galr3
Srek1ip1
Cwc27
Fau
Gnb5
Micu1
Lrrc70
Unc93a
Kctd4
Gabrg1
Mrpl23
Atp10b
Bcl2l10
Trhde
Mysm1
Hepacam
Mpv17l
Pdxdc1
Cfl2
Nipal1
Cnga1
Gm28729
Tia1
Eya1
Smim18
Abl1
Rab28
Bicral
Sox5
Lpin2
Gm21663
Mroh5
Mib1
Qrfp
Bcor
Camsap2
Dab1
Nbdy
Kcnj3
Speer4a
Erich6b
Sytl2
Havcr2
Fis1
Glrp1
Pcnx
Ptf1a
Cxcr4
Tmigd1
Got2
Exoc2
Mycl
Zfp423
Rbm25
Slc26a7
Ireb2
Ndn
Drc7
Pla2g12b
Olfr1337
Rgcc
Ror2
Cobll1
Muc16
Paip1
Tcaf1
Clec7a
Olfr1385
Socs6
Stard13
Fam107a
Hdac9
Dctd
Tmem156
Kmt5a
Ttr
Nek7
Armc5
9130023H24Rik
Samd5
Tes
Meis1
Unc13c
Rb1
Psmd7
Prtg
Tbce
Trmt2b
Gpn3
Fam216a
Ccdc136
Rps10
Kbtbd12
Cblb
Gna12
Rcan2
Myo1b
Msl2
Sgms1
Cdh7
Tfap2a
Actn4
Madcam1
Odf3l2
Dcdc5
Zfp473
Vrk3
Arg1
C330018D20Rik
Pkd1
Plcxd1
Meis3
Polr2m
Usp4
Gpx1
Prrxl1
Rgs8
Tpst2
Srbd1
Nptx2
Dennd5a
H2bc1
H2ac1
Snca
Tubb6
Tet2
Sgpp1
Lin28b