ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9843669 | Lung cancer
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◢ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◣ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Nr4a1
Klf10
Acaa2
Sde2
Kctd11
Klf11
Arntl
Mtmr14
Etnk2
Cnot10
Eci2
Srebf1
Iba57
Osbpl9
Gabarapl2
Spata33
Chmp1a
Trib1
Cxcl10
Slc25a20
Per3
Ccnt1
Lsm14b
Socs2
Fosb
Denr
Abhd18
H2-L
H2-D1
Ifi204
Zfp623
Rela
1110002E22Rik
Rin1
Chrac1
Dclre1b
Ap4b1
Glt8d2
Hdac5
Otud1
Krtap1-5
Atf3
Pold3
Faf1
Spen
Ilf3
Rarg
Zbtb10
Mlycd
Setx
Echdc3
Nfkbia
Zbtb24
Gm3776
Kiz
Dgat1
Pip4p2
Rhebl1
Sbno1
Rab8a
Gsta2
1190007I07Rik
Tmem65
Sprr1a
Mrpl45
Herpud2
Mief1
Yif1b
Srebf2
Myl6b
Mfsd13a
Nme1
Gnas
6820408C15Rik
Tomt
Lamtor1
Emp1
Tob1
Ten1
Acox1
Slc25a35
Pum1
Tnfaip3
Ifnar1
Arhgap12
Mphosph9
2810006K23Rik
Map9
Kifc1
Rab3gap2
Zfp433
Gm32687
Ptpn2
Atg16l2
Ddx5
Cep95
Dguok
Fam71e1
Emc10
Ifrd1
Smpdl3b
Tigit
Nsun4
5031439G07Rik
Coq10b
Ankrd24
Nolc1
Oser1
Cars
Hyal1
Ubxn1
Fbxo31
Azin1
Zfp628
Coa3
Cntd1
Krtap2-4
Dnajb12
Etfa
Lmbr1l
Il23a
D2hgdh
Golga5
Avpi1
Hic2
Phlda1
Rras
Rab33b
Sfr1
Zfp653
Crtc2
Tns1
Rufy4
Ankrd1
Opa3
Rnf39
Chmp5
Bag1
Rapgef3
Mroh1
Usp2
Tmed1
Zfp119a
Polr2a
Rnf38
Ankrd40
Nudt9
Slc25a32
Dcaf13
Ube2n
Wdyhv1
Gtf2e2
Polr3h
Rbpj
Tmem147
Xpnpep3
St13
Thumpd3
Tomm20
Arrb2
Ptprn
4931428F04Rik
Xrcc1
Srd5a3
Pus7l
Irak4
Pinlyp
Frat2
Taf13
Tmem129
Tacc3
Rer1
Morn1
Csde1
Seh1l
Ftl1
Dusp6
Rnpc3
Scaf11
Bcl6
Tmie
Als2cl
Hexim2
Nudt1
Gpbp1
Limk1
Tmem125
Snrpc
Homer3
Ep400
Mcrs1
Zfp318
Oxsr1
Slc35a4
Apbb3
Plekhf2
Slc52a2
Fbxl6
Rom1
Eml3
Brpf1
Kat6a
Fam50b
Ddx59
Smarcd1
Ticam1
Orc4
Mbd5
Gtf2f1
Psmd8
Pts
Agtpbp1
Fam107b
B3gnt3
Mvd
Ociad1
Ccdc107
Slc25a45
Usp36
Eif4e
Sfxn2
Arl3
Tcf4
Hif1an
Pabpc1
Ccpg1os
Ccpg1
Naa35
Zfand5
Sgf29
Cxcl1
Abhd11
Nip7
Cog8
Ahnak
Ovol1
Ablim1
Rbx1
Fam53a
Ttc21a
Gorasp1
Thnsl1
Enkur
Cln3
Man1b1
Zer1
Rab5a
Hspbp1
Poldip3
Urgcp
Bcl2l11
Cald1
Apobr
Tnks2
Slc35a5
Atg3
Qars
Ubxn4
Josd1
Pkn2
Dstn
Pan2
Dhx34
Serinc3
Mndal
Erc1
Pgm2l1
Flot1
Lactb2
Zfp7
Osbpl8
Tmem198
Chpf
Pkib
Dyrk1b
Btg1
Tmub2
Ppard
Fasn
Derl1
Med21
Smurf2
Ube2b
Uck1
Fxr2
Eif4b
Gm14137
Timm13
Atp2b1
Fbxo3
4931422A03Rik
Mknk2
Cfl2
Agps
Cdk4
Ptp4a2
Cacul1
Tmco4
Eif3d
Metap1
Zfp655
Zfp740
Mrpl17
Bbs5
Pgap2
9130023H24Rik
Armc5
Nup98
Prcc
Pou2f1
B3gat3
Rps6ka5
Atxn7l2
Wrnip1
Mtmr4
Gpatch8
Snx15
Rabl2
Rad18
Trappc9
Fblim1
Ndufv1
Chchd5
Med11
Pop7
Strn
Fchsd1
Gpn3
Fam216a
Tjp2
Mesd
Aldoa
Anapc15
Tom1l2
Drc3
Rnft1
Camta1
Mrps28
Akr1c13
Lrtm2
Gm3448
Gm3417
9030025P20Rik
Csnk1g2
Ttc16
Ptrh1
Elf3
Rnf115
Polr3c
Zfp706
Prr13
Six5
Odaph
Ap5z1
Oplah
Atg10
Hspe1
Hspd1
Sgk2
Zfp511
Tubgcp2
Csgalnact2
Kbtbd7
Pcbp2
Adprhl2
Tmem229b
Dennd4b
Cct8
Zfp438
Sgk3
Tmem175
Gak
Zfp384
Ppp1r16a
Pam16
Cyth1
Dbnl
Ppp1ca
Tbc1d10c
G2e3
Ccdc28a
Paqr3
Pum3
Supt4a
Inpp5k
Zyx
Atg5
Zcwpw2
Azi2
Nup107
Mbtps1
Ahsa2
Hmga1b
Hmga1
Acadsb
Ikzf5
Ndel1
Atg14
1810037I17Rik
Gxylt1
Mad1l1
Gm4861
Ptpn14
Ist1
Tsku
Ptp4a1
Nr1d1
Ywhab
Noxo1
Gfer
Rad23b
Edem1
Ilrun
Atf2
Eloc
Unkl
Rrp1
Gga1
Dclk1
Tinf2
Sart1
Rmc1
Prpf38a
Orc1
Usp32
Shmt1
Spring1
Rnft2
Smu1
Rpl27
Uspl1
Dyrk1a
Echs1
Itgb1
Tmco6
Ankrd13c
Afg3l1
Tram2
Ccm2
Taf5
Prr12
Calr3
Hdlbp
Septin2
Zswim7
Ttc19
Spg7
Sertad2
Tomm40
Fam76a
Odc1
Nckap5l
Tfrc
Slc39a13
Ints1
Tank
Nup93
Tmem123
Lsm1
Bag4
Mpp4
H2-K1
Spg11
Esyt2
Nfat5
Ppp4c
Ncaph2
Lmf2
Ppp1cb
Dph5
Eif3a
Papss1
Pfkfb4
Mgat1
Topors
Smim27
Osbpl2
Rtn3
Ubfd1
Ears2
Otud7b
Coq8b
Rhbdl2
Dnal4
Nxf1
Atf7
Pip4k2c
Polg
Ippk
Cutc
Cox15
Vkorc1
Nelfb
Smg9
Cant1
Mib2
Pip5kl1
Mlf2
Myl12a
Cic
Capn10
Cuta
Gcnt2
Ufsp1
Naa40
Bcas3
Alad
Zfp619
Ankrd55
Utp3
Vps26c
Napepld
Zfp119b
Ndrg1
Ptpre
Tst
Mpst
Rbfox2
Mob2
Meaf6
Dsn1
Dhx8
Acaa1a
Myd88
Polr2e
Mcur1
Cfap20
Arih1
Ccnt2
Syf2
Cnot11
Atp1b3
Plekhn1
Rfx3
Trpm4
Usp48
Tgoln2
Tgoln1
Aip
Inpp5e
Usp53
Tmem134
Zfp341
Inpp4a
Map3k2
Cbx5
Foxa1
Creld2
Alg12
Sptan1
Klhl9
Cdkn2b
Kxd1
Vps18
Ddx41
Eif1
Tjap1
Zbed4
Troap
Sdcbp2
Pik3ca
Nudt8
Ifi211
Inpp5a
Kdm2a
Phf20
Klf9
Zfyve27
Zfp319
Usb1
Cd151
Lamp1
Gclm
Skp1
Bnip3l
Fbxw7
Lrp1
Tmc6
Hsp90aa1
Rfc4
Ahi1
Tmc8
Smchd1
Arfip1
Rnf170
Hook3
Acot2
Urm1
Dusp5
Rhot2
Get4
Txn2
Zfp276
Vps9d1
9130401M01Rik
Repin1
Tesk1
Rragc
Ino80
Pofut2
Ep300
Eif4a3
S100a10
Gar1
Fez2
Gfpt1
Mbd4
Ift122
Ralgapa1
Baiap2l1
Psmd3
Isy1
Sgta
Opa1
Mob4
Gtf2b
Atr
1700065D16Rik
Vamp3
Polg2
Atf1
Wwc2
Cldn23
Zfp719
Tpt1
Rpl3
H3f3b
Wdr27
1600012H06Rik
Clptm1l
Casc3
Pygo2
Ctdsp2
Tnk2
Aldh9a1
Prc1
Sco2
Cib2
Kctd20
Snn
Polr2f
1700088E04Rik
Lpar2
Kifc5b
Ctsd
Unc50
Coa5
Pcx
Narf
Psmc4
Gigyf2
Ubald2
Bbs2
Cox14
Siva1
Klhl15
Cnksr1
Hjurp
A730008H23Rik
Clcn4
Zcwpw1
Mepce
Mmaa
Birc6
Cdc34
Rhot1
Vti1b
Hspa12a
Eno4
Nppb
Serf2
Irf1
H4f16
Tmtc3
Cep290
Tatdn1
Ndufb9
Etnk1
Rpap3
Loxl4
Fbxl21
Zfp57
Nipal3
Aox1
Arih2
Gm3435
Lonp2
Styxl1
Mdh2
Mms19
Dhcr7
Nek11
Aste1
Ubtd1
Kpna3
Nadsyn1
Urb1
Tbc1d2
Wdr6
Fbxo10
Igsf9
Gm829
Ankrd22
Nsun6
Arl5b
Eef1a1
Dcaf10
Rps16
Ncapg2
Isg20
Cep55
Arrdc2
Camkk2
Pik3r2
Meig1
Nqo2
Cmtm6
Mtmr2
Rnf139
Atic
Rab3gap1
Castor1
Krtap4-16
Zbtb21
Arhgap23
Ubap2l
4933434E20Rik
Letm2
Fbxo30
Fbrsl1
Fancc
Plpp2
Tcte3
Ermard
Spag9
Hspa4
Ankrd11
Scrib
Raf1
Tnrc18
Ndufa12
Jmjd1c
Rnf5
Zfp687
Fam160b1
Qsox2
Tmem54
Idh1
Znrf1
Mycbp
Rpf1
Smim8
Yme1l1
Mastl
Ptpn1
Mlxip
Ndufab1
Pick1
Mex3b
Nmnat3
Fbp2
Polrmt
Snai3
Ap5s1
Uqcrq
Zswim6
Slc3a2
Erich1
Uvssa
Tmem183a
Opn3
Trmt6
Mcm8
Ubxn7
Guk1
Ints11
Cptp
Gm10639
Il22ra1
Maz
Kctd5
Gstm7
Vapa
Inf2
Mfsd5
Setd3
Ccnk
H3f3a
Zc3h8
Pmm1
Grina
Nr6a1
Pnrc1
Zfp408
Psmb2
Fbxo6
Coa7
Catsperg1
Pdcd6ip
Hmgn2
Ltn1
Cdkn2aip
Lmbr1
Ccdc43
Mvk
Mmab
Sipa1l3
Trim15
Frat1
Hps5
Gtf2h1
Dusp3
Fcho2
Lmbrd1
Parp16
Matr3
Mad2l1bp
Dnajb1
Ddx50
Adh5
Prxl2c
Nubp1
Zfp647
Trrap
Lrfn4
Cxcl14
Gprc5a
Snrpe
Pim1
Pcyt1a
Ddx42
Ccdc47
Hps6
Nfyc
Ube4b
Lin52
Aldh6a1
Tmf1
Ppp6r1
Fbxo27
Caprin2
Cbx7
Prr5
Krt80
Tspan4
Skil
Trmt112
Prdx5
Malt1
Entpd1
Usp19
Nup155
Bmf
Ascc1
Anapc16
Toe1
Mutyh
Polk
Cert1
Bckdha
Exosc5
Gdpgp1
Cib1
Cc2d1b
Rpusd4
Fam118b
Myo5a
Kif17
Wdfy2
Psmd12
Bcl2l13
Srxn1
Atf7ip
Churc1
H4c11
Acvr1b
Socs7
Prkcsh
Ccdc151
Elp5
Ctdnep1
Surf6
Kif23
Uckl1
Creb5
Cfap298
Larp4
Utp23
Clcf1
Cdc37l1
Patl1
Neu2
Ngef
Mfsd3
Lap3
Mrps7
Gga3
Safb2
Safb
Exosc10
Smim20
Prkca
Rcan1
Wdr18
Bag3
Txnl1
Zfp959
Rnf187
Rhbdd2
Slc12a4
Yipf5
Btaf1
Wtap
Tm2d2
Adam9
Zhx1
Sinhcaf
Lrp8
Eppk1
Atf6
4930558K02Rik
Pigc
Pa2g4
Twistnb
Rps8
Tarbp2
Ddhd2
Entpd7
Cdip1
R3hcc1l
Taf6l
Apol7a
Chst12
Usp46
Fermt1
Spty2d1
Fam53c
Lrrc51
Tef
Fam32a
Bsdc1
Slain2
Rel
Pcnx3
Map3k11
Mad2l1
Cpeb2
Ccni
2010109A12Rik
Ttc25
Czib
Zgrf1
Larp7
Rrm2b
Magi3
Unc45a
Spice1
Herc4
Tvp23b
Lyrm9
Mbd3
Rnf168
Chkb
Ago2
Kdm2b
Cenpu
Atg16l1
Thrap3
Zfand2b
Abtb1
Lcorl
Glul
Cenpp
Btbd19
Tctex1d4
Uqcrc1
Sun2
Puf60
Pskh1
Smdt1
Abi2
Snrpa
BC024978
Ptcd2
Mrps27
Tnfaip1
Ift20
Wdr45b
Raver1
Xrcc6
Desi1
Otub1
Sumo2
Inpp5f
Wdr47
Usp42
Cetn3
Prkch
Msh2
Btbd10