ChIP-Atlas: Target genes

Potential target genes for Hdac3

Query protein: Hdac3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX997776 | Liver
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Hdac3's Target genes

◢ Hdac3: Average

◢ SRX2599799: 3T3-L1

◢ SRX2599800: 3T3-L1

◢ SRX2599801: 3T3-L1

◢ SRX2599802: 3T3-L1

◢ SRX6871352: 3T3-L1

◢ SRX6871353: 3T3-L1

◢ SRX6871354: 3T3-L1

◢ SRX17156728: Bone Marrow Cells

◢ SRX17156729: Bone Marrow Cells

◢ SRX17156730: Bone Marrow Cells

◢ SRX17156731: Bone Marrow Cells

◢ SRX21934344: Brown adipocytes

◢ SRX14674610: Brown adipose tissue

◢ SRX14674620: Brown adipose tissue

◢ SRX14674621: Brown adipose tissue

◢ SRX14674622: Brown adipose tissue

◢ SRX14674623: Brown adipose tissue

◢ SRX14674624: Brown adipose tissue

◢ SRX14674625: Brown adipose tissue

◢ SRX14674626: Brown adipose tissue

◢ SRX1890321: Brown adipose tissue

◢ SRX1890322: Brown adipose tissue

◢ SRX3284078: Dorsal root ganglia

◢ SRX3284079: Dorsal root ganglia

◢ SRX3284080: Dorsal root ganglia

◢ SRX3284081: Dorsal root ganglia

◢ SRX3284082: Dorsal root ganglia

◢ SRX3284083: Dorsal root ganglia

◢ SRX3284084: Dorsal root ganglia

◢ SRX3284085: Dorsal root ganglia

◢ ERX2789780: ES cells

◢ ERX2789782: ES cells

◢ ERX2789783: ES cells

◢ ERX2789784: ES cells

◢ ERX2789785: ES cells

◢ ERX2789786: ES cells

◢ SRX4887836: ES cells

◢ SRX4887837: ES cells

◢ SRX4887838: ES cells

◢ SRX4887839: ES cells

◢ SRX1158925: Hippocampus

◢ SRX1158926: Hippocampus

◢ SRX1158927: Hippocampus

◢ SRX1722785: Hippocampus

◢ SRX1722787: Hippocampus

◢ SRX100289: Liver

◢ SRX100290: Liver

◢ SRX100291: Liver

◢ SRX100292: Liver

◢ SRX100293: Liver

◢ SRX2039594: Liver

◢ SRX2039595: Liver

◢ SRX2039596: Liver

◢ SRX2039597: Liver

◢ SRX2039598: Liver

◢ SRX2039599: Liver

◢ SRX206481: Liver

◢ SRX206483: Liver

◢ SRX2375597: Liver

◢ SRX2375598: Liver

◢ SRX2375599: Liver

◢ SRX2375603: Liver

◢ SRX2375604: Liver

◢ SRX2375609: Liver

◢ SRX2375610: Liver

◢ SRX5543268: Liver

◢ SRX5543269: Liver

◢ SRX5543270: Liver

◢ SRX5543271: Liver

◢ SRX5543272: Liver

◢ SRX5543273: Liver

◢ SRX679440: Liver

◢ SRX679441: Liver

◢ SRX679442: Liver

◢ SRX679443: Liver

◢ SRX997769: Liver

◢ SRX997770: Liver

◢ SRX997771: Liver

◢ SRX997772: Liver

◢ SRX997773: Liver

◢ SRX997774: Liver

◢ SRX997775: Liver

◣ SRX997776: Liver

◢ SRX9843666: Lung cancer

◢ SRX9843667: Lung cancer

◢ SRX9843668: Lung cancer

◢ SRX9843669: Lung cancer

◢ SRX9843285: Lung tumors

◢ SRX9843286: Lung tumors

◢ SRX9843287: Lung tumors

◢ SRX9843288: Lung tumors

◢ SRX105109: Macrophages

◢ SRX105110: Macrophages

◢ SRX22541700: Macrophages

◢ SRX22541701: Macrophages

◢ SRX22541702: Macrophages

◢ SRX22541703: Macrophages

◢ SRX5007209: Macrophages

◢ SRX5007210: Macrophages

◢ SRX897073: Macrophages

◢ SRX9702016: Macrophages

◢ SRX9702017: Macrophages

◢ SRX9702018: Macrophages

◢ SRX9702019: Macrophages

◢ SRX9702020: Macrophages

◢ SRX9702021: Macrophages

◢ SRX9702022: Macrophages

◢ SRX9702023: Macrophages

◢ SRX1655669: Pro-B cells

◢ SRX1655670: Pro-B cells

◢ SRX1655671: Pro-B cells

◢ SRX1655672: Pro-B cells

◢ SRX1668641: Quadriceps Muscle

◢ SRX1668642: Quadriceps Muscle

◢ SRX1668643: Quadriceps Muscle

◢ SRX13365787: RAW 264.7

◢ SRX13365791: RAW 264.7

◢ SRX13365795: RAW 264.7

◢ Hdac3: STRING

Amdhd2
Lamp1
Dpp7
Mfsd1
Washc2
Vps11
Hexa
Srsf2
Mfsd11
Gba
Clcn7
Mcoln1
Spns1
Dvl2
Neurl2
Ctsa
Ap5z1
Ube2b
Tpp1
Atxn3
Zbtb40
Cdk4
Commd9
Adh1
Sspn
Vps33a
Cnppd1
Retreg2
Cln3
Hps1
Dolk
Sumf1
Osgep
Apex1
G6pc3
Nagpa
Mthfr
Clcn6
Commd4
Atp6v1h
Atp6v0d1
Natd1
Zfp507
Kdm4c
Wdr81
Tmem267
Uvrag
Med28
Slc36a1
Tomt
Lamtor1
Ube2q1
Shpk
Ctns
Slc38a7
Scamp3
Ilf3
Rragc
Atp6v1c1
Gm20594
Rad9a
Bax
Mtdh
Dyrk1b
Rnasek
Vmn2r4
Eif2s1
Atp6v1d
Grn
Marchf8
Slc35a5
Atg3
Bloc1s1
Hnrnph2
Gla
Apc
Sgta
Trmo
Thrap3
Rpusd4
Fam118b
Dhx35
Crebrf
Rasgrp2
Vps26a
Vps50
Rps29
Nme1
Napa
Usf2
Selenop
H4c3
Fcna
Sae1
Gbp4
Polr2a
Ankrd12
Igf2r
Atp6v0b
Ap1g1
Npas4
Junb
Ctsd
P4ha1
Zfp655
Mrpl44
Gabarap
Commd8
Klf2
Herpud2
Epg5
Stmn1
H1f4
Cep162
Anapc5
Arl2
Uspl1
Eps15
Arid1a
Rbm34
Sde2
Celsr3
Dnajc13
Clcn4
Pga5
Orai2
Morc2a
Arl15
Dpy19l4
Socs2
Nfkbia
Ddit4
Mrpl30
Mitd1
Mrpl1
Sgk1
Camk2d
Cited2
Rab32
Gins4
Ets2
Calm2
Tob2
Bhlhe40
Jpt1
Dyrk1a
Irak2
Sdhaf3
Med4
H2-Q9
H2-Q7
Rmnd1
Armt1
Tcn2
Zfp292
Baiap2
Rptor
Mrpl39
Usp2
Urod
Hectd3
Klhl6
Usp3
Lamtor4
Kctd5
Nip7
Cog8
Ciao3
Abca1
Plk2
Galk2
Cops2
Cep120
Ccny
Smad7
Nceh1
Eif3g
Hexim1
Gramd1b
Chordc1
Wwox
Amotl2
Cds2
Ubxn1
Ccnyl1
Calcrl
Cstf2t
Rnf145
BC003965
Hnrnph1
Sgo1
Zfyve26
Rad51b
Stx16
Trappc8
Txnip
Arhgap12
Ube2j2
Ints10
H3f3b
Hjurp
A730008H23Rik
Mrpl34
Trp53
Wrap53
Kat6a
Csnk1a1
Dph1
Herc4
Wbp2
Ppp1r10
Mrps18b
Kbtbd7
Atg16l1
Ints6
Rcbtb1
Lin9
Dusp1
Camta1
Gbp6
Ndufa10
Snx1
Garre1
Kif20a
Brd8
Zfand5
H4c4
Adra2b
H4f16
Commd1
Tma16
Itpkb
Ing1
Chd9
Sh3glb1
Itgb1
Zfp36
Nup54
Plin2
Hnrnpa2b1
Cbx3
Ap5s1
Gbp9
Hmox1
Tmem203
Ndor1
Npc2
Isca2
Vta1
BC005537
Polg
Por
Atp5g2
E2f3
Arntl
Nudt9
Uba7
Zfp36l1
H4c9
Adprhl2
Ndufs3
Kbtbd4
Trappc9
Shmt1
Smad6
Top1mt
Polr3e
Ilf2
Cdk2
Ppdpf
Gm3448
Gm3417
9030025P20Rik
Trmu
Tubb4b
Tmx4
Psmd3
Tbl1xr1
Mtmr14
Cxxc1
Rpl5
Tnfaip3
Gtf2b
Comtd1
Ddx47
Cltc
Otud6b
Gpatch4
Kifc5b
Gpx1
Leo1
Mrps18c
Helq
Eef1a1
Paxip1
Pdp2
Gbp7
Dhx8
Alkbh7
Cdkn1a
Adcy10
Rhobtb1
Tmcc3
Tubb2a
Prkcsh
Ccdc151
Wrnip1
Snrpc
Dcaf1
Nr1d1
Dpp9
C3
Tmem171
Cluh
Rab5if
Utp3
Ech1
Cbs
Zfp719
Naa35
Apoa2
Rpl27
Fam71e1
Emc10
Gbp10
Ctla2b
Ten1
Acox1
Spen
Repin1
Tpt1
Oxsr1
Pnpla3
Aox1
Ahcyl1
Pla2g12a
Lpp
Cenpu
Spty2d1
Trib1
Rffl
Acaa1a
Cox20
Htra2
Aup1
Denr
Ddx20
Dusp6
Kifc1
Rnase10
Myo18a
Gnas
Aaas
Cst3
Ublcp1
Coq8a
Med23
Frat1
Xrcc1
Rabgef1
Slc6a12
Nr6a1
Ifnar1
Maz
Kxd1
Irgm2
Rara
Srebf1
4931406C07Rik
A630076J17Rik
Arsg
Idh1
Sh3gl1
Rbm25
Clp1
Ptgr2
Coq10b
Ccdc107
Ilrun
Tchhl1
Lgals3bp
Snrpa
BC024978
Myd88
Gatd1
Arih2
Lemd2
Tmem53
Dlat
Osgin1
Nuf2
Ist1
Polr2e
Eapp
Rdm1
Rbks
Babam2
Slx4ip
Mkks
Zbtb21
Zfp113
Clec2d
Tcf4
Rchy1
Acadm
Tiparp
Cd276
Hal
Dhx16
St6gal1
Cnot10
Stat3
Med6
Mlf2
Mgst1
Dnajb12
Rpl29
Ehd1
Tfrc
Pum3
Ptp4a2
Elmod2
Armh1
Psap
Wdfy2
Gpn3
Fam216a
Tomm40l
U2surp
Gclm
Tatdn2
Pomp
Arhgap23
Rarb
Ahctf1
Gtpbp4
Ndufs2
Dbi
3110009E18Rik
Eif4g1
Gmfb
Ccnt1
Nudt15
Gstm7
Phb2
Emg1
Ptpn12
Zfp36l2
Hpn
Acnat2
Cd300lf
Gns
Flot1
H2-Q8
H2-Q6
Dnttip2
Dnajc16
Slc39a13
Krr1
Exosc4
Ptk2
Rrn3
Prkag1
Fblim1
Dcp1a
Ap4e1
Hexim2
Ift46
Hif1an
Spink10
Fbxo38
Crem
Il1rn
H2-L
H2-D1
Fam210a
Mief1
Isy1
Slc39a14
Tspan4
Eif4ebp1
Znrf1
Pigm
Nlrp1b
Gapdh
Nudt1
Dohh
Zfp658
Akap1
Rnmt
Stk38
Prkab1
Uck1
Lims1
Snrpe
Yipf2
Timm29
Ubac2
Tfb2m
Cnst
Gm3435
Cenpa
Dido1
Rpl38
Nsun6
Fyco1
H2-K1
Thumpd3
Abhd8
Plekhb1
Vps18
Usp36
Ccl24
Zc3h6
Zbtb24
Psma6
Dglucy
Ccnl1
Tor1aip2
Tor1aip1
Necap2
Frg1
Rbm39
Ube2f
Mtmr4
Myl6b
Depp1
Tecpr2
Irf9
Cinp
Etfdh
4930579G24Rik
Rnasel
Echs1
Znrd1as
Znrd1
Zcchc7
Arl5b
Cacul1
Amz2
Picalm
Pafah2
Pold3
Iba57
Taco1
Slc25a45
Akr1b7
Adam17
Pdap1
Bud31
Ncbp3
Rbpj
Lonp2
Ankrd24
Ppp1r11
Setd5
Tcte3
Ermard
Acaa2
Gstm1
BC004004
Rwdd3
Furin
Adk
Atxn7l1
Ogt
Cdc42ep4
Acadl
Fbxl3
Rusc2
Tchp
Slmap
Zfp623
Spag9
Dmpk
Klhl24
Immt
Zc3h10
Arap1
Azin1
Ippk
Nr1h2
Rpl3
Fus
Pcbp2
Hsd3b7
Parp2
Tsku
Ddx41
Lsm4
H4c14
Spg11
Mcur1
Atrnl1
Sec24a
Zpr1
Vps13d
Man1b1
Baz1b
Phf5a
Aco2
Colgalt1
Cln8
Supt4a
Ankrd40
Ccm2
Ndufs7
Tmem101
Sirt6
Ptcd1
Cpsf4
Arrdc2
Dus1l
C9orf72
Arpin
Arf4
Prkrip1
Ints1
Gm20346
Tex14
Uroc1
Sass6
Hspa4
Tinf2
Pemt
Fam149b
Ecd
Ticam1
Yars
S100pbp
Dclre1b
Ap4b1
Polr2j
Lzts2
Esyt2
Timm10
Gadd45g
Mlycd
Rpl9
Lias
Mrpl52
Rad9b
Zfp384
Ppp6c
Ltbr
Kat7
Trp53rkb
Neil1
Tmem229b
Gstm4
Tesk1
Ndufb7
Mdc1
Sh3pxd2a
Rarg
D230025D16Rik
Irf2
Arpc2
Fam168a
Acadsb
Rer1
Morn1
Atat1
Caap1
Hp
Elp5
Ctdnep1
Vps33b
Ifit3b
Flt3l
Prmt5
Setx
Tmem140
Ikzf5
Rcan1
Eif1
Leprotl1
Zfp317
Tor4a
Tssc4
Hhex
Slc35a4
Apbb3
Gbp3
Smg7
Cops7a
Sphk2
Pdss1
Lrrc8a
Unc119
Abr
Ppip5k2
Gin1
Nr0b2
Akt2
Tmed2
Pip4p1
Cnpy3
Lsg1
Cdkn2aipnl
Crtc2
4932438A13Rik
Fubp3
Eif5
Creld2
Alg12
Zfpl1
Cdca5
Ptcd2
Mrps27
Ndufv1
Prkce
Surf6
Etv5
Bod1l
Rpia
Acsl1
Fam222a
Rnf185
Chchd5
Dennd6b
Cish
Vmp1
Cfap20
Acy1
Csrp3
Skil
Pgghg
Tada1
Gosr1
Slc25a51
Acbd5
Lair1
Akap7
Sft2d1
Dlc1
Oxnad1
Dph3
Mttp
Rps27l
Ubald1
Rapgef6
Lrrc61
Vnn3
Btg2
Pnrc1
Dennd4b
Atf6
Slc9a1
Plekhf2
Psmc6
Sbno2
Orc4
Mbd5
Zfp622
Ifi204
G6pc
Snx14
Nup153
Diaph1
Ldha
Naa60
Rxrg
Tie1
Mtf2
Mrpl11
Wdr36
Hacl1
Btd
Mideas
Ankrd11
Hnrnpf
Rab43
Srp19
Rpl21
Susd6
H2ac18
Zfand2b
Homer3
Gid8
Amacr
D10Wsu102e
Uap1
Shld1
Ddx24
Nvl
Setdb1
Oser1
Bms1
Elmo2
Cfh
Pnp
Tjp2
Taf1c
Nolc1
Rps12
Rrm1
Apof
Slc35b2
Gale
Tmem167b
Retsat
Elmod3
Tut1
Pgm1
Cdk11b
Rpl13a
Sult2a8
Akap10
Rmnd5a
H2ac19
Abhd11
Steap3
Wdfy1
Rab13
Nop14
Grk4
Ergic2
Pik3ca
Cyrib
Shoc2
Bbip1
Rint1
Plin3
Txnl4b
Dhx38
Sec31a
Cox7a2
Scrib
Slc9a8
Eif4a1
Fkbp1a
Ptpa
Crat
C1rl
Dnajc14
Calu
Epn1
Btg1
Slc29a1
C1qbp
Ndrg2
Prlr
Gtf2f1
Zfp148
Phlpp1
Dusp28
Cyp3a59
Opa1
Mdfic
Srr
Smg6
Slc17a5
Eef2
Slc45a4
Fam53c
Ints4
Mars1
Pim1
Sqor
Dguok
Ttpa
Cdk13
Rpl15
Nkiras1
Gdi2
Vapa
Sorbs3
Nelfa
Knl1
Cyth1
C1qc
Casp8ap2
Timm13
Arl6ip1
Pim3
Mob4
Cct8
Snrnp27
Zfp408
Retreg1
Prrg2
Nosip
Serf2
Cirbp
Snx17
Eif2b4
Megf8
Ushbp1
Babam1
Yif1b
Hibch
Klf10
Fam214a
Inpp5k
Cradd
Cbl
Aff1
Tlr4
Sh3tc1
Nat10
Faf1
Nfe2l2
Ap1m1
Slc25a32
Dcaf13
Rsad1
Kbtbd3
Lin54
Fitm2
Stat1
Fgd4
Dnajb9
Smg8
N4bp2
Trmt112
Prdx5
Slc33a1
Slc15a3
Copg1
Nfe2
Ino80c
Tymp
Etfrf1
Casc1
Srd5a3
Peli1
Cd93
1190007I07Rik
Cxcl10
Nol11
Slc25a20
Ccar2
Zhx3
Tmem198b
Lnx2
Rbm47
Vps28
Gosr2
Tent2
Igtp
Taf13
Car14
Abca6
Slc35a1
Rps7
Srrm2
Ino80
Atox1
Klhl20
Sdad1
Ifi47
Sart1
Zfp607b
Rpl18
Tnrc6b
Prpf6
Rpl23
Pradc1
Cct7
Echdc3
Hbp1
Xylb
Pex12
Gadd45a
Irgq
Soat2
Dnajc10
Slc26a11
Sgsh
Usp8
Rps27rt
Rps27
Mtmr6
Utp14b
Acsl3
Trappc3
Qtrt2
Hagh
Fahd1
Ccdc191
Vps35l
Psmd8
Nek4
Rps3a1
Camkk2
Rpl26
Acp2
Nabp1
Brpf1
Ptrh2
Pdk4
Chid1
S1pr2
Ndufa5
Atf3
Asb15
Tmem41b
Slc10a6
Rheb