ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX026264 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◣ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
NPY4R2
NPY4R
RBBP8NL
HOXB3
HOXB4
ABR
OR10V1
ZNF76
CYP2R1
CEBPG
PKDCC
COG1
PLRG1
FGB
C20orf204
ACVR1B
SPOCK2
HOXA3
RALB
TSPAN3
CREB3L1
ISX
HES1
GATA6
PCED1B
AMIGO2
KCNE3
ANKRD40CL
CD300LF
GRAMD1A
CDK5RAP3
PRR15L
C1orf100
ID1
STX16
MGAM
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
RDX
JOSD1
GPR84
WSB2
USH1C
OTOG
MYEOV
KRTAP3-2
KRTAP3-1
IGSF23
RARB
NEK2
LRRC69
HKDC1
PRSS41
TACR2
KRT8
CA4
RNPEP
ITLN2
NTF3
PPP1R14A
CD244
TOMM40L
APOA2
FCER1G
HK1
LRRC59
PDGFRB
CDX1
TNFAIP8
CHST7
CDK5RAP1
SMIM3
MAGEA11
NT5DC4
PMEPA1
PLAUR
GSTP1
TCF20
EML1
GNPAT
C1orf131
STARD10
RBM39
CHI3L1
PRICKLE1
ATXN1
DCAF6
MAPK10
EPRS1
HOXC6
HOXC5
ZBTB38
TBX4
SLC2A8
SLC6A7
RGS9BP
ANKRD27
RTN1
ARHGEF12
FKBP1A
INTS9
HMBOX1
PADI2
MORC1
ZMIZ1
SULT2B1
ABHD11
PI3
ZBTB45
SLC27A5
TMEM262
TMEM106C
TDRD7
SCT
IRF7
CDHR5
ZNF501
MALRD1
NAV2
GPR171
STX1A
PIGR
KRAS
CEACAM5
RHOH
SLC45A4
PIK3AP1
HOXC4
HOXC8
CERK
MRPL44
MEP1A
GUCY2C
SLCO2B1
CCDC90B
MICAL2
STAT3
ERV3-1-ZNF117
ERV3-1
ZNF117
KRTAP9-1
KRTAP4-2
KRTAP4-1
EPAS1
ATF3
PLEKHG3
PTCD1
CPSF4
WDR74
STX5
OR9Q2
REG3A
ADNP
FAM111A
THUMPD3
UBR2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CXCL2
RGS2
TOR1B
NUF2
FGG
TWF1
PRLR
PLEKHM3
ATP10B
GLYATL1
TUT1
MTA2
C1GALT1
ADAP1
CASC3
COL21A1
MAMDC2
RIN2
KCTD5
DNASE1
WFDC9
WFDC10A
RBM47
HAND1
BCAS1
GFOD2
ZNF226
WWC2
ABCB1
METTL15
KIF18A
MUC3A
TEFM
APOLD1
PSMB5
SYBU
HOXC10
HOXC11
ASB2
PNLDC1
ZNF169
LECT2
POMT2
GSTZ1
PTCHD1
PIK3C2A
TATDN3
NSL1
SFRP2
STAT1
ZSCAN9
ZNF512B
SAMD10
HERPUD1
DEPP1
PFKP
LOC102723996
ICOSLG
FBXO31
IL34
MAP1LC3B
NCOA5
ZGPAT
ARFRP1
DUSP18
MRPS16
DNAJC9
LCT
TMEM109
PRPF19
SPATA46
C1orf226
LRP2
PAK1
EPHB2
C3orf52
ALG10
RFLNA
ZNRF3
ITPK1
AKR1E2
CEACAM16
MRPS23
NFAT5
GPA33
SPOP
ARL14
EAPP
GRAMD2B
PRELID3B
SYCP2
PPP1R3D
FAM217B
HNF4A
HOXB9
TRIM2
MIDEAS
PLXNC1
STAT6
C2orf88
NR5A2
PMF1-BGLAP
PMF1
SLA
AJUBA
BHLHE40
NNMT
INTS4
MIA3
MOGS
MRPL53
REG4
SLC12A3
CNNM3
SMTN
NECTIN4
EPCAM
TMPRSS4
SMIM35
SLC35D2
SPRED2
MYRF
RHEBL1
KMT2D
OR6V1
YWHAB
COL23A1
GALNT11
TRMT61B
TFEC
ACOX2
GBA
TM9SF4
CFAP69
ELF3
WDR36
MRPL21
IGHMBP2
ZNF552
GINS1
ABHD12
TOB1
CALM2
CHPT1
PRSS33
CCT5
ATPSCKMT
SLC17A9
CEBPA
TFPT
PRPF31
AFF1
TESK2
MMACHC
COX5A
BCL2L1
SLC30A10
B3GNT6
CCNL1
ATE1
SLCO4A1
TMEM248
MT1F
MT1B
PDE4DIP
PAPSS1
MACC1
THAP1
ZNF3
COPS6
ALG10B
DCP1A
WDFY1
BANP
USP30
CTNNBL1
SLC20A1
MARK2
PEX3
ADAT2
ADARB1
BBS1
ZFYVE26
RAD51B
POTEI
CFC1B
EIF4G3
MAIP1
CTSK
ERICH5
MGAT4A
FCRLA
EDN3
NOS2
SCN1B
HPN
HIBADH
SMG7
HEPH
ANKDD1B
NPAS4
UQCC3
UBXN1
LBHD1
RAB3C
TMEM60
PHTF2
PPIAL4H
PPIAL4G
KPNB1
URGCP
URGCP-MRPS24
TMEM126B
DLG2
BCAS4
CDH18
SLC25A44
KCNIP2
RIC8B
LRRC4
H4C12
H4C11
H2BC15
H2AC15
DDX23
WWC1
TARBP2
NPFF
MAP3K12
TPX2
VSIR
CHST3
RGPD2
RGPD1
ZNF341
TATDN1
NDUFB9
UBB
PIGZ
SOX30
C5orf52
RBBP5
PRRT2
MAZ
PDE6A
FAM107B
GSDMB
SLC30A4
PGP
E4F1
ZNF513
SNX17
EIF2B4
S100A2
DNAAF2
IQSEC3
PTPRF
POTEJ
CFC1
ACOT1
ARL4D
NDUFS7
PITPNM1
HEXB
GCNT4
CAPN5
PCK1
HOXB5
COL12A1
GYS2
TMEM69
GPBP1L1
DAGLB
SDHAF3
ARHGAP32
MUS81
CFL1
KMT2E
VILL
ZNF248
CRLS1
MRPS14
NSMCE1
CRYBA4
EMP1
BAHCC1
MRPL3
SPAM1
CAPN2
CXCL5
SLC51B
PRPF18
SIPA1L2
IL1R1
RPL23A
RAB34
PROCA1
TLCD1
SAMD5
NEK8
EPS8
RPS7
TMEM141
CCDC183
VIPAS39
AHSA1
ACIN1
PRKAG2
VAV3
G3BP1
MTERF4
DCAF8L1
RNF114
ARHGEF18
NPIPB15
MRPS10
ZNF770
AP3B1
ANK3
SNTB1
POLR2J2
NCOA3
CFAP20
SEBOX
TMEM199
POLDIP2
DDI1
ALKBH3
LRIG3
SIRT4
CHMP3
COX16
PPIP5K2
KIF5B
HACD2
CDX2
URAD
NFKBIZ
ARHGDIB
LDHAL6A
EIF3F
BCL9
TSR3
NR1H3
GNPTG
ACP2
LGALS4
TOB2
DYNLT3
PGF
ATXN2L
AKNAD1
EPB41L1
CCND1
SLC12A2
MARCHF8
ARHGAP45
PDPR
KIF3B
DLX4
JMJD1C
COG3
CDCA3
GTF2H2
MBL2
TRIM48
RPS9
SREK1IP1
CWC27
ZNF207
PGAP3
ERBB2
C17orf75
ARHGAP27
SEMA7A
PLD3
C19orf47
SAR1B
KRT19
DENND1A
ZNF721
PIGG
KBTBD8
TUFT1
PLEKHG6
NODAL
KRT15
TNFSF15
RNF32
METTL25
CCDC59
CARD10
BMF
DTX4
TMEM38B
CDR2
TACO1
PPIAL4C
PPIAL4A
MCF2L
MANSC1
BORCS5
ANKRD33
ST6GALNAC6
ST6GALNAC4
HERPUD2
SLC18A1
MYBL2
FRA10AC1
TTBK2
IFRD1
MOB4
SCAND1
COL5A2
SLC33A1
TNFAIP1
IFT20
NUGGC
ELP3
MAST2
TBL1X
CARD16
C1orf116
ATP2B4
RNF7
AGT
TMEM123
CXXC5
CHKA
NOTCH2
MRTFA
NR1D1
DUX4
LMO7
UBAP2L
C1orf43
INTS6
RNASE6
RAB6D
PTH
GATM
DCUN1D2
CASP4
FUT2
FXYD2
CHST5
SH3D19
FABP1
FAM20A
TMC7
IRF2BP2
SLC3A2
SNX19
EPC2
KIAA2012
ZNF384
RANBP2
NECTIN1
IRAG1
SIN3A
PIGU
CPHXL
HPS6
ARMH3
CKAP5
INPP1
MTF2
TFRC
SH3RF2
NDUFC2-KCTD14
NDUFC2
FASTKD1
HOXC9
GULP1
BUD13
PKP4
CCDC148
GTF2IRD2
S100A10
AKAP9
POLD4
SLC25A16
SF3B2
GAL3ST3
MTRNR2L1
KBTBD7
SQSTM1
KRR1
H4C4
H3C4
H2BC6
RAPGEFL1
GSTO1
ZCCHC8
PITX2
ADGRE5
GPATCH1
ZFP36L1
TSPAN32
C11orf21
SC5D
ART1
ZHX3
DOCK6
USPL1
HMGB1
FOCAD
PAX8
MYL6B
MYL6
SMUG1
RPL37
MMP15
CARD6
LUC7L3
SRGAP1
ZSCAN32
ZNF174
ARIH1
C11orf65
TTC13
ARV1
DPY19L4
SMIM30
RALGAPB
RNF145
EHBP1
WDR89
TULP4
CLIC5
ADGRG1
ABCC3
STK31
SLC25A36
CTDP1
PRRC2C
MRPS33
NXPH2
TEAD4
KDM5B
DGCR6L
CPNE6
ABT1
ZNRF1
WDR59
MBTPS2
SCNN1A
LTBR
PBLD
HNRNPH3
ZFP36L2
ZFHX3
OGDHL
NCBP3
FABP7
CDC14A
YAP1
ANXA4
ZFP62
ZSWIM1
SPIB
SPATA25
NEURL2
MRPL2
KLC4
CUL7
CTSA
RNF44
CDHR2
TMEM242
PDE6D
COPS7B
DAGLA
SLC30A6
WDR97
TAS2R19
SNRPC
MAF1
FBXO28
CYC1
LIMA1
ZNF503
SUPT7L
SLC4A1AP
SV2A
DSTYK
BOLA1
TSPAN8
LAMB3
SIX1
MTG1
TSSC4
ZNF746
GTPBP4
VTA1
NMBR
AQP11
BLOC1S6
AGR2
SLC7A5
ARHGEF28
SDC4
TYMSOS
TYMS
SLC29A4
FANCD2
SP2
MED23
ACHE
SURF6
IGFL4
CALML4
OGT
ZNF510
ZNF749
PGLYRP1
FAM227B
DTWD1
TRPC3
CLDN12
GTF3C3
C2orf66
SYMPK
FOXA3
CEP126
ANGPTL5
FURIN
CPLX2
INTS5
GANAB
UGT8
CXCL17
PRORP
PPP2R3C
TEX46
SMARCD1
LIPE
KDM1A
ASIC1
AAR2
ATP9A
OTUD6B
GSK3A
IDH1
SLC46A1
TMEM167B
PLIN2
PDZK1
NOL4L
TRIB3
TJP3
PTDSS2
ITIH2
ARFGAP1
ANO9
UBE2V2
EXD2
CLPB
RCE1
PTEN
PPP1R35
KLLN
DIDO1
ANKRD13D
RAB5B
PMEL
CDK2
NEK10
SF3B5
PRDM11
HTR3B
LGALS3
HEPACAM2
CTSB
LASP1
RPS5
VPS50
PPIL1
C6orf89
OPA1
DENND4A
POFUT1
PLAGL2
ADAMTS9
DESI2
PTP4A1
CDC42BPA
STT3A
CHCHD3
MRPL30
MITD1
ARL8B
HSD17B4
SELENON
FAM131B
INTS12
GSTCD
PDSS2
EPHA10
TMEM107
ATP8B1
NUDC
NR0B2
SPRING1
RNFT2
SPINT1
LTN1
LYPD6B
PRKG1
VIL1
SERPIND1
SCAF1
RRAS
TTLL6
NMNAT1
LZIC
CYCS
NAA20
MROH7
POLR2J3
ABCB9
OGFOD2
ARL6IP4
SLC35E3
CREBL2
CDKN1B
AGPAT2
PHYKPL
MATR3
TYRO3
HOOK2
HNF4G
ETV4
WDPCP
MDH1
TMEM97
NAGK
GALNT5
RBM25
PDXK
A2M
ZNF337
CXCL9
ART3
GCG
ZC3H15
FNIP2
CCDC88A
NOSTRIN
RTTN
ZNF577
FGF1
ZNF789
ATP5MF-PTCD1
ATP5MF
RAB5IF
OVOL1
EIF1AD
CST6
BANF1
AP5B1
ZNF91
ZW10
CLDN25
KANSL3
FER1L5
PLA2G1B
HAVCR1
CUBN
OR10AD1
DCAF8L2
KIFBP
PSENEN
LIN37
IGFLR1
SELENOP
SEMA4G
PROSER3
LHPP
HSPB6
DMAP1
FCMR
SEC23A
CLTC
FGA
EFNA1
CRBN
SLC50A1
ZNF30
LGMN
DEXI
CLEC16A
AMACR
PLEKHG1
AMOTL2
SNX5
MGME1
TIMM10B
DNHD1
ORMDL3
PDP2
KLB
GTF2H2C_2
GTF2H2C
TIMM23B
TAMM41
RESF1
PARG
KEL
FAM98B
SLC25A13
TMEM230
PCNA
TBC1D19
RPS3A
MKRN2OS
MKRN2
TOP3B
CTU1
PSAP
STMN3
RTEL1
PUS7L
IRAK4
TRIM15
TRIM10
OPTN
CCDC3
OIP5
NUSAP1
TIMP3
CMTR2
YAE1
NRCAM
PROCR
MRPL38