ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9964512 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◣ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
HOXB3
HOXB4
FRG2C
GATA6
DUX4
HOXC6
HOXC5
DPP4
CDK5RAP3
PRR15L
MALRD1
ART1
HOXA3
HOXA4
HOXA6
HOXA5
PHYHIPL
RHBDD3
EWSR1
ZFP64
COL5A2
RDX
HOXB5
FOLH1B
LOC102724770
DGCR6
GFOD2
ACVR1B
LRRC4
C1orf100
TSPAN3
AGMO
RHOH
USH1C
OTOG
SI
DUT
FGG
COBLL1
COG1
WNT5A
MUC3A
SF3B4
MTMR11
LECT2
UBR2
ABCB1
MEP1A
OR9Q2
RTN4
FKBP1A
C20orf204
ZNF76
FRG2
IL37
NAA20
PDE4DIP
IGSF23
CEBPG
PRICKLE1
PHRF1
ST3GAL2
FCSK
SMIM10L1
PRH1-TAS2R14
PRH1
TOR1B
FABP7
RARB
LUC7L3
AADACL3
PDZRN3
MPP6
MEIS1
NFKBIZ
GNPAT
C1orf131
RGMB
NHS
WBP4
ELF1
FAM20A
DEPDC7
ALDH3A2
PITX3
GBF1
PYROXD1
PNLDC1
LGALS3
MTCL1
WWC2
PKP2
TFEC
POTEJ
CFC1
GPR160
ARHGAP28
ABR
HOXD4
TGIF1
SLC12A2
ZNF169
ATXN1
SPOCK2
PLEKHM3
CAST
LNX1
CDH17
COX5A
B3GNT5
LAMA3
GYS2
FAM72C
PLRG1
FGB
FAM72A
HPCAL1
HAND1
APELA
CA4
GATM
SALL4
RIN2
PRKG2
SLC30A10
RNF157
NTF3
CYTH3
HHEX
HOXB9
HOXB8
HOXB7
IL34
CYP2R1
PI3
ZNF143
KREMEN1
SULT2B1
CACNA1D
PTH
CXCL9
ART3
HOXC4
HOXC8
ZNRF3
TMEM38B
IKZF2
SLC2A9
ARHGEF16
ZBTB38
SLC7A6
TM7SF3
MED21
TRIM2
PKDCC
SYBU
RAMP1
PPM1L
SEH1L
SLC38A1
TLE3
AFAP1
MGAT4A
AMACR
FAM72D
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
HEXIM2
HEXIM1
COL23A1
ARF6
ANO6
MS4A18
CEBPA
LYSMD3
TMED9
TMEM174
JUP
ACTRT3
MYNN
AKAP7
B3GNT6
NPY4R2
NPY4R
SLC25A44
THUMPD3
SMAD5
PDE4D
RHOBTB1
GPR84
SMCHD1
BRI3
ALS2
HNRNPH2
GLA
PIK3R1
HK1
GSTP1
ARL14
LRRC66
RMDN2
OAT
CTSO
ERBIN
NAPEPLD
CDON
HSPE1-MOB4
HSPE1
HSPD1
CEACAM5
LOC388282
KIFC3
GGT1
PRLR
HNMT
TBCK
AIMP1
SLC26A2
ACTR3
ERVMER34-1
PDGFRB
CDX1
KCNIP2
ZFX
SPC25
G6PC2
ANKRD30BL
RHOBTB2
ZBED8
GLYATL1
ARL4D
UGT8
SOAT1
OLFML2A
NR6A1
MUC20
UGT1A6
MBNL1
ST7
TRAM1
CEACAM16
MICAL3
KRTAP3-2
KRTAP3-1
STK32C
LRRC27
GCG
C1GALT1
CNGA1
NIPAL1
TMEM170A
PLEKHG1
RBM38
CHI3L1
SLCO2B1
TMEM141
CCDC183
VIL1
ARHGAP8
ARHGAP32
TMEM45B
RNASE6
GOLIM4
SELENON
QSER1
SULT1C4
ANXA4
REEP1
CAPN2
FKBP4
SLMAP
IL36RN
IL36B
C17orf78
ADD3
SLC41A3
KRT8
SMIM3
PHYKPL
ATP9A
EHBP1
MGAT1
PHLDB2
NEK2
CCDC34
UGT1A1
C8orf34
MARCHF6
RBBP8NL
ZNF608
ZC3H15
JOSD1
ISX
TMCC1
STAM2
SPATA46
C1orf226
DDHD2
HSD17B7
COL21A1
PTP4A1
XYLT1
XXYLT1
TAS2R46
CCDC198
MTX2
LRRC69
EPAS1
STOM
UGT2B7
MORC1
EIF2S3B
UGCG
AIG1
PCED1B
AMIGO2
HOXC10
HOXC9
BTG1
PPP2R1B
HEPACAM2
CYP2W1
COX19
PIGZ
GRAMD1A
MATR3
CCDC200
SLC1A1
UQCRB
CD244
KRAS
KIAA2012
MED13L
SMARCAD1
NCOA1
SLC2A8
DESI2
CD300LF
MTUS1
ANK2
KMT2E
NECTIN1
SCGB1A1
AQP11
FNTA
MYL4
PDE6A
RAB11FIP2
PSMA1
PDE3B
MEOX2
MPPE1
TAOK3
INHBE
GLI1
AP1M1
FABP1
MAML2
KSR1
CCDC81
GINS1
ABHD12
RNF32
DRC7
TP53BP1
ANKRD45
PRSS41
YWHAZ
PRSS33
DCUN1D2
TMEM200A
SAMD3
ALDOB
NAV2
TRPC3
MAPK10
TMIGD1
TRMT61A
CKB
FLRT3
MGLL
TSPAN12
ZCWPW2
AZI2
A2M
NDUFB4
OR10V1
REG4
CLRN3
SHOX2
RSRC1
BTNL2
MGA
RNF145
NXPE1
POTEH
PHLPP2
USP17L21
USP17L20
USP17L12
FAM91A1
USP17L18
USP17L13
USP17L11
USP17L10
PDXDC1
RALB
LRRC19
PIGR
NBPF1
POMT2
PKIB
GSTZ1
CSTF2T
CITED2
ARHGDIA
INPP5F
NEK7
PARD6B
MICU1
LYRM7
HINT1
HES1
CHST5
ARHGAP10
EPB41L3
GSDMB
GRAMD2B
USP17L22
ORMDL3
SLC51B
YWHAE
AFP
MYRFL
SPINK1
TLCD5
TRIM8
ITLN2
PRDX6
MAPKAPK2
JMY
GAS2
TTLL6
YBX1
TBC1D30
MICAL2
ARID5B
TMEM267
KLHL8
INSIG2
PDZK1
CFHR5
H3C7
H2BC9
B3GNTL1
MRPS10
DLX4
AMBN
NR5A2
SLC22A2
HSPH1
PAX9
EFHC2
SUSD6
IL17REL
PISD
SRGAP1
CARD17
MALL
ATP13A4
TSPAN8
KRCC1
LETM1
HMGCS2
DHX15
USP44
ENTPD7
CLDN16
C2orf72
C3orf52
FAM234B
MKKS
TM9SF2
PPIAL4H
PPIAL4G
SH3BGRL2
ROS1
FCMR
TOE1
MUTYH
OR10AD1
HPDL
STARD13
IFIT1B
ACSF2
SHLD2
GLUD1
PTGR1
OR13G1
ZNRF1
WDR59
CSRNP3
CMKLR1
GALNT11
FNIP2
ABL1
PSMC6
ERO1A
COG3
PLA2G12A
RASA2
GDI2
KIAA1217
SLC4A8
DIAPH3
SFRP2
ANKDD1B
CES5A
IGLL5
MAVS
DKK1
ARL1
CRYGC
CRYGD
CCT5
ATPSCKMT
PPM1H
CFAP44
EPRS1
FAR1
KLRK1
HNF4G
USP17L17
USP17L15
LIPH
TIMP3
FJX1
EDAR
HEXB
SLC10A7
EPHX2
CHRNA2
EHF
PPP2CB
SMIM14
CCKAR
AKAP9
TIAM2
ZNF311
HERPUD1
AFF1
REV1
NFX1
SLC20A1
KRT19
NCOA7
HOXD1
ANKRD36C
FOXD4L4
DCAF6
ARHGEF38
MPC2
KDM8
FANK1
DHX32
MAMDC2
MTRNR2L1
WDR74
STX5
PLAUR
CREB3L1
TRIM48
EEF1A1
CERK
EAPP
MGAM
SOX2
GUCY2C
POU5F1B
INTS9
HMBOX1
PLS1
KLF4
WSB2
TMEM107
EPHB2
TNFAIP8
LOC102723996
ICOSLG
HKDC1
TFAP2A
ZBTB45
MYEOV
KCNE3
PMEPA1
ATP8B1
QSOX1
APOLD1
TOMM40L
APOA2
FCAMR
TATDN1
NDUFB9
ATE1
TACR2
PLEKHG3
ANKRD40CL
FBXO31
FHL2
SLC27A5
DNAJC25-GNG10
DNAJC25
SLC6A7
TMEM262
DUSP18
SPAM1
IZUMO3
C2orf88
STIL
AP2S1
CDC14A
PAPSS1
ZNF91
TTC13
ARV1
DCAF8L1
PTCHD1
TBPL1
SLC25A27
CYP39A1
TMEM106C
CHST7
RGS2
EML1
NOS2
ARHGAP35
LCT
GPA33
RAB6D
POU5F1
TDRD7
EIF4G3
MAP3K14
TNFSF15
RBM39
CABLES1
NSMCE1
PFKP
SPRED2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TSNAXIP1
RANBP10
SMG7
MPV17L2
GSG1
DEPP1
FLNB
GCNT4
FGFBP1
DENND1B
LAMB3
FUT4
AKNAD1
WDR77
ATP5PB
ABHD11
LAMTOR4
TMEM60
PHTF2
HEPH
RTN1
MLEC
EPCAM
RBM47
TES
WWC1
STX16
SIPA1L2
RNPEP
DCP1A
ALG10
CLDN12
LRIG3
ITPK1
LRRC18
GALNT5
WASHC1
SIRT4
SLC45A4
PRELID3B
MAIP1
STARD10
RNF114
ANK3
STAT3
FCER1G
TDRD1
CCDC186
CDR2
RPUSD4
FAM118B
UGT2B10
KIF5C
SH3D19
MYOF
CHMP5
BAG1
LRP2
DNASE1
YAP1
ATP10B
TGFBI
H3C15
H3C14
H2AC19
H2AC18
SERPIND1
MUC12
ARHGEF12
IGFL4
ID1
GSN
RBM25
MYRF
MACC1
IQGAP2
WHRN
VSX1
NRARP
ZZEF1
CYB5D2
ARHGAP17
PES1
INTS4
DHRS3
EPB41L1
ZNF3
COPS6
CELA3A
ZNF563
TBL1X
HACD2
DOCK10
HSD17B4
FAM53B
CCDC90B
ZNF226
DUS4L-BCAP29
DUS4L
COG5
CASP4
TFPT
PRPF31
GGH
SURF4
GEM
LGALS4
KIF16B
DEK
FCER1A
PTPRF
TUT1
MTA2
ETV5
SGK3
ABLIM1
SNX30
TMEM242
RNF43
PTCD1
CPSF4
SLC17A4
SEMA3C
TMEM69
HSD17B12
GPBP1L1
PPP1R12A
ZMIZ1
PMF1-BGLAP
PMF1
TBX4
ZSWIM7
TTC19
ADGRE5
INTS8
CPS1
SAR1B
MGAM2
H4C12
H4C11
TMEM87B
SCT
IRF7
CDHR5
ATF3
PGP
E4F1
ROCK2
MARCHF8
S100A10
RGS9BP
ANKRD27
MRPS16
IFRD1
MIA3
WDR89
IFI30
H2BC15
H2AC15
CHMP3
MAP1LC3B
ACOX2
RNF183
PPP1R14A
FAM177A1
RTN3
ATL3
SEC23A
CXCL5
SLC33A1
ERLIN2
CLDN4
USP7
ST6GALNAC6
ST6GALNAC4
NEU1
METTL25
CCDC59
SNTB1
INAVA
TOB1
MYO18B
STK11
TAF12
RAB5B
PMEL
NXPE2
CXCL2
CDK2
TMPRSS4
SMIM35
NUF2
TM4SF4
RAP1GAP2
P2RY1
NNAT
BLCAP
MRPS23
TATDN3
NSL1
HESX1
FAM72B
APPL1
SFR1
TEX19
FAM107B
TXNRD1
CDX2
STAT1
RAB14
MROH7
KRTAP9-1
RBCK1
CMPK1
MLLT3
PIK3C2A
HOXC11
CGGBP1
ARHGAP45
LMO7
CDK5RAP1
ADNP
PPARG
MCTS1
MAGEA11
ELF3
SLC35A3
FOXN3
CASP5
MBNL2
COX20
CRYBA4
SLC25A13
ADGRF4
KRTAP4-2
KRTAP4-1
KRT39
WFDC9
WFDC10A
PERCC1
EPS8
MIDEAS
LRRC59
SCYL3
WDR36
TXNDC8
PAK1
IQGAP1
C3orf85
TMEM54
SOX30
REG1B
PTPRN2
CTSK
C5orf52
RGPD2
RGPD1
RARRES1
PPIL3
NIF3L1
FAM131B
CDK11B
CDK11A
UBB
ZHX3
JAGN1
CIDEC
VPS13A
VAV3
CREB3L3
NWD1
RIC8B
HNF4A
SCGB1D1
GBA
PTPN6
NFAT5
C12orf57
RHEBL1
KMT2D
FAM111A
ZNF248
UTP3
TESK2
MMACHC
BCL2L1
PSMD3
TMEM126B
SRPK2
RBM15
DLG2
KLHL30
CEP126
ANGPTL5
LIMA1
CAPN5
PTK2B
THAP9
SEC31A
MRPL44
ETFB
RABEPK
MTRNR2L8
INPP1
AKR1C3
METTL15
KIF18A
AHCYL2
CASC3
IL33
RGPD6
ENGASE
UTS2R
BIN1
FURIN
HSP90B1
ARHGEF10L
RPSAP58
PRSS3
DLAT
NUDC
NR0B2
SLA
ELAPOR2
SCAF11
RNF31
RNF186
PSME2
EMC9
NUDCD1
TPD52
PRKCZ
DNAJC9
PRKAB2
CHD1L
ZMPSTE24
ACAN
PLAAT2
JMJD1C
RASA1