ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9964513 | Caco-2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◣ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◢ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

KMT2A
SNX12
ZFP64
HOXB3
HOXB4
HOXC6
HOXC5
GATA6
MALRD1
DUX4
FRG2C
CDK5RAP3
PRR15L
LOC102724770
DGCR6
C20orf204
ZNF76
ABCB1
C1orf100
GFOD2
COL5A2
ART1
LRRC4
TOR1B
DPP4
HOXB5
ACVR1B
SF3B4
MTMR11
RHBDD3
EWSR1
HSPE1-MOB4
HSPE1
HSPD1
ZNF143
RDX
RIN2
OR9Q2
DUT
TSPAN3
PHRF1
FAM20A
ABR
FOLH1B
PDZRN3
MUC3A
FABP7
COG1
FGG
FKBP1A
USH1C
OTOG
HOXA3
HOXA4
HOXA6
HOXA5
LGALS3
GYS2
PKDCC
LECT2
HOXB9
HOXB8
HOXB7
POTEJ
CFC1
ARL14
MEP1A
COX5A
SI
CA4
IGSF23
PTH
NAA20
PDE4DIP
NEK2
PITX3
GBF1
NPY4R2
NPY4R
PHYHIPL
FRG2
AGMO
RARB
PRICKLE1
SPOCK2
NTF3
GSTP1
PI3
GNPAT
C1orf131
GUCY2C
SEH1L
ISX
YWHAZ
RHOH
GPR84
CYP2R1
WBP4
ELF1
TLE3
COL21A1
VIL1
ST3GAL2
FCSK
WNT5A
UBR2
RBBP8NL
DEPDC7
BRI3
THUMPD3
MTCL1
SELENON
ERVMER34-1
RGMB
HAND1
MGAT1
ARL4D
KIAA2012
SULT2B1
JOSD1
MORC1
CEBPG
IL37
GPR160
LUC7L3
PRKG2
FKBP4
PHYKPL
NHS
GATM
DNAJC25-GNG10
DNAJC25
MYEOV
PKP2
SLCO2B1
CDON
C17orf78
CEBPA
ATXN1
CD300LF
MGAT4A
LRRC69
MEIS1
ARHGAP8
HEXB
GCNT4
KCNIP2
SLC20A1
COBLL1
FAR1
PNLDC1
TMEM45B
NAV2
CAPN2
HK1
TULP4
CCDC34
CHI3L1
B3GNT6
HOXD4
COL23A1
TGIF1
SLC30A10
ZNF169
CDH17
PIK3R1
EML1
TRIM2
DHRS3
NFKBIZ
CACNA1D
DHX35
NECTIN1
ALDH3A2
TMIGD1
AIG1
SMIM10L1
PRH1-TAS2R14
PRH1
CRYL1
SLC25A44
CCDC200
PCED1B
AMIGO2
CHST5
DESI2
GSG1
ANXA4
PRLR
SFRP2
FAM53B
MGLL
GRAMD2B
HHEX
ARHGAP32
INHBE
GLI1
HOXC4
PDGFRB
CDX1
TTC23L
HOXC8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SLC7A6
ANO6
CA1
TMED9
LRRC18
PERCC1
RALB
IL36RN
IL36B
PLRG1
FGB
PLEKHM3
PAPSS1
TMEM38B
CD244
POTEI
CFC1B
COL12A1
DUSP18
IL34
SLC41A3
MTRNR2L1
AP1M1
DRC7
GLYATL1
RNPEP
CXCL9
ART3
SLC2A8
ZNF285
CERK
LCT
PDE6A
STK32C
LRRC27
SPATA46
C1orf226
PYROXD1
AADACL3
KMT2E
HNRNPH2
GLA
TATDN1
NDUFB9
SMAD5
TMEM106C
NSMCE1
DLX4
GOLIM4
ZBTB38
MAPK10
TAS2R46
HNF4G
C2orf88
SERPIND1
LMO7
YWHAE
CAST
IKZF2
KREMEN1
ZHX3
SVIL
TMEM141
CCDC183
TIAM2
PTP4A1
RNF32
EPCAM
MAIP1
TIMP3
TRPC3
MS4A18
SLC1A1
RBM38
CYTH3
WWC2
PRSS41
PRSS33
STOM
PTTG2
KRTAP3-2
KRTAP3-1
OLFML2A
NR6A1
KLHL8
RNF43
NSUN4
MTUS1
POMT2
GSTZ1
USP17L21
USP17L20
USP17L12
USP17L22
REG4
RNASE6
FBXO31
LRRC66
OR10AD1
TAL2
TSPAN12
EDAR
H3C7
H2BC9
TBX4
MS4A4A
PTCHD1
ADD3
MGAT5
CREB3L1
ANKDD1B
CLDN1
PLAUR
ATE1
CYP2W1
COX19
MED13L
MATR3
TMC7
FAM161B
COQ6
GRAMD1A
TDRD1
CCDC186
SOWAHC
SEPTIN10
IRAK2
ABL1
WDFY1
OR6V1
NUDT16
LDHD
HKDC1
UGT1A1
DEK
SYBU
BNIP5
EMP1
HSD17B7
GALNT11
RTN1
FNTA
SULT1A1
SULT1A2
USP17L18
USP17L13
USP17L11
USP17L10
ADGRA1
PLEKHG3
NOS2
AKAP7
HERPUD1
KDM8
SOX9
AMACR
EHBP1
HNMT
ATP9A
PPM1L
LRRC19
GINS1
ABHD12
PISD
RGS19
OPRL1
LKAAEAR1
ZNRF3
CEACAM5
NAGLU
NAPEPLD
CTSO
RELL2
HDAC3
FCHSD1
HOXC9
SLC26A2
GAS2
LETM1
VDR
AFP
TNFSF15
MPP6
KRT8
EIF4G3
IL1R1
C3orf52
GCG
HEPH
WWC3
SIX1
HMOX1
LOC388282
KIFC3
CPS1
RMDN2
EPHB2
TMEM170A
FCMR
TRMT61A
CKB
SOX5
SLC22A2
TFEC
SPINK1
MLLT3
ADCY5
SLC12A2
RNF145
ZFAND6
EPO
HES1
LAMA3
PIGZ
C8orf34
CHD9
PLEKHG1
EPHX2
CHRNA2
MICAL2
ACTR3
SLA
FGA
PRTG
ZP2
CNGA1
NIPAL1
ALS2
BTG1
NCOA1
S100A10
MED14
EPRS1
TCP11L1
RNF7
APELA
RNF157
USP17L17
USP17L15
C1GALT1
ARHGAP10
TMEM126B
DLG2
TMEM126A
CAPRIN2
PDZK1
FAM234B
ACSL5
EVPL
ZNFX1
SLC51B
PRIM1
HSD17B6
LRP2
PLS1
STAM2
UGCG
TINAG
DLC1
SPAM1
CLRN3
RAPGEF1
TMEM60
PHTF2
MYRF
GGT1
GPATCH1
RIN3
PRDX6
FOXN3
SNTB1
TSKU
SLC6A11
HOXC10
PDXDC1
SPATA13
CERKL
RFWD3
SORBS1
PTCD1
CPSF4
KCTD18
PFKP
INTS8
FAM107B
ZNRF1
WDR59
PPIAL4H
PPIAL4G
APPL2
EIF5AL1
FAM72C
FAM72D
MBNL1
FAM72A
RAMP1
NR5A2
SLC2A9
SMPD1
APBB1
TMEM200A
SAMD3
CACNG1
ARF6
CCDC65
TATDN3
NSL1
TDP2
ACOT13
C16orf54
COG3
A2M
PYGL
BIN1
CCNL1
TMED10
TEX19
UTS2R
AKAP9
TANK
DNASE1
HEPACAM2
JMY
TMEM52B
OLR1
C2orf72
GAGE2B
TNFAIP8
EGLN1
CEACAM16
CRYGC
CRYGD
OR10V1
BCL2L1
POLE4
EPB41L1
SAR1B
TGOLN2
HSD17B2
PRELID3B
RHOBTB2
SOCS3
ZFAND2A
YAP1
PHLPP2
TTC13
ARV1
GRB10
RASA1
STARD13
VIPR1
MAP1LC3B
C1QTNF3
SLC3A2
NNAT
BLCAP
TOE1
MUTYH
HPDL
EXT1
TAOK3
MAMDC2
WDR74
STX5
SMIM3
TRIM48
EEF1A1
EAPP
MGAM
SOX2
POU5F1B
INTS9
HMBOX1
KLF4
WSB2
TMEM107
LOC102723996
ICOSLG
TFAP2A
ZBTB45
KCNE3
PMEPA1
DCAF6
ATP8B1
QSOX1
APOLD1
TOMM40L
APOA2
FCAMR
TACR2
ANKRD40CL
FHL2
SLC27A5
SLC6A7
PIGR
TMEM262
RTN4
IZUMO3
STIL
AP2S1
CDC14A
ZNF91
DCAF8L1
TBPL1
SLC25A27
CYP39A1
CHST7
NBPF1
RGS2
TSPAN8
ZNF608
QSER1
AFF1
ARHGAP35
GPA33
RAB6D
POU5F1
EPAS1
TDRD7
MAP3K14
RBM39
CABLES1
SPRED2
KIAA1217
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TSNAXIP1
RANBP10
SMG7
MPV17L2
DEPP1
FLNB
FGFBP1
PDE4D
DENND1B
LAMB3
GSDMB
FUT4
SOAT1
AKNAD1
WDR77
ATP5PB
ABHD11
LAMTOR4
B3GNT5
MLEC
RBM47
TES
WWC1
STX16
DCUN1D2
SIPA1L2
DCP1A
ALG10
CLDN12
LRIG3
ITPK1
GALNT5
KRAS
WASHC1
UGT1A6
SIRT4
SLC45A4
STARD10
RNF114
ANK3
STAT3
FCER1G
CDR2
RPUSD4
FAM118B
UGT2B10
KIF5C
SH3D19
MYOF
CHMP5
BAG1
MAVS
MRPS10
ITLN2
ATP10B
TGFBI
H3C15
H3C14
H2AC19
H2AC18
MUC12
ARHGEF12
IGFL4
ID1
GSN
RBM25
MACC1
IQGAP2
WHRN
VSX1
NRARP
ZZEF1
CYB5D2
HEXIM2
ARHGAP17
PES1
INTS4
ZNF3
COPS6
CELA3A
ZNF563
TBL1X
HACD2
DOCK10
HSD17B4
CCDC90B
ZNF226
DUS4L-BCAP29
DUS4L
COG5
CASP4
TFPT
PRPF31
GGH
SURF4
GEM
LGALS4
KIF16B
FCER1A
PTPRF
TUT1
MTA2
LNX1
ZC3H15
ETV5
SGK3
ABLIM1
SNX30
TMEM242
SLC17A4
SEMA3C
FABP1
TMEM69
HSD17B12
GPBP1L1
PPP1R12A
ZMIZ1
PMF1-BGLAP
PMF1
ZSWIM7
TTC19
ADGRE5
MGAM2
H4C12
H4C11
TMEM87B
SCT
IRF7
CDHR5
ATF3
PGP
E4F1
ROCK2
MARCHF8
RGS9BP
ANKRD27
MRPS16
IFRD1
MIA3
WDR89
IFI30
H2BC15
H2AC15
CHMP3
ACOX2
RNF183
PPP1R14A
FAM177A1
RTN3
ATL3
SEC23A
CXCL5
NXPE1
SLC33A1
ERLIN2
CLDN4
USP7
ST6GALNAC6
ST6GALNAC4
NEU1
METTL25
CCDC59
INAVA
TOB1
MYO18B
STK11
TAF12
RAB5B
PMEL
NXPE2
CXCL2
CDK2
TMPRSS4
SMIM35
NUF2
TM4SF4
RAP1GAP2
P2RY1
MRPS23
HESX1
FAM72B
APPL1
SFR1
SMCHD1
TXNRD1
CDX2
STAT1
RAB14
MROH7
KRTAP9-1
RBCK1
CMPK1
PKIB
PIK3C2A
HOXC11
CGGBP1
ARHGAP45
LIPH
CDK5RAP1
ADNP
PPARG
MCTS1
MAGEA11
KRT19
ELF3
SLC35A3
CASP5
MBNL2
COX20
CRYBA4
SLC25A13
RHOBTB1
ADGRF4
SLC38A1
KRTAP4-2
KRTAP4-1
KRT39
WFDC9
WFDC10A
EPS8
MIDEAS
LRRC59
SCYL3
WDR36
TXNDC8
LYSMD3
PAK1
IQGAP1
C3orf85
TMEM54
SOX30
REG1B
PTPRN2
CTSK
C5orf52
UQCRB
RGPD2
RGPD1
RARRES1
PPIL3
NIF3L1
FAM131B
CDK11B
CDK11A
UBB
JAGN1
CIDEC
VPS13A
VAV3
CREB3L3
NWD1
RIC8B
HNF4A
SCGB1D1
GBA
PTPN6
NFAT5
LYRM7
HINT1
C12orf57
RHEBL1
KMT2D
FAM111A
ZNF248
UTP3
TESK2
MMACHC
INSIG2
PSMD3
SRPK2
RBM15
KLHL30
CEP126
ANGPTL5
LIMA1
CAPN5
DDHD2
PTK2B
THAP9
SEC31A
MRPL44
ETFB
RABEPK
TMEM174
MTRNR2L8
INPP1
AKR1C3
METTL15
KIF18A
AHCYL2
CASC3
IL33
RGPD6
ENGASE
TBC1D30
FURIN
HSP90B1
ARHGEF10L
RPSAP58
PRSS3
DLAT
NUDC
NR0B2
MALL
ELAPOR2
SCAF11
RNF31
RNF186
PSME2
EMC9
NUDCD1
TPD52
PRKCZ
DNAJC9
PRKAB2
CHD1L
ZMPSTE24
ACAN
PLAAT2
JMJD1C
FNIP2
FAM86B1
PRDM4
CCDC88A
SLCO4A1
DENND1A
BCL10
TARDBP
ATP2B4
MYH4
SMC2
C19orf33
SUGT1
ITSN1
CRYZL1
ARHGAP27
SLC25A41
OIP5
NUSAP1
KHSRP
RFLNA
AMOTL2
TPCN1
CDC14B
CLGN
ANO4
COX16
CALML4
TM7SF3
SGO2
MED21
TMEM186
PPP2CB
PMM2
NPIPB4
ARHGDIB
PREPL
CAMKMT
SALL4
PADI2
MKX
EIF2AK3
G3BP1