ChIP-Atlas: Target genes

Potential target genes for CDX2

Query protein: CDX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11605390 | UiPSM
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDX2's Target genes

◢ CDX2: Average

◢ SRX026263: Caco-2

◢ SRX026264: Caco-2

◢ SRX9964512: Caco-2

◢ SRX9964513: Caco-2

◢ SRX077859: COLO 320

◢ SRX077860: COLO 320

◢ SRX701961: hESC derived mesendodermal cells

◢ SRX15207281: hESC derived pancreatic cells

◢ SRX15207282: hESC derived pancreatic cells

◢ SRX359927: LoVo

◢ SRX096353: LS-180

◢ SRX096354: LS-180

◣ SRX11605390: UiPSM

◢ SRX11605391: UiPSM

◢ CDX2: STRING

MTRNR2L1
FRG2C
DUX4
EEF1A1
SOX2
KLF4
POU5F1B
POU5F1
LOC102724770
DGCR6
FRG2
ARL4D
COL23A1
OR2T1
FAM86B1
SKA2
PRR11
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ITSN1
CRYZL1
CCDC200
MEX3C
OSBP
FAM72C
FAM72D
RBIS
PGAP2
MS4A1
EIF2AK3
NOCT
RMI1
HNRNPK
ENSA
AGBL3
TPR
ODR4
THG1L
HOXA3
HOXA4
DNAJC27
ZNF33B
PNPLA8
DNM2
RBM15
HOXA6
HOXA5
TMEM53
ARMH1
NUDCD1
MFAP4
MAPK7
B9D1
PBX3
ATG10
ATF7-NPFF
ATF7
MLH1
EPM2AIP1
PURB
PDIA4
DLD
PPP2R1A
CAMTA1
OSGIN1
BRMS1L
ZNF333
SCAF1
RRAS
RABGAP1
STRAP
ZBTB26
RBM27
JOSD1
GTPBP1
TIPARP
MIER1
DNAI4
ASF1B
PROS1
ARL13B
SP1
PCLO
OGDH
HDGFL2
AHCTF1
COL5A2
NEK2
IPO11
DIMT1
STAT3
SEC23B
SETD3
CCNK
NMT1
DCAKD
TMBIM4
TMEM230
PCNA
C10orf143
TLN1
CREB3
ZNF799
COQ10B
HOXB3
HOXB4
CLP1
ZDHHC5
IKBIP
APAF1
SPAG7
CD55
RWDD1
RAB5B
PMEL
CDK2
CBLL1
SUCO
MAD2L1
HSPA13
ZNF140
ZBTB5
JAK2
TLE4
COQ7
INSIG2
OPA3
MRPS16
DNAJC9
HNRNPD
USO1
EEF2KMT
MCM3
WDR89
TOM1L2
DRC3
PABPN1
PARP2
CCNB1IP1
FAM160A2
CNGA4
DMXL1
TIAL1
SKAP2
SNX14
EDEM3
TMEM60
PHTF2
MXD1
RAP2A
KMT5C
PAPOLA
C5orf51
TECR
DNAJB1
CDK19
AMD1
SLC39A10
CLDN4
FBXO30
CANX
EVI5L
OGFOD1
NUDT21
HERC4
ING4
MLEC
TRIQK
TSTD2
NCBP1
MAP3K3
OSBPL9
MTRNR2L2
MSH3
DHFR
LCORL
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNNM2
HOXB9
HOXB8
HOXB7
SLC35B4
RRM2B
ETF1
SLC33A1
CNOT4
MTR
HMGCS1
AP3S1
CNOT1
GCSH
USP15
HNRNPL
CNOT3
ZNF891
ZNF10
SGCE
PEG10
G3BP1
GOLGB1
TRIM23
TRAPPC13
SHLD3
ZNF25
HSPE1-MOB4
HSPE1
HSPD1
TOMM40
FBXO5
RABGEF1
THRAP3
L3HYPDH
JKAMP
DCP1A
SDK2
FAM72B
THAP5
DNAJB9
SLC25A28
RSU1
CCDC138
SUPT3H
DDX42
CCDC47
HOXB6
SETDB2-PHF11
SETDB2
CAB39L
TP53RK
SLC13A3
LRRIQ3
FPGT-TNNI3K
FPGT
C9orf85
ABHD17B
THAP9
SEC31A
H2AZ2
MBD4
IFT122
USP1
TMEM106B
SMYD3
TCAF1
DESI2
PPP1R12A
ZNF143
SLC25A46
KMT2A
SNX12
ZFP64
HOXC6
HOXC5
NPY4R2
NPY4R
ZNF76
CDK5RAP3
GATA6
PRR15L
MAMDC2
C20orf204
MALRD1
C1orf100
ACVR1B
DPP4
WDR74
STX5
TSPAN3
ART1
UBR2
ABCB1
RDX
MUC3A
FKBP1A
USH1C
OTOG
COG1
OR10V1
DUT
PKDCC
RHBDD3
EWSR1
CEBPG
FABP7
OR9Q2
GFOD2
SPOCK2
GLYATL1
GPR84
RBBP8NL
CYP2R1
ABR
LRRC4
RHOH
NFKBIZ
MEP1A
KRT8
ARL14
CXCL9
ART3
LGALS3
HOXB5
EPRS1
AGMO
TOR1B
PNLDC1
HOXC4
ZNF169
SMIM3
WBP4
ELF1
PITX3
GBF1
PLAUR
RIN2
GNPAT
C1orf131
SF3B4
MTMR11
SLC2A8
AP1M1
PHRF1
CREB3L1
RGMB
SULT2B1
RARB
SLC30A10
RALB
TRIM2
HOXC8
FGG
ZBTB38
ATXN1
TRIM48
MICAL2
SFRP2
ISX
PDE4DIP
LECT2
CERK
ANO6
EAPP
PRLR
ZNRF3
CD300LF
CEACAM5
LRRC19
MGAM
C1GALT1
GUCY2C
MORC1
GRAMD1A
REG4
PHYHIPL
IGSF23
HK1
INTS9
HMBOX1
LRRC69
CA4
CHI3L1
MEIS1
GPR160
KIAA2012
PRICKLE1
GINS1
PRSS41
SPATA46
C1orf226
PLRG1
PDGFRB
CDX1
PLS1
THUMPD3
FOLH1B
CDH17
HES1
HNF4G
PDE6A
UGT1A1
SI
COL21A1
WSB2
ABHD12
NTF3
TMEM107
PHYKPL
EPHB2
FGB
TNFAIP8
LOC102723996
ICOSLG
C17orf78
NAV2
ST3GAL2
FCSK
DEPDC7
HKDC1
TFAP2A
RNASE6
LUC7L3
HEXB
ARHGAP32
PDZRN3
ZBTB45
GSTP1
MYEOV
PCED1B
AMIGO2
KCNE3
PMEPA1
KRTAP3-2
DCAF6
FAM72A
CD244
SLC12A2
FAM20A
ATP8B1
QSOX1
SYBU
APOLD1
TOMM40L
APOA2
FCAMR
TATDN1
NDUFB9
ATE1
CNGA1
TACR2
PLEKHG3
MATR3
ANKRD40CL
PI3
PKP2
MTCL1
FBXO31
PHLPP2
CAST
FHL2
SLC27A5
CEACAM16
SLC7A6
PLEKHM3
SLC20A1
DNAJC25-GNG10
DNAJC25
RAMP1
SLC6A7
KRTAP3-1
CEBPA
NAA20
PIGR
AMACR
TMEM262
GOLIM4
YWHAZ
SMAD5
DUSP18
CACNA1D
POTEJ
NAPEPLD
CFC1
LAMA3
PIK3R1
NIPAL1
SLCO2B1
ALDH3A2
SMIM10L1
PRH1-TAS2R14
PRH1
IL34
SPAM1
RTN4
COX5A
GYS2
IZUMO3
C2orf88
STIL
AP2S1
IL37
CDC14A
PAPSS1
C3orf52
PRKG2
CLRN3
ZNF91
TTC13
ARV1
PRSS33
TMEM45B
H3C7
H2BC9
DCAF8L1
PTCHD1
TBPL1
CHST5
TGIF1
LRRC66
SLC25A27
CYP39A1
TMEM106C
CHST7
NBPF1
MGAT4A
WWC2
RGS2
KMT2E
EML1
ADD3
TSPAN8
ZNF608
QSER1
CAPN2
TRPC3
AFF1
NOS2
ALS2
ARHGAP35
LCT
TMIGD1
HOXC10
HNMT
GPA33
RAB6D
HAND1
EPAS1
TDRD7
GCG
EIF4G3
PTH
MAP3K14
TNFSF15
RBM39
TMEM141
GALNT11
CCDC183
CABLES1
NSMCE1
SLC1A1
TMEM38B
PFKP
SPRED2
KIAA1217
TSNAXIP1
RANBP10
SLC25A44
SMG7
MPV17L2
ATP9A
GSG1
DEPP1
FLNB
GCNT4
FGFBP1
PDE4D
DENND1B
B3GNT6
LAMB3
GSDMB
FUT4
SOAT1
AKNAD1
WNT5A
VIL1
WDR77
ATP5PB
ABHD11
LAMTOR4
RNF32
HEPH
RTN1
GRAMD2B
B3GNT5
RNF145
HOXC9
LOC388282
KIFC3
TMEM170A
GATM
EPCAM
RBM47
TES
WWC1
STX16
MS4A18
DCUN1D2
SIPA1L2
RNPEP
ALG10
CLDN12
FCMR
LRIG3
SEH1L
ITPK1
LRRC18
GALNT5
KRAS
WASHC1
UGT1A6
PLEKHG1
SIRT4
SLC45A4
PRELID3B
MAIP1
STARD10
RNF114
COBLL1
ANK3
FCER1G
TDRD1
CCDC186
CDR2
SLC26A2
RPUSD4
FAM118B
UGT2B10
KIF5C
SH3D19
MYOF
CHMP5
BAG1
MAVS
LRP2
DNASE1
FAR1
YAP1
MRPS10
ITLN2
OLFML2A
NR6A1
MAPK10
ATP10B
TGFBI
MGLL
H3C15
H3C14
H2AC19
H2AC18
SERPIND1
MUC12
ARHGEF12
IGFL4
ID1
GSN
FNTA
EHBP1
RBM25
PTP4A1
MYRF
MACC1
HEPACAM2
GGT1
AKAP7
IQGAP2
WHRN
VSX1
NR5A2
NRARP
MBNL1
ZZEF1
CYB5D2
HERPUD1
HEXIM2
ARHGAP17
PES1
TFEC
CYTH3
INTS4
DHRS3
EPB41L1
ZNF3
COPS6
CELA3A
ZNF563
TBL1X
HACD2
DOCK10
HSD17B4
FAM53B
CCDC90B
ZNF226
JMY
DUS4L-BCAP29
DUS4L
COG5
CASP4
TOE1
MUTYH
BTG1
TFPT
PRPF31
GGH
SURF4
MTUS1
ANXA4
GEM
LGALS4
KIF16B
KCNIP2
DEK
FCER1A
PTPRF
TUT1
MTA2
LNX1
ZC3H15
ETV5
SGK3
ABLIM1
SNX30
TMEM242
RNF43
PTCD1
CPSF4
SLC17A4
SEMA3C
FABP1
TMEM69
HSD17B12
GPBP1L1
ZMIZ1
PMF1-BGLAP
PMF1
TBX4
ACTR3
ZSWIM7
TTC19
ADGRE5
INTS8
CPS1
SPINK1
STAM2
SAR1B
MGAM2
H4C12
H4C11
TMEM87B
SCT
IRF7
CDHR5
ATF3
PGP
E4F1
ROCK2
MARCHF8
SELENON
S100A10
RGS9BP
ANKRD27
MPP6
IFRD1
MIA3
PISD
IFI30
H2BC15
H2AC15
CHMP3
MAP1LC3B
ACOX2
RNF183
PPP1R14A
FAM177A1
RTN3
NHS
ATL3
SEC23A
CXCL5
NXPE1
ERLIN2
SLC22A2
USP7
ST6GALNAC6
ST6GALNAC4
NEU1
METTL25
CCDC59
SNTB1
INAVA
TOB1
MYO18B
ERVMER34-1
TAS2R46
STK11
TAF12
PPM1L
NXPE2
CXCL2
TMPRSS4
SMIM35
NUF2
TM4SF4
RAP1GAP2
P2RY1
NNAT
EPHX2
CHRNA2
BLCAP
MRPS23
TATDN3
NSL1
HESX1
APPL1
SFR1
RHOBTB2
TEX19
SMCHD1
FAM107B
KLHL8
TXNRD1
CDX2
STAT1
RAB14
MROH7
KRTAP9-1
TSPAN12
PRDX6
RBCK1
CMPK1
POMT2
PKIB
MLLT3
GSTZ1
PIK3C2A
HOXC11
CGGBP1
ARHGAP45
TLE3
LMO7
CYP2W1
COX19
PYROXD1
LIPH
CDK5RAP1
ADNP
PPARG
MCTS1
MAGEA11
KRT19
ELF3
SLC35A3
FOXN3
FKBP4
CASP5
MBNL2
COX20
CRYBA4
SLC25A13
PDXDC1
RHOBTB1
ADGRF4
TAOK3
CDON
SLC38A1
KRTAP4-2
KRTAP4-1
KRT39
RMDN2
WFDC9
WFDC10A
ANKDD1B
PERCC1
OR10AD1
EPS8
MIDEAS
LRRC59
SCYL3
WDR36
TXNDC8
LYSMD3
PAK1
IQGAP1
C3orf85
TMEM54
SOX30
REG1B
PTPRN2
CTSK
C5orf52
UQCRB
RGPD2
RGPD1
RARRES1
PPIL3
NIF3L1
FAM131B
CDK11B
CDK11A
UBB
ZHX3
JAGN1
CIDEC
VPS13A
AKAP9
VAV3
CREB3L3
NWD1
RIC8B
DLX4
HNF4A
SCGB1D1
NECTIN1
GBA
PTPN6
NFAT5
LYRM7
HINT1
C12orf57
RHEBL1
KMT2D
HPDL
FAM111A
ZNF248
UTP3
TESK2
MMACHC
TMED9
STOM
BCL2L1
IKZF2
PSMD3
TMEM126B
SRPK2
DLG2
KLHL30
CEP126
ANGPTL5
AADACL3
LIMA1
CAPN5
DDHD2
PTK2B
MRPL44
ETFB
RABEPK
TMEM174
MTRNR2L8
INPP1
AKR1C3
METTL15
KIF18A
AHCYL2
CASC3
IL33
RGPD6
ENGASE
UTS2R
TBC1D30
BIN1
FURIN
HSP90B1
ARHGEF10L
RPSAP58
PRSS3
DLAT
NUDC
NR0B2
MALL
SLA
ELAPOR2
SCAF11
RNF31
RNF186
PSME2
EMC9
TPD52
PRKCZ
PRKAB2
CHD1L
HOXD4
ZMPSTE24
ACAN
PLAAT2
ARF6
TMEM200A
SAMD3
JMJD1C
RASA1
FNIP2
PRDM4
CCDC88A
SLCO4A1
DENND1A
BCL10
TARDBP
ATP2B4
MYH4
ZNFX1
ZNF285
SMC2
C19orf33
SUGT1
ARHGAP27