ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
PITX2
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
ID2
LEFTY2
NPM3
FGF8
CAV1
PRKAB2
CHD1L
SNX18
ZNF148
SKIL
PLAGL1
COPS8
STOX2
SLC6A15
PMF1-BGLAP
PMF1
AGO1
ID1
SMAD7
LEFTY1
FBRS
POU5F1
MTRNR2L2
MSH3
DHFR
NEURL1B
BMPR2
GAS2L1
SPACA6
NPFFR2
WDR74
WNT3
BCL11A
MRI1
EOMES
ALDH7A1
STAM2
MDN1
KLF10
FAM20C
OLFM2
CEMIP
ASIC1
SMAD3
POU2F3
FAM178B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PPP2R2A
SUPT6H
SDF2
CHST11
ZNF853
ZSWIM4
UNC45B
MUC3A
NPAS4
LARS2
SETD1B
ETS1
BUD13
NOCT
SREBF1
ZSWIM7
TTC19
LRP6
RNF32
DPPA4
NOTCH3
KAT6A
FOXJ3
LDLRAD4
LRRC37A3
MARCHF3
ADAMTS5
MLLT11
CDC42SE1
DRAP1
C11orf68
GRIK2
MTIF2
TAF13
FAM184A
CALD1
OCA2
GAD1
TULP4
MAP7
GALNT9
MARCHF5
CPEB3
HOXB13
CER1
NUF2
MTRNR2L1
MTRNR2L8
EP400
NEDD4L
GAB1
JMJD1C
CHD2
CCDC200
CYB561
LMLN2
RPRM
CD8A
DCAF10
DST
RCBTB2
CD101
MTHFD1L
ABLIM1
USPL1
HMGB1
ESRP1
PTGS2
ANKRD46
ATP9B
CCDC88A
HDGF
MAMDC2
UGT1A3
MMP9
NSUN6
BAMBI
GNB2
NRL
PCK2
NOTCH2
UTS2B
CCDC50
RET
UAP1
RAPH1
LRRC59
EML1
SNX14
WWC2
PNMA1
TBC1D5
WT1
TEAD4
PLPPR3
SMAP1
GNL2
MRPS36
DNAJC6
PMAIP1
ZNF609
PTPN18
OAZ1
ARL4A
SLC20A1
GRM1
E2F3
GPR180
SMIM8
PCCA
VANGL2
NTM
TBX22
BOD1L1
ERCC1
ID3
MIPOL1
ATXN7L2
MAML3
COPS7B
FAM168A
HTR5A
GIT1
ANKRD13B
TRDMT1
HINT3
AFF1
TFAP2A
USP47
NFIA
RANGAP1
ZC3H7B
RCAN3
C3orf52
RNF213
KANSL1L
JDP2
ZFYVE16
DGAT2
RGPD8
RGPD5
RGPD6
BAZ2A
XKR7
WDFY1
P2RY2
EPB41L4A
CGB3
LHB
KHK
NCOA3
EPN1
RAB23
OR6J1
SLCO5A1
ZNF521
USP15
SAR1B
LHX1
IKZF5
ACADSB
PCDHAC1
FEM1C
CNOT3
FDXACB1
C11orf1
RRP8
ILK
MTDH
ZNF775
ASCC3
LOC100287896
LIPT2
KDM5B
ROR2
FBXL12
C4orf36
LEMD3
SRF
CBWD5
CBWD3
CBWD6
LSM14A
TLE1
NARF
PARL
SOWAHC
SEPTIN10
FAM227B
DTWD1
BCL6
MARCHF4
SHISA8
CYBC1
RNF103
TLCD5
MMP24OS
MMP24-AS1-EDEM2
IQSEC3
MRPL39
SMPD4
MZT2B
GGT7
ACSS2
AMOTL1
PDE4DIP
GTF2H2
NRSN1
TSPAN12
RNF11
FAM162A
CCDC58
PXK
PPT1
IGF2BP3
GADD45G
REEP5
MCOLN1
MEX3B
KIF2C
FRG2
MTRNR2L9
FRA10AC1
NCOA5
XPO5
POLH
SEC22B
BCAP31
ABCD1
TNPO1
TTC39B
PRC1
SYNJ1
C9orf40
REST
TMEM121B
LRP12
CDH15
MNAT1
MAST4
SLC44A1
MFAP3L
SLC4A9
RNF6
TCEAL8
AVPR1B
LPCAT3
IFT52
NCOR2
ZBTB45
NTMT1
E2F2
LRCH1
C9orf50
TMEM215
ACSL3
ERLEC1
ASB3
NMRAL1
HMOX2
USP37
CNOT9
CPNE4
CTNNB1
KLHL18
KIF9
PPY
MYO6
TBPL1
ZNF395
ERI1
OCIAD2
MRGPRG
LRAT
BCR
CDKN2AIPNL
DCP1A
CASP3
STX16
EXOC2
ZNF341
TPI1
ARHGAP28
FAT1
BAIAP2L2
ZNF839
SPSB2
CHST13
OR8B3
PIGO
TMEM250
PICK1
POLE3
C9orf43
AGO3
PDE1C
PTBP2
CEMIP2
AQP2
TCF7L1
HEXB
ARHGAP26
CERCAM
ERBIN
GTF2H2C_2
GTF2H2C
EXD1
CHP1
FOSL2
NAV2
ROR1
PDE4B
TUBB
MDC1
CCNH
NFE2L3
EIF2B2
GLRA3
RTN4
GARS1
PPIH
BMF
ZDHHC23
TBCK
AIMP1
LTF
USP42
NTSR2
CRBN
CHN2
SLC1A1
CPVL
LOC728392
HTR1E
DDIT4
CXCR5
ERMP1
ZCWPW2
AZI2
METAP2
PCBP1
LAMC2
NUDT2
MOB4
KIAA1841
WBP1L
ANKRD18A
SEC22A
ITGB1
HDAC2
VCAN
FAM153B
RWDD1
GADD45B
EFHD1
FABP6
MRM3
GLOD4
IQGAP2
GRID2
TFAP2D
CAMSAP2
TMEM132A
C1GALT1C1L
NGFR
OR1E3
KLF17
TNFRSF12A
CLDN6
BHLHE40
BPTF
SOCS2
DESI2
POLR3E
AAR2
NCBP3
FCHO2
ATP23
B3GLCT
TMEM170A
SHF
LAYN
CFAP161
BRIX1
ZNF354A
AK3
IFNGR1
PRMT9
USP53
EIF4G1
ULK2
RFX4
MRPL2
KLC4
DNAJC10
ZNF654
CGGBP1
ZFHX3
OXTR
DUX4
KIFC3
TUT7
FGF1
TXNL4A
RNASE10
NPIPB9
LIMK2
RFESD
CCDC107
FGF19
MEIG1
UCHL1
SEC62
GGH
FNBP1L
MANEA
SDHA
CCDC127
ELMO1
OPRM1
UBA1
TTC9
NLGN1
GDF7
C12orf42
DHRS13
TEFM
NDRG2
VPS28
HMGN2
PRKAA1
ARHGEF40
HBEGF
BTC
AKAP12
PRDM8
GTF2A1L
GLIPR1L1
CAPS2
ARL6IP1
KBTBD2
FXR1
NIT2
GNAS
NXPE3
MTARC2
RPGR
STMN1
EPCAM
MED23
HABP4
GTF3C3
XYLB
SLC24A1
ST6GAL1
SCOC
GABRG3
ZNF165
HECTD1
MAP2K1
ZNHIT3
C12orf73
OSBP2
MDFIC
CYP26B1
ANKK1
SLC9A1
PIK3R3
BAIAP2
SLC35E2B
PDE8A
SMIM10L1
PRH1-TAS2R14
PRH1
HEY2
MKX
MAPK15
FAM177A1
SLC39A6
ELP2
RUBCN
FYTTD1
LLPH
CLTC
UBE2B
CDKL3
CCNL1
CCNI
MLLT6
UBE2D2
PET117
KAT14
ZNF641
ZNF48
HSP90AB1
PRDX1
PRUNE2
CDC42EP3
DMRTA1
TBL1XR1
KSR1
KATNA1
GNAI2
LIG4
ABHD13
TMEM98
NMNAT2
PABPC5
CPLX2
HERPUD2
XRRA1
SPCS2
NUDCD3
UCHL5
RO60
SOX12
EYA3
PROSER1
NHLRC3
PDE8B
GATAD2B
RMDN2
ZNF385A
ATAD2
PLK3
TMEM242
USP22
PHTF1
CDK6
NANOG
MRPL38
CCPG1
C15orf65
HES1
STX18
PLEKHM3
RIPK4
PHIP
SPAST
AKAP9
TOR2A
PPARGC1A
GNAL
RBM15B
FYN
SOWAHA
ITGAV
THAP4
ATG4B
C16orf92
PARK7
KLHL23
TEKT3
KCNH5
ATP5MPL
RUSC2
CHIC2
IL20
ANKRD50
HEXIM2
IQCH
AAGAB
FILIP1L
FGFBP3
DNAJC19
SPEF2
AMT
NAALAD2
DHRS3
BICD1
DEGS1
TPD52
NLE1
MTMR6
ZNF860
OSBPL10
SPOP
C15orf40
CCDC71L
TRIM9
CYP2U1
FAM151B
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
HIVEP2
SIK2
C8orf37
FAM98B
TSPAN14
L1TD1
SETD7
MTF2
STK10
NDUFS3
KBTBD4
FAM120B
BORCS6
DLL1
MAP3K4
KTN1
NPIPB6
EBAG9
PURA
ELK4
TAF12
SLC34A3
RNF224
CYSRT1
FAM107A
NAT8L
CALB1
MSX2
KDM6B
GPC6
NFKBIA
METTL9
AFF4
TIPARP
TGFA
BLMH
CDC37L1
INKA1
CDHR4
MBOAT2
GALNT15
ZNF419
FAM221A
SYN2
CALM2
HNRNPR
TMEM37
PAK1
ARIH1
HCN1
AMPH
MCM7
AP4M1
AFG3L2
NRSN2
SKA3
MRPL57
PRMT5
LRRC37B
SNAPC5
HTR7
CRYBG1
PLCH1
KCNQ3
GOLGA6L7
COL23A1
SST
AMOTL2
MKRN2OS
MKRN2
MYO1D
MND1
FAM222B
FUT8
DLX6
THOC2
DSTYK
BCL9L
MSRB2
ANKRD12
GAREM1
MUC12
SFRP2
CTSL
TRIAP1
RTKN2
KCNH1
TMEM202
PLCL2
RBPJ
ZC3H6
ASAP3
DNAJC3
ADAMTS3
AP3B1
WNT5A
RAD54L2
HIPK1
CYP2R1
METTL2B
SLC30A5
INTS12
GSTCD
PHACTR2
AMFR
FOXN3
TMX3
CCDC102B
HECTD3
PLAAT1
TPTEP2-CSNK1E
SSBP2
SYDE2
ALK
PKN2
TMEM263
GEMIN4
BEST4
GAD2
NKX1-1
DCP1B
TMEM267
SLC35E1
BAZ2B
CEP78
POT1
TJP3
GNG3
BSCL2
SERPING1
CNTNAP3
TGIF1
SLC35G1
BAZ1A
STK32C
LRRC27
RPTOR
ANKRD18B
FUT1
FGF21
EPHA1
CALM1
ARL5A
MEF2A
STEAP3
NAA40
RYR1
UAP1L1
NCKAP1
SUMF2
TATDN1
NDUFB9
YAF2
EXD2
SLC2A9
CDKN2A
ADAMTS18
MAT2A
CARNMT1
FERMT2
OAZ3
ADRA1B
MS4A1
CNTN4
TCF12
HES6
PTPN4
HNRNPD
PAWR
TRMT6
MCM8
TEX10
TTLL7
BHLHE41
RIMBP2
CABIN1
ACOT7
SLC35A3
TTLL9
RAB11FIP3
FRMPD1
SYT14
RNF166
CTU2
DTD2
TBX6
YPEL3
MAPKBP1
AIFM3
CD99L2
FRG2C
VDAC2
TSKU
CCN2
IFRD2
C17orf75
NR1H3
ACP2
LYRM1
DCUN1D3
MECOM
CCDC43
SEMA6A
MRPL40
HIRA
POLD4
CREBL2
ARID2
FBXO22
SMPDL3A
AXIN2
MAP4K5
ATL1
VPS18
DHRS4L2
THRB
SEC11A
MYO1B
B3GALT1
AS3MT
SNTG2
NSUN7
CCKBR
IKZF3
ZPBP2
HECTD2
LONP2
ABCC11
SPRYD7
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
DYRK3
STK17A
HNRNPA2B1
CBX3
CHST15
TFPI
GPHN
CACHD1
VGLL3
ACOXL
C8orf88
SEPSECS
ATG7
BARD1
RBIS
TCF4
MPHOSPH8
XKR4
SLC44A2
KCTD18
ARHGEF1
ELF2
COMMD8
SPAG1
TTC14
CCNL2
NUP153
ZBTB2
TTC23L
PSMF1
LOC101928764
RBM47
YARS1
S100PBP
SSH2
EFCAB5
NCR3LG1
PCID2
CUL4A
TAP1
PSMB9
PIK3C2B
PRLHR
ATAD1
KATNIP
GTF3C1
LOC107986453
UBN2
RBMS1
FKBP5
ARMC12
SUCO
EIF3A
URB2
TAF5L
TRAPPC11
RWDD4
SUPV3L1
ZNF846
RWDD2A
PGM3
TM2D1
UQCRC1
ZNF280C
NOL11
RNF144B
SRSF5
HERC6
TTC37
ARSK
GALNT3
GCLM
ATR
FZD1
RANBP2
SDE2
USP3
LDHA
RB1
ASAH1
FEZ2
RCOR2
SNRPN
OR2T1
TIMP4
USP30
FGD4
TMEM60
PHTF2
PIGH
MKS1
IL17RA
PRSS16
STXBP5L
DENND4B
CORO2A
GOLGA8A
MIXL1
NEIL2
FSIP2
SLC35G4
FAM83B
UBE2Z
HBS1L
SNX19
SIDT2
FGF9
SOX14
SLC25A51
CCDC8
PATZ1
CAMK1D
APCDD1
ELAVL2
MDP1
CHMP4A
ZSCAN22
PCMTD1
RBP1
RSPO2
SUGCT
MPLKIP
PDCD6IP
FAM43A