ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

GSK3B
TRPC1
APTX
DNAJA1
H1-2
GLUL
MAMDC2
CLSPN
MCL1
H4C3
H1-6
KANK1
KMT2E
MYLIP
SPTAN1
H4C11
SKP1
COQ10B
FAM53C
CDC25C
C6orf62
SETD5
IFRD1
LRCH4
FBXO24
H4C12
ID4
KLF7
SRSF7
EIF2AK3
HNRNPA2B1
CBX3
SRSF3
PRKRA
PJVK
HNRNPH1
NASP
ZCWPW1
MEPCE
S100A13
CHTOP
DDX59
ANKRD17
JUN
KIF27
SREK1
SLC39A10
ARL15
ARF4
DENND6A
ISCA1
H4C5
KDM4A
FAM168B
MRPL35
IMMT
TTI2
H3C6
HSP90AB1
PFKFB3
IER5L
EEF1A1
SLC9A1
FEM1C
SECISBP2
POLR3D
H2AZ1
DNAJB14
H3C15
H3C14
H2AC19
H2AC18
DDX1
ZFAND5
HSPA1B
H3C12
H2BC17
H2AC17
MTHFD2
ACTB
ZC3H6
H4C14
SARAF
AFF1
ZBTB37
TGOLN2
PRDX1
RPL5
SMIM14
CTNNB1
POMZP3
RPS20
PABPC1
TRA2B
H4C15
NDRG1
NAGK
TRA2A
ACTL6A
KPNA1
MAK16
CENPC
H2BC8
H2AC8
DDAH1
CCN1
NFYC
SESN2
PPIA
TM2D1
CCN2
UBR4
H2BC5
H1-4
UBE2D3
H4C2
H3C2
H2AC4
NABP1
YWHAQ
HSPA5
IER5
WDR1
PTPN14
CAMSAP2
H2BC11
H2AC11
ZNF326
SFPQ
SLC16A1
H2BC12
H2AC12
HDAC4
USP48
DUSP1
S100A1
CAP1
PPIL3
NIF3L1
ZNF644
CCNG1
PPP1R10
MRPS18B
DNAJC25-GNG10
DNAJC25
CNN3
H2BC15
H2AC15
TSC22D2
TUFT1
EIF4A2
UFL1
CCND3
TAF8
RPS12
ZSCAN31
ID2
MAP3K2
RHOB
SLC20A1
FAM3C
VCP
SLIT2
CELSR3
DNAJB5
H2BC21
H2AC21
H2AC20
TMEM18
MAT2A
FER
FSCN1
CYP20A1
POR
TMSB10
PITRM1
PDE7A
SDCBP
BAZ2B
RPS27
RAB13
HNRNPDL
ENOPH1
NREP
TMEM242
RPL12
LRSAM1
FAM200B
UAP1
UBAP2
GPATCH3
H2AC16
H1-5
H3C11
RCC1
MMADHC
DCAF8
ASH2L
POLR2J3
MATR3
USO1
RPS6
CALM2
EPM2A
CLDND1
THUMPD3
STK17A
TUBB4B
ATXN7
AKIRIN2
GADD45G
ELMOD2
PLK2
STT3B
LBH
ACTRT3
MYNN
PLK4
GTPBP8
CACYBP
TARDBP
RNF220
AMOTL2
RPN1
FXR1
TOR1AIP2
TOR1AIP1
RFX3
RABGEF1
NFKBIZ
ZBTB5
THAP5
DNAJB9
SERTAD2
RMI1
HNRNPK
BZW1
HERPUD2
PIK3R3
BCLAF1
GORASP2
H2BC7
H3C4
H2AC7
MKLN1
AZIN1
FN1
H4C4
TRMO
ATG10
SRRM1
PPP2CA
PCBP1
USP40
FILIP1L
TENT5C
OR2T1
UBTD2
ITGAV
H2BC4
H2AC6
LATS1
MTRNR2L1
SKIL
PRKAB2
CHD1L
DUX4
COPS8
FBRS
ARID3B
MTRNR2L2
MSH3
DHFR
WDR74
PMEPA1
NPAS4
FRG2C
ERCC1
SIRT1
MTIF2
MLLT11
CDC42SE1
ZNF148
SMAD7
MUC3A
TMEM95
KCTD11
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
FDXACB1
C11orf1
XKR7
RBPJ
OLFM2
SERPINE1
DNAJB2
STAM2
PPP6R1
RNF103
ID3
TRIB1
ZNF664-RFLNA
ZNF664
CCDC92
PPP1R13L
POLR1G
ID1
IQSEC3
JMJD1C
LPCAT3
MIPOL1
HTR5A
BIRC7
NKX1-1
GIP
FZD5
GNB2
BMPR2
LRP12
FSTL3
MTRNR2L8
GSDMD
SMAD3
KLF10
NOS3
DHRS3
F2
LAPTM4B
CCDC200
KDM6B
FRG2
FAM24A
HOXA3
SLC7A5
EXOC2
NDUFAB1
CCDC88A
EP400
ATAD2
MARCHF3
ZNF341
LRRC37A3
TMEM9
LIN28A
CLDN14
INSM2
UBE2F
RCOR3
MRPL2
KLC4
MTHFD1L
PDLIM7
ZBTB45
RCL1
NTMT1
REV1
VDAC2
GLIPR1L1
CAPS2
H2BC6
RNF213
TAF9
RAD17
AK6
SLC45A4
BCAR1
TUBB
MDC1
USP42
CLTC
TBC1D1
SNX16
PLEC
COL7A1
DRAP1
C11orf68
RHOQ
ATP6V1E2
TGIF1
CPLX2
SLC7A6
TMEM222
BRWD1
MMP20
OPLAH
BRPF1
LIMS1
CAT
ACVR1
LRP6
MDM2
TRIM48
SPIN1
BCAP31
ABCD1
MRPL38
LRRC61
SLC44A1
CFLAR
FCRLA
AIFM2
ADAM17
JRK
LMNA
PGLYRP4
SPACA6
PLK3
PLEKHA7
H2AZ2
RBFOX2
P2RX6
FBXL13
ARMC10
HPN
TEX46
ZNF718
TRIM44
DGAT2
PLEKHF2
ZNF595
SREBF1
LURAP1L
TBC1D14
RWDD1
PLOD2
STK11
GPC6
TNFRSF12A
CLDN6
RGS3
LEMD3
SPATA9
RHOBTB3
KDM1A
CCNL2
MFSD10
GZF1
GPT2
E2F3
PIK3IP1
OTUD7B
ETFB
CANT1
MAN1A2
BAMBI
ITPK1
FURIN
SNX14
CD8A
LARS2
NHLRC1
THOC6
PIM1
HCFC1R1
PHETA1
ST6GALNAC6
NDE1
MARF1
ZFAND2A
NRL
BHLHE40
NOTCH2
CCPG1
C15orf65
TAGLN2
SH2D6
TMEM268
HNRNPR
TNIP1
ARL6IP1
USPL1
SMAP1
HMGB1
PIK3R1
ARFGEF2
NFKBIA
PSPN
ALKBH7
SERPIND1
MAP3K4
TLE1
MOB4
RNF19A
MACC1
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
STMN3
SKI
CFL1
KRAS
PRAME
MET
SLC39A7
RXRB
PUF60
WDFY1
TEX45
ADAP1
INHBE
IER3
FLOT1
UBE2B
CDKL3
SQSTM1
CDK19
AMD1
BCKDK
S100P
ANKS4B
HIBADH
TRAF7
THAP11
NUTF2
CENPT
RNF144A
SPATA25
SYNPO
CYP26A1
C3orf86
HPCAL1
RFX1
ASIC1
TMC7
ZBTB38
NR4A1
KDM7A
CTSL
LOC100287896
LIPT2
NEU1
LRP5L
SLC39A13
CDK5RAP2
XRRA1
SPCS2
PKDREJ
CCL16
SMIM11B
SMIM11A
ARL4A
RNFT1
NDST1
GNL2
TUBG1
RETREG3
KBTBD2
MTF2
NODAL
MARCHF7
SSBP2
FOXJ3
ASB2
LZTR1
SERPINB6
MRPL40
HIRA
TRMT2A
RANBP1
GLRA1
TUFM
SH2B1
KCNH7
CPT1A
SEPTIN9
SEPTIN5
CALM1
EDARADD
KANSL3
FER1L5
SLC6A9
ZC3H12A
ZNF22
THEM4
ERRFI1
NCOA3
CTSA
RALGDS
AGPS
ATXN7L2
RTBDN
SDC4
NEURL2
FBF1
LMO7
FHL2
BRIX1
TTC12
PPP1R3E
USP32
NR2F6
RRP8
ILK
EPS15
DGAT1
CCNL1
MYL12B
SSH1
CCNI
KTN1
ADGRG1
RNF130
ZSWIM7
TTC19
GRHL3
C15orf39
ARL6IP4
RARA
NTAN1
TSPAN10
NPLOC4
MTX2
TACC1
BDH1
INAVA
STX1A
EPHA10
ZNF697
ATP6V1G1
GCLM
CDH15
ADK
NDUFAF6
FAM107B
HOXD12
KIF13A
L1CAM
TTC38
WWC2
OSGIN1
UAP1L1
H6PD
NCOA5
SCT
CDHR5
ARL5A
PCK2
MLLT6
DIP2A
ARL8B
TSKU
MTRNR2L9
PRMT3
NCKAP1
AXDND1
ZP3
ZNF367
CMIP
OSBPL6
MAPKAPK3
CISH
GP1BB
TBL1XR1
ANKRD46
TRIB3
THUMPD1
RHBDD1
LYL1
DPY19L4
TRDMT1
SAMD11
OPRL1
LKAAEAR1
OBSL1
INHA
ODC1
TSPAN12
DCK
ANXA8
SULT1A4
SULT1A3
H3-3A
ESRP2
EPHX1
SLC25A45
FRMD8
HEY1
ACSL3
CLTB
MAF1
DHRS13
TMTC4
RNF11
NCS1
NUB1
MKNK2
FST
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
BARHL1
SYNRG
DNAJB12
NBPF1
FASN
ITGAE
SLC6A12
TRIOBP
RAPH1
LRP5
NUF2
IL1R1
CBFA2T2
CARHSP1
APOC1
ST3GAL2
NARF
SRF
NCOA4
ERBB3
TBC1D5
DNAJB3
EPB41L1
IRF2BP2
PHLDB2
SMIM17
CALCOCO2
MAPK13
DDIT4
ZKSCAN2
PHF19
USP9X
SMARCD2
CDKN1A
CPPED1
BUD13
GATAD2B
DRC7
RAB37
SSNA1
ANAPC2
SERINC2
BPTF
KCTD18
AGAP3
ZNRF2
RILP
POLD1
ARHGEF28
HES1
APBA2
SPATA1
GNG5
PTPDC1
ACSL1
ZNRF3
BICD1
SLC49A3
TEN1
ACOX1
OSGIN2
RASAL2
TANGO2
MAML3
GMEB2
SEC31A
BAIAP2
ANKRD28
WDR97
DENND4B
AXL
WEE1
UBE2K
ZBTB4
SLC35G6
POLR2A
SPATA20
IL13RA1
FLOT2
IKZF5
ACADSB
ATF3
PIM3
KMT2A
PAQR8
DMTF1
UBE2D2
RTEL1
DPP9
RGS19
SEPHS2
PPP1R3C
CDK3
TMEM86A
KLHL5
ESCO1
PPP1CB
KLHL12
SMARCD3
PET117
KIFC3
KAT14
SF3A2
PLEKHJ1
CX3CL1
PGRMC2
NOL4L
FRA10AC1
CYB5R4
PARL
TBC1D13
SMURF2
HNRNPUL1
CNNM3
AHCY
PPP1R12B
PXT1
KLF4
KCTD20
MIS18BP1
ZNF101
ATP13A1
SLC25A32
DCAF13
LANCL2
DEGS1
FBXO4
ZFAT
TIGD2
KANK2
GET4
CRLS1
ANKLE2
FGFR4
ASPSCR1
IST1
MOB1B
RDX
TOLLIP
PLAGL1
WTAP
SOD2
MAPK1
MIA2
TARS1
SLC39A3
DCAF11
CTCF
TMEM41B
RICTOR
POLD4
PKP4
NR1D1
CCDC148
NIPSNAP2
RNF166
ENOSF1
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR36
COL16A1
ITGB1
CXXC5
TLCD4-RWDD3
TLCD4
NKD1
ATP7A
DNAJB1
USP22
SH3BP4
MRPL44
PHACTR4
MEMO1
DCAF10
KMT2C
GBA
PEBP1
PPP5D1
NUP107
CALM3
LOC100130520
FOXK2
CD300H
RAB17
TMEM87B
HEATR1
SGK1
NDUFA4
ZNFX1
FASTKD1
RAN
HSD17B8
SLC29A1
UPP1
SYNJ2
DISP1
KMT5B
PICALM
DCDC2
TTC3
DNAH14
MAMSTR
ETV4
SFT2D2
FAM102B
GIPC1
TCF12
NPIPB6
METTL9
SLC35E2B
LASP1
GCFC2
ARFGAP2
C16orf87
MCM7
LOC102724265
AP4M1
DSTYK
PAFAH1B1
TCAF1
ICE2
DHX40
ABCC6
STX18
USP47
MIF4GD
IL21R
ATP5MPL
HEXB
USP30
ZNF354A
RIPOR3
LDLR
DEAF1
BCL7B
SOWAHC
SEPTIN10
BCR
NAMPT
RAB43
RUNX1
PDCL3
MEFV
BCAP29
ZNF641
VMO1
GLTPD2
CSRNP1
RNF139
CEP135
CRKL
CLK3
ADGRG3
AFF4
IKZF3
CDKN2AIP
ABCB10
THAP12
GVQW3
AHDC1
ZBTB40
TPM1
YTHDF1
CST3
ZNF76
NDUFS7
ARSB
ABLIM1
SAPCD2
IMPDH2
SNX18
FKBP9
KIAA0232
ZC2HC1C
TCTEX1D4
PHF3
BTBD19
ACYP1
UBN2
NAT8
ANGPTL8
GTDC1
NUDCD3
CCL20
TPD52
SLC1A4
TEAD4
LEPROTL1
LAPTM5
TIPARP
PRC1
GAB1
PPFIBP2
DLGAP3
CHGB
SPINK1
MRRF
RGPD1