ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX16499855 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◣ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

NPAS4
WDR74
NKX1-1
XKR7
HTR5A
FAM24A
IQSEC3
HDX
TAS1R3
INSM2
MTRNR2L1
DUX4
FRG2C
RTBDN
RAB37
ENOSF1
SMIM17
LIN28A
SNAP25
CPLX2
MUC3A
EPHA10
ATL3
KCNH7
FRG2
MAPK8IP2
CELSR3
GLRA1
GIT1
ANKRD13B
L1CAM
SNX16
VPS29
RAD9B
LHFPL4
NEFH
SST
BARHL1
CCDC200
DLGAP3
ZFR2
OSGIN1
PRLHR
HPCA
NTSR2
LEMD3
MARCHF4
COL23A1
CPNE9
CELF6
DHX40
OPRM1
PPY
ST8SIA3
CYB5R4
ZFYVE27
NEUROD4
SNTG1
WDR36
RANBP3
SLC12A5
TRIM44
ANK1
SP5
SHISAL2A
CEP295
PRKAB2
CHD1L
SLC39A3
GPR26
CYP2R1
EVI5
UPB1
RESP18
CDK5R2
NPPB
PTP4A2
HES6
RHBDD1
FBXL16
SRRM3
PTPRS
STOX2
ZNF75A
TIGD7
ASIC3
KCNH6
ABCA3
PDE4C
CHRM4
SCGN
HHIPL1
CCDC85C
KCNH4
HCRT
STK25
COPS8
PCNA
ZCCHC7
ZNHIT3
RTN2
PPM1N
ZNF354C
TMEM179
GPR78
TASOR2
HES3
KCNK12
GRIA2
KCNC1
CEMIP
UNC80
DYRK4
LCLAT1
CADPS
CYP1B1
ASCL2
PRMT8
ZNF416
ZIK1
NOC3L
SIGLEC10
ALK
ZNF280D
NMNAT2
CPQ
SCRT1
LAMP1
E2F6
HS3ST2
CTDSPL
CBY3
CCDC92B
IKZF3
ZPBP2
KDM3A
USP30
SVOP
GPR6
TNXB
SLC35F4
CHGB
CHRNB2
NRXN1
GCK
CDC16
MYL7
ARFGAP3
KCNB1
FZD9
RFC1
PCSK1
TEX45
BMP4
PUS3
DDX25
OGDHL
H4C3
H1-6
NEUROD1
SLC7A14
MANEAL
XKR4
TMEM268
LINGO1
SOX30
ZCWPW1
MEPCE
CACNG3
MARCHF11
PRUNE2
TACSTD2
TSEN54
CASKIN2
USP14
LMLN2
SKA3
MRPL57
B3GALNT1
VGF
DIABLO
UCN
CD8A
PKDREJ
ODC1
ANKHD1-EIF4EBP3
ANKHD1
VSTM2B
FCMR
VWC2L
UGT8
SLC34A2
GABRG2
KLHL35
PMEPA1
NEK3
ANKLE2
ACTL6B
CARTPT
ACTA1
NEXMIF
TMEM185B
GJA10
PTPRN
TRIM59
UTP11
SFRP4
EPDR1
DLL3
COPS7A
CACNA1B
GET4
SRP19
CD163L1
TPH2
RASL10A
RAX
CPD
RNF130
H4C9
STMN3
RTEL1
TLL1
HNRNPR
CABP7
TEX30
NPDC1
MAPK8
CDIP1
GUCY1A2
GFI1
SEZ6L
TMEM107
HBQ1
HBA1
RAB11FIP4
FAM221A
MFAP3L
EFHD1
MYT1
PLCH2
MLLT11
CDC42SE1
LHFPL5
ZBTB32
TUBB3
CRH
PCP2
STXBP2
CACNG2
EPN1
EIF2B3
EIF5A2
SMC1B
RIBC2
FAM163B
TUBGCP3
ANKLE1
ADCY4
SYT5
CALM1
RNF32
KLF9
TASOR
LACC1
CCDC122
NCAN
NKX2-4
H4C11
RRP1B
HSF2BP
GDAP1L1
MCM6
TDRD5
GRM6
FBRS
ZNF564
RAP1GAP
GABRD
SLC6A5
DRD2
BICDL1
MIPOL1
MSH5
CLIC1
KCNS1
CD37
PRLH
LRIT2
E2F3
H2BC8
H2AC8
OXT
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PGRMC2
TK2
CKLF-CMTM1
CKLF
STAG3
GPC2
H3C6
ZNF664-RFLNA
ZNF664
CCDC92
EGR4
C10orf88
CPNE4
SWSAP1
ZNF239
PPP1R3C
HDAC2
DCHS2
GPR158
TREM2
PSMD7
CHGA
AK2
MEX3D
LHFPL3
SPHK1
ATP6V1B2
AIP
XKR9
LACTB2
TMEM121B
IRAK3
H1-2
SMPD3
ATP2A1
TBX10
H4C12
FOXRED2
C3orf14
GSX1
POLDIP3
MTHFD2
ISM1
FAM111A
RPH3A
JMJD1C
ADNP
DUT
NTM
BCL2L10
EXD1
CHP1
MRPS36
GDAP1
MMP24
CERS6
H4C6
KCNJ9
PLLP
CCDC71L
H4C2
H3C2
H2AC4
KHSRP
PRKAR1B
SCAMP5
GALNT9
GABRB3
PGBD2
ARHGAP45
ZNF566
GRM1
NME6
ANKRD34C
FAM184B
RXFP3
CTNNB1
H4C8
HNRNPH1
SLC25A13
DNMT3A
HDAC4
FAM185A
MKLN1
TMED1
TBC1D30
DNER
SIRT4
COA7
GPR88
LMCD1
PMS2
AIMP2
CCDC126
STEAP1B
EPM2A
DNAJC6
EGR2
RASSF10
GTF2H2C_2
GTF2H2C
ZNF148
ZC3H6
H4C14
SRSF7
EDRF1
ARL17B
ARL17A
USPL1
HMGB1
GCFC2
GTF2IRD2
GTF2IRD2B
SEZ6L2
ASPHD1
NOP14
GRK4
GLS2
ZSWIM7
TTC19
PRCC
AKR1E2
H4C15
MLF1
SPDYA
SYNGR3
PAQR4
KREMEN2
SIMC1
ICE2
PYURF
PIGY
HERC3
PDE1C
SCG3
CNTLN
TNFRSF9
PGBD5
CAPRIN1
LRRC8B
RPS6
UBE2I
SLC16A8
DNAH14
TARS3
CETN3
MUC2
ASCL4
AGPS
H3C13
H2BC18
GTF3A
ZNF131
YIF1A
TMEM151A
ACSS1
IPMK
CISD1
N4BP2
RAB4A
PTDSS1
MTERF3
LAP3
KPNB1
THUMPD3
RPL31
THOC3
TMEM186
PMM2
CCND2
MRRF
SLC6A11
H2BC4
H2AC6
RPL27A
GORASP2
PPP1R3D
FAM217B
TBC1D15
KCNT2
SEH1L
AGBL3
ZDHHC17
TOMM5
TCHH
U2SURP
FJX1
GDA
ORC2
CCL28
AVPR1A
PIK3R3
ESYT3
ACBD6
SYT14
CDCA7
RPL21
ANKRD18B
PIP5KL1
TEFM
TTI2
EFCAB13
EIF1
PPIA
RSU1
H2BC12
H2AC12
ZNF454
SLITRK1
TRDMT1
CBR1
EPB41L5
DCP1B
LRRC58
PUM2
ANKRD36B
TMEM18
CHEK1
FBXW4
GPR150
VENTX
FBXL13
ARMC10
PTPDC1
FZD4
EPCAM
GRIN1
CFDP1
ERMARD
CCNC
MPHOSPH6
PCDH8
SP8
EXOSC6
OR1E2
VSX1
XK
NUDT15
RPP25
PSAT1
PM20D2
MSL2
ZFP62
POLE4
BCAT2
ZNF441
NT5C
CCDC146
CTDP1
PTGER4
ARHGEF5
HENMT1
IREB2
H2BC5
H1-4
RBM25
PBX3
GRID2
ADRB1
ERRFI1
DDX1
DIO3
ZSCAN31
TXNDC15
USP4
MTF2
SECISBP2
LUC7L
HNF4G
UBFD1
EARS2
MOB4
H2BC15
H2AC15
RBM43
H3C11
NXPH2
H4C13
GMCL1
POLR3E
CYP2U1
ATF4
RCOR3
SKIL
ARID3B
MTRNR2L2
MSH3
DHFR
ID2
ERCC1
SIRT1
MTIF2
SMAD7
TMEM95
KCTD11
FDXACB1
C11orf1
RBPJ
OLFM2
SERPINE1
DNAJB2
STAM2
PPP6R1
RNF103
ID3
TRIB1
PPP1R13L
POLR1G
ID1
LPCAT3
BIRC7
GIP
FZD5
GNB2
BMPR2
LRP12
FSTL3
MTRNR2L8
GSDMD
SMAD3
KLF10
NOS3
DHRS3
F2
LAPTM4B
UAP1
KDM6B
HOXA3
SLC7A5
EXOC2
H4C4
NDUFAB1
CCDC88A
EP400
ATAD2
MARCHF3
ZNF341
LRRC37A3
TMEM9
CLDN14
UBE2F
MRPL2
KLC4
MTHFD1L
PDLIM7
ZBTB45
RCL1
NTMT1
REV1
VDAC2
GLIPR1L1
CAPS2
H2BC6
RNF213
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
TUBB
MDC1
USP42
CLTC
TBC1D1
PLEC
COL7A1
DRAP1
C11orf68
CALM2
RHOQ
ATP6V1E2
TGIF1
SLC7A6
TMEM222
BRWD1
MMP20
OPLAH
BRPF1
LIMS1
CAT
ACVR1
LRP6
MDM2
TRIM48
SPIN1
BCAP31
ABCD1
MRPL38
LRRC61
DUSP1
SLC44A1
CFLAR
FCRLA
AIFM2
SLC9A1
ADAM17
JRK
LMNA
PGLYRP4
SPACA6
PLK3
PLEKHA7
H2AZ2
RBFOX2
P2RX6
HPN
TEX46
ZNF718
DGAT2
PLEKHF2
ZNF595
SREBF1
HERPUD2
LURAP1L
TBC1D14
RWDD1
PLOD2
STK11
GPC6
TNFRSF12A
CLDN6
RGS3
SPATA9
RHOBTB3
KDM1A
CCNL2
MFSD10
GZF1
GPT2
PIK3IP1
OTUD7B
ETFB
CANT1
MAN1A2
BAMBI
ITPK1
FURIN
SNX14
LARS2
NHLRC1
THOC6
PIM1
HCFC1R1
PHETA1
ST6GALNAC6
NDE1
MARF1
ZFAND2A
NRL
BHLHE40
NOTCH2
CCPG1
C15orf65
TAGLN2
SH2D6
TNIP1
ARL6IP1
SMAP1
PIK3R1
ARFGEF2
NFKBIA
PSPN
ALKBH7
SERPIND1
MAP3K4
KANK1
TLE1
RNF19A
MACC1
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
SKI
CFL1
KRAS
PRAME
MET
SLC39A7
RXRB
PUF60
WDFY1
ADAP1
INHBE
IER3
FLOT1
UBE2B
CDKL3
SQSTM1
CDK19
AMD1
BCKDK
S100P
ANKS4B
HIBADH
TRAF7
THAP11
NUTF2
CENPT
RNF144A
SPATA25
SYNPO
CYP26A1
C3orf86
HPCAL1
RFX1
ASIC1
TMC7
ZBTB38
NR4A1
KDM7A
CTSL
LOC100287896
LIPT2
NEU1
LRP5L
SLC39A13
CDK5RAP2
XRRA1
SPCS2
CCL16
SMIM11B
SMIM11A
ARL4A
RNFT1
NDST1
SLC20A1
GNL2
TUBG1
RETREG3
KBTBD2
NODAL
MARCHF7
SSBP2
FOXJ3
ASB2
SARAF
LZTR1
SERPINB6
MRPL40
HIRA
ITGAV
TRMT2A
RANBP1
TUFM
SH2B1
CPT1A
KMT2E
SEPTIN9
SEPTIN5
EDARADD
KANSL3
FER1L5
SLC6A9
ZC3H12A
ZNF22
THEM4
NCOA3
CTSA
RALGDS
ATXN7L2
SDC4
NEURL2
FBF1
LMO7
FHL2
BRIX1
TTC12
PPP1R3E
USP32
NR2F6
RRP8
ILK
EPS15
DGAT1
CCNL1
MYL12B
SSH1
CCNI
KTN1
ADGRG1
NDRG1
GRHL3
C15orf39
ARL6IP4
RARA
NTAN1
TSPAN10
NPLOC4
MTX2
TACC1
BDH1
INAVA
STX1A
H4C5
ZNF697
ATP6V1G1
GCLM
CDH15
ADK
NDUFAF6
FAM107B
HOXD12
KIF13A
TTC38
WWC2
UAP1L1
H6PD
NCOA5
SCT
CDHR5
ARL5A
PCK2
MLLT6
DIP2A
ARL8B
TSKU
MTRNR2L9
PRMT3
NCKAP1
AXDND1
ZP3
ZNF367
CMIP
OSBPL6
MAPKAPK3
CISH
GP1BB
TBL1XR1
SLC16A1
ANKRD46
TRIB3
THUMPD1
CCN2
LYL1
DPY19L4
SAMD11
OPRL1
LKAAEAR1
OBSL1
INHA
TSPAN12
DCK
ANXA8
SULT1A4
SULT1A3
H3-3A
ESRP2
EPHX1
SLC25A45
FRMD8
HEY1
ACSL3
CLTB
MAF1
DHRS13
TMTC4
RNF11
NCS1
NUB1
MKNK2
FST
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
SYNRG
DNAJB12
NBPF1
FASN
ITGAE
SLC6A12
TRIOBP
RAPH1
LRP5
NUF2
IL1R1
CBFA2T2
CARHSP1
APOC1
ST3GAL2
NARF
DNAJB5
SRF
NCOA4
ERBB3
TBC1D5
DNAJB3
EPB41L1
IRF2BP2
PHLDB2
CALCOCO2
MAPK13
DDIT4
ZKSCAN2
PHF19
USP9X