ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

ROR2
GID4
ATPAF2
SLC7A5
HDGF
SSBP3
FGF17
SMARCD3
CEP55
TSKU
PMEPA1
PITX2
ELAPOR2
AGFG2
APC
USP2
PLK3
MINDY3
ZNF792
EPG5
FXYD6-FXYD2
FXYD6
ARMC7
CFLAR
LEFTY1
EPSTI1
SLC36A2
GPR183
ACSS3
LRTM1
KCNF1
ETFB
ACOX3
BCL11B
MYOM1
SLC1A1
LEFTY2
UQCRHL
CSRNP1
ID3
C2orf81
WDR54
ZNF664-RFLNA
ZNF664
CCDC92
C2orf74
DACT2
CER1
NODAL
TOMM20
ALOX5AP
IGF1R
ID1
LAPTM4B
NEURL1B
MTRNR2L8
RAB33A
AKAP13
SLC5A3
MRPS6
TMEM272
MTRNR2L2
MSH3
DHFR
TP53TG5
SPOCK3
ARHGEF4
ANKDD1A
NPFFR2
ZNF558
WDR74
NTN1
ZAP70
DGAT2
ANGPT2
TTF1
CFAP77
MYT1
ADGRF2
TTC39B
HOXD13
EVX2
RAB17
CST6
RAI1
ARHGAP9
MARS1
TMEM185A
FOXI1
MTRNR2L1
LBR
CDHR3
COPS8
ATP6V1B2
CELA3B
SPDYE14
SPDYE10P
ZNF296
GEMIN7
SEMA3E
DECR1
GRSF1
AGPAT3
PAX4
SLC6A1
FOXN4
PIP5K1B
ALK
PRR5L
DUSP5
ROR1
MIXL1
NBL1
TDGF1
SACM1L
ARF1
SMAD3
PLPP4
MRPL22
GEMIN5
ZNF587B
TCEA2
GNA13
SOX18
UBA1
RXRG
GPR19
ID2
DNAJB2
FLVCR2
CELA3A
TVP23B
DUS2
DDX28
DPEP2NB
PLAGL1
RNF19A
SLC26A7
ASIC1
APOL3
LPGAT1
TLE2
PKHD1L1
HABP2
PAQR9
TBC1D14
CYTH1
BRD7
CUEDC1
IL17RA
ARID5B
CKM
GCNT1
MDN1
RUNX1T1
CAV1
H2BW2
SMAD2
CFAP410
SUOX
LGR5
SMYD3
DET1
IL17RD
ADPGK
NANP
ACSM4
IFIT3
HOXA2
HNRNPD
ZBTB18
TRIM48
RRBP1
TRMT112
PRDX5
PRND
DDR2
AASDH
SLC34A2
S100A10
CD8A
ADAMTS18
VIPR2
ALG14
DENND2B
AKIP1
FGF5
FGF1
POU2F3
MAMDC2
WDR25
WARS1
UBAP2
MTRNR2L6
MECOM
IRF2BP1
APOBEC3D
MSMB
GPSM3
PBX2
SPACA3
CASTOR2
TEN1
ACOX1
BLOC1S6
ITGB6
PHLDB2
MYCL
RBP5
TRIP10
GPR108
CLSTN3
CFC1
FGFR4
BDH1
USP53
ZNF732
GPT2
APOBEC3F
HNF4A
SLC24A2
CHL1
CCDC60
EPB41L4A
SH3BGR
SALL4
APOBEC3G
KIT
ANKFN1
AIRE
NRL
PCK2
NAA60
PPP1R21
ARHGAP28
SNX18
STK40
UNC50
COA5
NPM3
FGF8
RPRM
RADIL
TBCA
AFF3
IGFBPL1
STK33
SKAP1
ABCB11
FOXO3
SFXN1
MYC
GREM2
TBX3
GPR37
GJB5
STAG1
ANKFY1
PIPOX
OCLN
CCDC192
NUF2
EHHADH
BAG3
DDT
ZIC2
GSTT2B
GSTT2
CCDC200
SBF1
TP53INP1
BOD1L2
AGPS
CTF1
BCL7C
DIAPH3
ZNF610
CCNG1
SERINC3
PTAFR
SFRP1
ATL2
HRK
UACA
LIFR
FBXO34
KRAS
SMIM8
ACHE
ARHGEF2
HACD2
SOAT1
PHC2
ZBTB25
ZBTB1
SLAMF1
SLC37A4
PARL
CHD2
CEBPB
DTNB
GNG10
SOWAHC
SEPTIN10
GAS2L1
LOXL4
CELF1
IL12B
TIAM1
WIPI1
PTGR1
ABLIM1
MAGI3
ZSCAN22
LRIG3
TMEM14B
ELMO1
ADGB
ATF3
CPE
SYNPO2L
CROCC2
VDAC1
ERGIC1
CRYGB
TNC
ADM
FGFR2
MTRNR2L9
ZSWIM3
ACOT8
FDXACB1
C11orf1
MACC1
TMCC3
PKP4
CCDC148
DST
SNTB1
SCOC
ZNF540
METTL11B
ZNF148
TPM1
ACOXL
TVP23C
FBRS
MYO16
CFC1B
CCDC182
RTL10
GNB1L
MYSM1
TRIM2
PLCG2
ADAMTS8
IVNS1ABP
SUCLG1
NDUFB7
PGPEP1
FZD8
GSTA1
LOC107986453
PELI1
GSC
TMEM14A
SPACA6
MSX2
NDST4
HNRNPA2B1
CBX3
MATN3
UNC80
C5orf63
DICER1
GUCA2A
JAM2
GBP4
ENPEP
STAM2
RNF130
SLC43A3
DDX58
SELENOT
CLTA
FAM83F
RAD54L2
EPHB3
TFRC
RNF208
TRIB1
ENTPD4
SMAP2
LHX1
NEDD4L
UNC45B
RDH13
CHIA
ZNF438
PRAG1
TIPARP
SGK3
CDH8
DAAM1
PRDM1
RGS5
CRTAM
SLITRK2
CYP2A6
SETBP1
PLAUR
ZNF76
KLHL4
PTPRD
SLC25A51
MYBPH
GRM3
GLRA3
RASSF10
PKDCC
SKIL
PRKAB2
CHD1L
DUX4
ARID3B
NPAS4
FRG2C
ERCC1
SIRT1
MTIF2
MLLT11
CDC42SE1
SMAD7
MUC3A
TMEM95
KCTD11
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
XKR7
RBPJ
OLFM2
SERPINE1
PPP6R1
RNF103
PPP1R13L
POLR1G
IQSEC3
JMJD1C
LPCAT3
MIPOL1
HTR5A
BIRC7
NKX1-1
GIP
FZD5
GNB2
BMPR2
LRP12
FSTL3
GSDMD
KLF10
NOS3
DHRS3
F2
UAP1
KDM6B
FRG2
FAM24A
HOXA3
EXOC2
H4C4
NDUFAB1
CCDC88A
EP400
ATAD2
MARCHF3
ZNF341
LRRC37A3
TMEM9
LIN28A
CLDN14
INSM2
UBE2F
RCOR3
MRPL2
KLC4
MTHFD1L
PDLIM7
ZBTB45
RCL1
NTMT1
REV1
VDAC2
GLIPR1L1
CAPS2
H2BC6
RNF213
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
TUBB
MDC1
USP42
CLTC
TBC1D1
SNX16
PLEC
COL7A1
DRAP1
C11orf68
CALM2
RHOQ
ATP6V1E2
TGIF1
CPLX2
SLC7A6
TMEM222
BRWD1
MMP20
OPLAH
BRPF1
LIMS1
CAT
ACVR1
LRP6
MDM2
SPIN1
BCAP31
ABCD1
MRPL38
LRRC61
DUSP1
SLC44A1
FCRLA
AIFM2
SLC9A1
ADAM17
JRK
LMNA
PGLYRP4
PLEKHA7
H2AZ2
RBFOX2
P2RX6
FBXL13
ARMC10
HPN
TEX46
ZNF718
TRIM44
PLEKHF2
ZNF595
SREBF1
HERPUD2
LURAP1L
RWDD1
PLOD2
STK11
GPC6
TNFRSF12A
CLDN6
RGS3
LEMD3
SPATA9
RHOBTB3
KDM1A
CCNL2
MFSD10
GZF1
E2F3
PIK3IP1
OTUD7B
CANT1
MAN1A2
BAMBI
CELSR3
ITPK1
FURIN
CTNNB1
SNX14
LARS2
ZC3H6
NHLRC1
THOC6
PIM1
HCFC1R1
PHETA1
ST6GALNAC6
NDE1
MARF1
ZFAND2A
BHLHE40
NOTCH2
CCPG1
C15orf65
TAGLN2
SH2D6
TMEM268
HNRNPR
TNIP1
ARL6IP1
USPL1
SMAP1
HMGB1
PIK3R1
ARFGEF2
NFKBIA
PSPN
ALKBH7
SERPIND1
MAP3K4
KANK1
TLE1
MOB4
ACACA
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
STMN3
SKI
CFL1
PRAME
MET
SLC39A7
RXRB
PUF60
WDFY1
TEX45
ADAP1
INHBE
IER3
FLOT1
UBE2B
CDKL3
SQSTM1
CDK19
AMD1
BCKDK
S100P
ANKS4B
HIBADH
TRAF7
THAP11
NUTF2
CENPT
RNF144A
SPATA25
SYNPO
CYP26A1
C3orf86
HPCAL1
RFX1
TMC7
ZBTB38
NR4A1
KDM7A
CTSL
LOC100287896
LIPT2
NEU1
LRP5L
SLC39A13
CDK5RAP2
XRRA1
SPCS2
PKDREJ
CCL16
SMIM11B
SMIM11A
ARL4A
RNFT1
NDST1
SLC20A1
GNL2
TUBG1
RETREG3
KBTBD2
MTF2
MARCHF7
SSBP2
FOXJ3
ASB2
SARAF
LZTR1
SERPINB6
MRPL40
HIRA
ITGAV
TRMT2A
RANBP1
GLRA1
TUFM
SH2B1
KCNH7
CPT1A
KMT2E
SEPTIN9
SEPTIN5
CALM1
EDARADD
KANSL3
FER1L5
SLC6A9
ZC3H12A
ZNF22
THEM4
ERRFI1
NCOA3
CTSA
RALGDS
ATXN7L2
RTBDN
SDC4
NEURL2
FBF1
LMO7
FHL2
BRIX1
TTC12
PPP1R3E
USP32
NR2F6
RRP8
ILK
EPS15
DGAT1
CCNL1
MYL12B
SSH1
CCNI
KTN1
ADGRG1
NDRG1
ZSWIM7
TTC19
GRHL3
C15orf39
ARL6IP4
RARA
NTAN1
TSPAN10
NPLOC4
MTX2
TACC1
INAVA
STX1A
EPHA10
H4C5
ZNF697
ATP6V1G1
GCLM
CDH15
ADK
NDUFAF6
FAM107B
HOXD12
KIF13A
L1CAM
TTC38
WWC2
OSGIN1
UAP1L1
H6PD
NCOA5
SCT
CDHR5
ARL5A
MLLT6
DIP2A
ARL8B
PRMT3
H4C12
NCKAP1
AXDND1
ZP3
ZNF367
CMIP
OSBPL6
MAPKAPK3
CISH
GP1BB
TBL1XR1
SLC16A1
ANKRD46
TRIB3
THUMPD1
RHBDD1
CCN2
LYL1
DPY19L4
TRDMT1
SAMD11
OPRL1
LKAAEAR1
OBSL1
INHA
ODC1
TSPAN12
DCK
ANXA8
SULT1A4
SULT1A3
H3-3A
ESRP2
EPHX1
SLC25A45
FRMD8
HEY1
ACSL3
CLTB
MAF1
DHRS13
TMTC4
RNF11
NCS1
NUB1
MKNK2
FST
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
BARHL1
SYNRG
DNAJB12
NBPF1
FASN
ITGAE
SLC6A12
TRIOBP
RAPH1
LRP5
IL1R1
CBFA2T2
CARHSP1
APOC1
ST3GAL2
NARF
DNAJB5
SRF
NCOA4
ERBB3
TBC1D5
DNAJB3
EPB41L1
IRF2BP2
SMIM17
CALCOCO2
MAPK13
DDIT4
ZKSCAN2
PHF19
USP9X
SMARCD2
CDKN1A
CPPED1
FAM168B
BUD13
GATAD2B
DRC7
H4C11
RAB37
SSNA1
ANAPC2
SERINC2
BPTF
KCTD18
AGAP3
ZNRF2
RILP
POLD1
ARHGEF28
HES1
APBA2
SPATA1
GNG5
PTPDC1
ACSL1
ZNRF3
BICD1
SLC49A3
OSGIN2
RASAL2
TANGO2
MAML3
GMEB2
SEC31A
PIK3R3
BAIAP2
ANKRD28
WDR97
DENND4B
AXL
WEE1
UBE2K
ZBTB4
SLC35G6
POLR2A
SPATA20
IL13RA1
FLOT2
IKZF5
ACADSB
PIM3
KMT2A
PAQR8
DMTF1
UBE2D2
RTEL1
DPP9
RGS19
SEPHS2
PPP1R3C
CDK3
TMEM86A
KLHL5
ESCO1
PPP1CB
KLHL12
PET117
KIFC3
KAT14
SF3A2
PLEKHJ1
CX3CL1
PGRMC2
SECISBP2
NOL4L
FRA10AC1
CYB5R4
TBC1D13
SMURF2
HNRNPUL1
CNNM3
AHCY
PPP1R12B
PXT1
KLF4
KCTD20
MIS18BP1
ZNF101
ATP13A1
SLC25A32
DCAF13
LANCL2
DEGS1
FBXO4
ZFAT
TIGD2
KANK2
GET4
CRLS1
ANKLE2
ASPSCR1
IST1
MOB1B
RDX
TOLLIP
WTAP
SOD2
MAPK1
MIA2
TARS1
SLC39A3
DCAF11
CTCF
TMEM41B
RICTOR
POLD4
NR1D1
NIPSNAP2
RNF166
ENOSF1
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR36
COL16A1
TMEM242
ITGB1
CXXC5
TLCD4-RWDD3
TLCD4
NKD1
H4C14
ATP7A
DNAJB1
USP22