ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702098 | hESC HUES64
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX11033162: 786-O

◢ SRX11033163: 786-O

◢ SRX8512847: HCT 116

◢ SRX8512848: HCT 116

◢ SRX8512849: HCT 116

◢ SRX8512850: HCT 116

◢ SRX8512851: HCT 116

◢ SRX8512852: HCT 116

◢ SRX8512853: HCT 116

◢ SRX8512854: HCT 116

◢ SRX8512855: HCT 116

◢ SRX2636342: Hep G2

◢ SRX2636343: Hep G2

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◣ SRX702098: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX16499855: iPS cells

◢ SRX16499856: iPS cells

◢ SRX10976443: K-562

◢ SRX10976444: K-562

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
ZNF148
PRKAB2
CHD1L
MTIF2
SNX16
ZNF664-RFLNA
ZNF664
CCDC92
SKIL
AGO1
COPS8
ID1
OLFM2
USPL1
HMGB1
MUC3A
LEMD3
SNX18
SMAD7
BMPR2
HNRNPR
STOX2
ID3
HERPUD2
ZNF655
METTL2A
ID2
FDXACB1
C11orf1
CD8A
RUSC2
SCAF11
HABP4
SPACA6
NUF2
PDE4DIP
FBRS
BCAP31
ABCD1
SOWAHC
SEPTIN10
WIPF2
UAP1
EP400
PITX2
MIPOL1
CCDC88A
CAMK2D
JMJD1C
STAM2
TRIOBP
PRKACB
RWDD1
DGAT2
ZBTB45
PAFAH1B1
USP47
SLC7A5
SLC2A8
CDK5RAP2
SLAIN2
BAMBI
GNL2
ZFY
RAPH1
DEGS1
LRRC37A3
TUBB
MDC1
ZSWIM7
TTC19
RARA
WWC2
UNK
H3-3B
NCOA3
BBS12
EXOC2
EI24
OCA2
GTF2A1
RUNX1T1
SSBP2
KTN1
EIF4A2
PIGH
DRAP1
C11orf68
KRAS
CCN2
MTHFD1L
ATXN10
ELMOD2
MARCHF5
CPEB3
SNX14
XKR7
SARAF
NPM3
FGF8
USP22
METTL2B
H4C11
ZBTB4
SLC35G6
POLR2A
MBD4
IFT122
ANKRD46
NOTCH3
ZNF48
DCP1B
PPP1R13L
POLR1G
CCDC200
ORC2
HEATR1
ACSL3
RNF11
RFT1
RPS8
SMAP1
CHD2
ZNF697
REEP5
GGH
SCLT1
C4orf33
NAV2
CGB3
LHB
SH2B2
MAP3K4
LEFTY2
TEAD1
HIF1A
SLC38A2
KLF10
SRF
SREBF1
MRPL44
CKAP2
VPS36
TAB2
NRAS
LPCAT3
UBN2
RSU1
ACACA
PRC1
PPP2R2A
HNRNPC
EFR3B
TAPT1
LEPROTL1
ZBTB20
MED23
TBL2
ESRP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
UBE2B
CDKL3
ARL4A
GPR180
FRA10AC1
AVEN
TUFM
SH2B1
FBXW7
FRMPD1
ZNF354A
SLC6A15
ZNF846
TEX9
SRSF6
ZFAND5
VKORC1L1
ST20-MTHFS
DNAJC3
UBE2S
NODAL
RRP8
ILK
MTX2
HECTD1
B3GLCT
POLI
BFSP1
FRG2C
GLIPR1L1
CAPS2
LARS2
BICD1
UBE2D2
FRMD6
SEC22B
ARMH4
CTNNB1
NUB1
SETD5
RNF32
MSANTD4
UBE2K
PMAIP1
FXR1
TGFA
APTX
DNAJA1
ZCCHC10
RASGEF1B
TCF12
MEF2D
PRSS47
SLC44A1
SLC25A32
DCAF13
SMAD9
BCKDHB
GNB2
MOB4
RBMS1
SLC9A1
TTC3
PIGP
PDE7A
MAP7
TSC22D1
AKT3
FILIP1L
TRPM3
HECTD2
C5orf49
SERPING1
LRP12
PLK3
ZNF654
CGGBP1
MINPP1
CEP112
ADAMTS18
UBE2F
DYRK3
PMF1-BGLAP
PMF1
TNPO1
PJA2
PLAAT1
SYDE2
PGBD1
RBSN
RB1CC1
CPLX2
TNRC6A
CABIN1
FAM76A
CREM
MRPS31
ARL14EP
SDHA
CCDC127
APMAP
MAPK6
INKA2
DDX20
STYX
FAM177A1
CAMSAP2
ATP2C1
RPS3A
PROM1
TRDMT1
FKBP5
ASCC3
RPLP0
TMEM222
GATAD2B
GTF2H2
CPSF6
MAP4
SLC9A5
FHOD1
SIRT1
LRP6
TBC1D5
IKZF3
GAB1
AFF1
METTL25
CCDC59
MAP2K3
ZPBP2
CALM1
PDIA3
KPNA5
POU5F1
AFG3L2
TBPL1
MAPK1IP1L
INTS10
F11R
PHIP
EED
PARVA
ZDHHC20
ADAR
U2AF1L5
U2AF1
UPF3A
NRSN1
UBR4
SOS2
CDC42EP3
KCNB1
ARL15
DUX4
METAP1
PAWR
PNMA1
GNAL
CHN1
DCK
SLC12A4
JDP2
PHACTR2
TCAF2
ARPC2
FAM53C
CDC25C
PAQR3
KPNA1
SUPT20H
FAM222B
FRG2
DMTF1
COPS7A
PALM2AKAP2
PPM1A
TSPAN12
ERMARD
NUCKS1
RB1
OTULINL
NFATC3
ABCD3
VEZT
FGD6
NOTCH2
LOC100287896
LIPT2
C16orf87
XPO5
POLH
TSC22D2
DZIP1
PLEKHF2
THAP4
ATG4B
ABCA1
FAM53A
RCL1
NDE1
MARF1
CDKN2AIP
COX20
UBE2Z
COL23A1
ANAPC4
CDK17
YTHDF3
PCF11
CAMK4
PLAGL1
PRKAR2A
TXNL4A
PCCA
RBFA
SNX2
LIMS1
PRDX1
LRP2BP
ANKRD37
MND1
NRG3
ELK4
LAP3
ATAD2B
ARF4
CALM2
MRPL38
C8orf88
CREBZF
C12orf42
CCPG1
C15orf65
MARCHF7
HEXB
UFL1
TNFRSF21
C9orf40
SLC20A1
OSGIN2
HCFC2
GLT8D2
ERBIN
HNRNPA2B1
CBX3
FMNL2
OR2T1
UBE2D3
CISD2
PDLIM5
TOE1
MUTYH
HCN1
AMOTL1
KIF27
DPH5
RNF182
GCLM
PBLD
HNRNPH3
GOLGB1
LORICRIN
PTPRD
ZNF76
TIPARP
DTWD2
VCP
FABP5
C7orf31
NDUFAF6
WASHC4
SLC9B2
NSD3
LETM2
ITGB1
ARFGEF1
MYO1D
PANK2
LNPEP
TRIM41
EFHD1
FOXJ3
PPP1R21
RAB22A
ARPP21
BRWD1
ZC2HC1C
ACYP1
DSEL
XRRA1
SPCS2
WEE1
CTBS
GLO1
ZNF821
SLC17A5
H4C14
H4C15
THBS1
CADM2
CLTC
TSG101
MAP4K5
ATL1
ULK2
REV1
ASL
SLC25A51
CTNNAL1
SLC11A2
ASH1L
TOB1
H2AZ2
C3orf52
TRIQK
PRIM1
MTRNR2L1
ARID3B
MTRNR2L2
MSH3
DHFR
WDR74
NPAS4
ERCC1
MLLT11
CDC42SE1
TMEM95
KCTD11
RBPJ
SERPINE1
DNAJB2
PPP6R1
RNF103
TRIB1
IQSEC3
HTR5A
BIRC7
NKX1-1
GIP
FZD5
FSTL3
MTRNR2L8
GSDMD
SMAD3
NOS3
DHRS3
F2
LAPTM4B
KDM6B
FAM24A
HOXA3
H4C4
NDUFAB1
ATAD2
MARCHF3
ZNF341
TMEM9
LIN28A
CLDN14
INSM2
RCOR3
MRPL2
KLC4
PDLIM7
NTMT1
VDAC2
H2BC6
RNF213
TAF9
RAD17
AK6
POLR2J3
SLC45A4
BCAR1
USP42
TBC1D1
PLEC
COL7A1
RHOQ
ATP6V1E2
TGIF1
SLC7A6
MMP20
OPLAH
BRPF1
CAT
ACVR1
MDM2
TRIM48
SPIN1
LRRC61
DUSP1
CFLAR
FCRLA
AIFM2
ADAM17
JRK
LMNA
PGLYRP4
PLEKHA7
RBFOX2
P2RX6
FBXL13
ARMC10
HPN
TEX46
ZNF718
TRIM44
ZNF595
LURAP1L
TBC1D14
PLOD2
STK11
GPC6
TNFRSF12A
CLDN6
RGS3
SPATA9
RHOBTB3
KDM1A
CCNL2
MFSD10
GZF1
GPT2
E2F3
PIK3IP1
OTUD7B
ETFB
CANT1
MAN1A2
CELSR3
ITPK1
FURIN
ZC3H6
NHLRC1
THOC6
PIM1
HCFC1R1
PHETA1
ST6GALNAC6
ZFAND2A
NRL
BHLHE40
TAGLN2
SH2D6
TMEM268
TNIP1
ARL6IP1
PIK3R1
ARFGEF2
NFKBIA
PSPN
ALKBH7
SERPIND1
KANK1
TLE1
RNF19A
MACC1
SH3YL1
ACP1
NFE2
EPB41
NR1D2
NKIRAS1
STMN3
SKI
CFL1
PRAME
MET
SLC39A7
RXRB
PUF60
WDFY1
TEX45
ADAP1
INHBE
IER3
FLOT1
SQSTM1
CDK19
AMD1
BCKDK
S100P
ANKS4B
HIBADH
TRAF7
THAP11
NUTF2
CENPT
RNF144A
SPATA25
SYNPO
CYP26A1
C3orf86
HPCAL1
RFX1
ASIC1
TMC7
ZBTB38
NR4A1
KDM7A
CTSL
NEU1
LRP5L
SLC39A13
PKDREJ
CCL16
SMIM11B
SMIM11A
RNFT1
NDST1
TUBG1
RETREG3
KBTBD2
MTF2
ASB2
LZTR1
SERPINB6
MRPL40
HIRA
ITGAV
TRMT2A
RANBP1
GLRA1
KCNH7
CPT1A
KMT2E
SEPTIN9
SEPTIN5
EDARADD
KANSL3
FER1L5
SLC6A9
ZC3H12A
ZNF22
THEM4
ERRFI1
CTSA
RALGDS
AGPS
ATXN7L2
RTBDN
SDC4
NEURL2
FBF1
LMO7
FHL2
BRIX1
TTC12
PPP1R3E
USP32
NR2F6
EPS15
DGAT1
CCNL1
MYL12B
SSH1
CCNI
ADGRG1
RNF130
NDRG1
GRHL3
C15orf39
ARL6IP4
NTAN1
TSPAN10
NPLOC4
TACC1
BDH1
INAVA
STX1A
EPHA10
H4C5
ATP6V1G1
CDH15
ADK
FAM107B
HOXD12
KIF13A
L1CAM
TTC38
OSGIN1
UAP1L1
H6PD
NCOA5
SCT
CDHR5
ARL5A
PCK2
MLLT6
DIP2A
ARL8B
TSKU
MTRNR2L9
PRMT3
H4C12
NCKAP1
AXDND1
ZP3
ZNF367
CMIP
OSBPL6
MAPKAPK3
CISH
GP1BB
TBL1XR1
SLC16A1
TRIB3
THUMPD1
RHBDD1
LYL1
DPY19L4
SAMD11
OPRL1
LKAAEAR1
OBSL1
INHA
ODC1
ANXA8
SULT1A4
SULT1A3
H3-3A
ESRP2
EPHX1
SLC25A45
FRMD8
HEY1
CLTB
MAF1
DHRS13
TMTC4
NCS1
MKNK2
FST
UBE3C
AKAP1
ZNF592
ZNF165
KLHL18
KIF9
NBN
BARHL1
SYNRG
DNAJB12
NBPF1
FASN
ITGAE
SLC6A12
LRP5
IL1R1
CBFA2T2
CARHSP1
APOC1
ST3GAL2
NARF
DNAJB5
NCOA4
ERBB3
DNAJB3
EPB41L1
IRF2BP2
PHLDB2
SMIM17
CALCOCO2
MAPK13
DDIT4
ZKSCAN2
PHF19
USP9X
SMARCD2
CDKN1A
CPPED1
FAM168B
BUD13
DRC7
RAB37
SSNA1
ANAPC2
SERINC2
BPTF
KCTD18
AGAP3
ZNRF2
RILP
POLD1
ARHGEF28
HES1
APBA2
SPATA1
GNG5
PTPDC1
ACSL1
ZNRF3
SLC49A3
TEN1
ACOX1
RASAL2
TANGO2
MAML3
GMEB2
SEC31A
PIK3R3
BAIAP2
ANKRD28
WDR97
DENND4B
AXL
SPATA20
IL13RA1
FLOT2
IKZF5
ACADSB
ATF3
PIM3
KMT2A
PAQR8
RTEL1
DPP9
RGS19
SEPHS2
PPP1R3C
CDK3
TMEM86A
KLHL5
ESCO1
PPP1CB
KLHL12
SMARCD3
PET117
KIFC3
KAT14
SF3A2
PLEKHJ1
CX3CL1
PGRMC2
SECISBP2
NOL4L
CYB5R4
PARL
TBC1D13
SMURF2
HNRNPUL1
CNNM3
AHCY
PPP1R12B
PXT1
KLF4
KCTD20
MIS18BP1
ZNF101
ATP13A1
LANCL2
FBXO4
ZFAT
TIGD2
KANK2
GET4
CRLS1
ANKLE2
FGFR4
ASPSCR1
IST1
MOB1B
RDX
TOLLIP
WTAP
SOD2
MAPK1
MIA2
TARS1
SLC39A3
DCAF11
CTCF
TMEM41B
RICTOR
POLD4
PKP4
NR1D1
CCDC148
NIPSNAP2
RNF166
ENOSF1
CTU2
SLX1B
SLX1A
BOLA2B
BOLA2
WDR36
COL16A1
TMEM242
CXXC5
TLCD4-RWDD3
TLCD4
NKD1
ATP7A
DNAJB1
SH3BP4
PHACTR4
MEMO1
DCAF10
KMT2C
GBA
PEBP1
PPP5D1
NUP107
CALM3
LOC100130520
FOXK2
CD300H
RAB17
TMEM87B
SGK1
RNF220
NDUFA4
ZNFX1
FASTKD1
RAN
HSD17B8
SLC29A1
UPP1
SYNJ2
DISP1
KMT5B
PICALM
DCDC2
DNAH14
MAMSTR
ETV4
SFT2D2
FAM102B
GIPC1
NPIPB6
METTL9
SLC35E2B
LASP1
GCFC2