ChIP-Atlas: Target genes

Potential target genes for MSX2

Query protein: MSX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10003071 | Trophoblast stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MSX2's Target genes

◢ MSX2: Average

◢ SRX10478468: MCF-7

◢ SRX10478469: MCF-7

◢ SRX10003070: Trophoblast stem cells

◣ SRX10003071: Trophoblast stem cells

◢ SRX10003072: Trophoblast stem cells

◢ MSX2: STRING

RBL2
MTRNR2L8
MTRNR2L2
CRPPA
HSD17B4
ITGAM
CCDC141
NIPSNAP1
ENTPD1
ANKRD23
RNF43
TMEM52B
LNX1
COLEC12
SLC10A6
ATP2B1
CCDC200
WDR74
MIS12
DERL2
RABGGTB
EID2
SLC7A6
SH3YL1
ANKRD1
SLC7A9
SH2D4A
ZNF749
PKIB
KRTAP3-1
OLFML1
PRKCZ
FGD3
POU5F1
GABRR3
SH3BP4
ITGA2
SLC7A7
ZNF641
C6orf163
DUSP21
CCR5
INSL4
DLG2
P2RX6
TMEM245
ZNF343
MTRNR2L9
HERC4
FBL
FAM110A
SEH1L
ULK2
STS
BIN1
LRRC14B
PLD5
KRT71
UIMC1
LSM14A
RGPD2
RGPD1
LHX4
SNX27
KDM5C
HOATZ
BTG4
ANXA3
IQGAP2
PIP4P2
ADAP1
PLAAT5
LETMD1
SLC25A34
ZNF444
NKIRAS1
LSMEM1
SIX2
CTNNAL1
SUPT7L
SLC4A1AP
BRD4
C1QBP
RASSF2
DAW1
TLK1
ERP27
TACC2
FUT3
FREM2
NANOGNB
TRPM6
LACTBL1
DNMT3A
SPR
FMN1
NCOA1
OR2B11
KIFC3
DOT1L
LGR5
PLXNB2
IL22RA2
DEPP1
ZFPM1
CSF1R
SRI
CLCN4
CLTC
BABAM1
TNFAIP3
NRBP1
KRT8
TMPPE
GLB1
USP11
TENM3
NPL
TRIM22
TNFAIP8
TRIM45
PEX3
ADAT2
MYLK3
NR4A1
ITGB6
LDAH
ADGRF4
MBOAT2
SLC45A4
ZNF552
PPARG
KIAA1586
ORAI3
CDC14B
MAGI1
CCNL1
HSD17B1
SLC25A26
EIF3D
BAIAP2
PCCB
APBB1IP
TNRC6A
CMC1
PIK3C2A
MTUS1
ZNF76
MICB
PRORP
PPP2R3C
PARP4
ANXA6
C11orf94
MPP4
SEPSECS
MYO18A
LHX8
KMT5C
PDGFB
GRHL3
ADGRG1
GALNT11
EXPH5
IFT43
SLC12A6
SLFN12
ABCB8
CSGALNACT1
AMOTL2
CLPB
ZNF335
GOLGA8B
ISM2
BLCAP
LATS1
IGFL4
MKRN2OS
CDS1
SYTL5
TMEM211
FERMT1
DENND6A
TTLL7
TFDP2
ARHGDIB
TRIM16L
CYS1
SCNN1A
TREML1
NSFL1C
EDNRB
CHD3
SLC39A1
RIOX1
PCYT2
CS
NRK
SHROOM3
PICALM
JUN
CLPSL2
GRAMD1B
ARHGAP45
OSGIN2
MTARC1
RHOH
C9orf131
TIGD2
SCAMP4
ADAT3
BATF
ATP1A1
AMD1
RFLNA
TLN1
CREB3
RNF19A
LATS2
EHBP1
WT1
ARHGEF3
WDR87
SIPA1L3
RBM45
WBP1L
PTPRD
TLE3
SULT1A4
SULT1A3
ZMYND11
METTL25
CCDC59
RANBP2
RIMKLB
RHOB
PTN
LIMA1
TMPRSS11F
PPP1R9A
NEURL3
SPECC1L
AGAP3
DDX41
ZNF799
HTRA4
LMO7
CKB
SLC4A8
GALNT6
ALDH4A1
PLS1
CYSLTR2
MEF2A
FOCAD
SMARCA2
S100A16
HK1
ADIPOR1
CD59
MPP1
WWOX
PALM3
MILR1
DTD2
EHMT2
C2
TTLL4
LMBRD1
FSCN1
C11orf95
ALDH3B2
HSPB7
MID1
NHSL1
SPHK1
SF3B4
DGKD
CALHM4
USP36
FAM83A
AFAP1
SPINK4
SLC49A4
HSPBAP1
KYAT1
MRPS24
ZBED9
HSPA9
SLC9A1
STK11IP
AP2A1
TBC1D24
GLDN
PPEF1
FGD4
ASAP1
PDCD1LG2
ZNF451
RAPGEF6
CCNG2
MPO
RASGRP2
WDR83
MAN2B1
UBXN4
GAS2L3
FER
KLF6
TBC1D22A
MTR
CCNI2
ATG9B
FOXJ3
CAMK2D
ROPN1B
PPP2R3A
GMEB1
PNKD
FAM169A
DCTN1
ALPK3
IMPA1
FBXO5
PAPOLA
P2RY6
CEP78
GNAI1
EPB41L1
GET4
EPCAM
IL31RA
HMCN1
RTN2
MIEF2
FLII
TMEM68
TGS1
LARS2
PRRC2B
IGFL2
ZNF221
MMP15
LAMP1
DNAJB2
EPHA4
NAPEPLD
MAN1A1
PTK2
CRYBA2
SH2B2
ERVW-1
DDX52
KLF7
DUSP3
RILPL1
TBC1D15
POLR1H
CRY1
FUT8
VTCN1
TRIM34
RAB9B
KLHL30
ADPRHL1
RESF1
VIM
TNIP3
SASH1
MAB21L4
NDUFA4
ZNF292
PODXL
ZFHX3
PSME1
CGB2
AGXT
ZNF566
CTH
CLN3
UBE2V1
LAPTM4A
SUN1
EDEM2
NMI
ZNF845
SLC35E2A
NPPB
NMT1
DCAKD
CCDC88C
CWF19L1
LOC644090
SULT6B1
SPECC1
CLCN3
DDB2
KRT13
BMPR1A
ZNF777
SGK1
SRP68
FCSK
ELMOD2
ARHGEF2
BCAS3
VNN2
LAPTM4B
TMEM9
BRI3
MORC4
CEP85
NANP
KRTAP2-2
TRIP4
WWC2
PPFIBP2
MYBL2
P2RX7
THAP1
UBB
RAPGEF2
NR2F2
ETV6
CSF2RB
TPD52L2
DACT2
RAD9A
ZNF263
SMPDL3A
PRR19
PAFAH1B3
DAB2
PINK1
NR1D2
PSMG1
U2SURP
PCGF6
CDKL1
SMIM6
RFWD3
SMC3
PPP5D1
CALM3
GSTA3
ZNF114
AXDND1
NEBL
PES1
SPAG17
TGM1
TBX3
EML5
PGC
SPTBN4
RNF13
MAP11
L1CAM
INO80
CAMLG
BLVRB
RXRA
RASGRF1
ART5
ZNF318
DEAF1
C4BPB
ATF6
SYCE2
DHDDS
GSTO1
SLC13A3
ALAD
TMEM154
RGL1
IAH1
GMFB
TMCO6
LNP1
ZNF155
UFD1
PPP1R12C
MXD3
CDC45
ACOT2
TRIML2
CCNP
BCAR3
TMIGD2
TMEM18
FURIN
H2BC21
H2AC21
H2AC20
ACSL1
GJA5
FBXO32
VTN
GPR1
TXNRD1
SDCBP2
NUCB2
TPRA1
PRIM2
PLEC
FAM107B
ING2
TMC4
RPS6KA4
ROPN1
MFSD10
KIF3A
GPRC5A
TMEM31
NT5C2
EPS8
AXL
TOM1
SUPV3L1
R3HCC1L
KDM4C
MEF2D
YEATS2
PRSS8
GAR1
SOWAHB
SOS2
POLR3B
NRBF2
CD8A
NBN
PLLP
NR1H3
KLF5
HMGA1
GXYLT1
OARD1
NFYA
PIK3C2G
DUSP9
TGM2
LSR
FBXW12
CAPN8
GTF2H4
ZNF587B
SOCS2
SLC25A36
RBM19
QPRT
OSBPL2
DENND2A
TNFSF12-TNFSF13
TNFSF12
STX7
PYROXD2
MRPL58
SIRT4
RNF144B
NDUFB6
TADA3
PITRM1
CSNK1E
ARPC4-TTLL3
ARPC4
ADCK1
TMEM144
NUDCD3
IPMK
C1orf105
AP5B1
GPR146
MED28
STARD13
MGST3
ZNF433
EVI5
CGB5
SEPTIN9
CLCC1
ACTR1B
TGIF1
ZBED5
RANBP3
MRTFA
DHX30
TNS1
TKFC
SGK3
RRM2B
RNF44
GLTPD2
FZR1
DDB1
COQ2
NPTN
RBM39
PIP4P1
PARD6A
ICA1L
ACD
RPF1
KAT5
ZNF14
KIAA0100
HSH2D
ZZZ3
VPS35
SULT2A1
SLC28A3
RPS27
PPAT
PALLD
PAICS
CD164
STC2
ODAPH
FUT4
DIAPH3
CTR9
C12orf73
ADGRF5
AAAS
PFDN4
H2BC12
H2AC12
RRBP1
RABEPK
PPP1R15A
ZBTB4
POLR2A
LPP
LRRC75A
RPL6
PTPN11
USP2
ITPRIP
IRAK2
EEA1
MREG
SYF2
MRPL55
KIAA0895
CELSR3
ANLN
RPN2
MROH8
SLC6A4
ZNF44
TMED1
PLEKHF1
ILVBL
GPR108
CALD1
ABCG1
NEU1
HNF4G
RAD50
BRMS1L
SLC35D1
PEX11G
LUC7L2
GSTCD
COQ9
CIAPIN1
CALM2
ZNF750
PRAG1
MRPL45
GTPBP1
EPB41L4B
ZBTB10
TCF25
GLRB
ERVFRD-1
ENPEP
CCPG1
C15orf65
PDE4DIP
PTP4A1
ADNP
RNPEP
ERCC6L2
CCDC183
TM2D1
SYDE1
GCN1
RIOK2
VAT1
USP3
SLC25A35
PLK3
LRP10
DEXI
CCDC57
ATP5MF-PTCD1
ATP5MF
SLC29A1
NAA38
CYB5D1
CRISPLD2
CNN3
ZFP36L1
SNRPC
PDSS2
LTBR
LRRC56
CNPPD1
CEP120
CLOCK
PRSS22
MGRN1
MARK4
KLHL9
JAG1
IPO7
CBL
H2AX
H2AC15
UNG
SLC25A11
RPAP3
RNF167
RGPD6
RGPD5
IFRD1
GABARAP
CHPT1
TNFAIP1
IFT20
SUPT4H1
TFPI
SFR1
FLCN
EGLN2
DUSP7
C1QTNF7
ADAM8
CTDSP1
TBC1D9
RDH13
NEK9
IQCB1
GRWD1
GRAMD2B
FNTA
FAM8A1
EAF2
ANKRD36C
ZNF546
PPARD
PDZK1
HCFC2
GLT8D2
CGB8
ALG14
RPIA
CHRNB1
LOC112694756
TNFRSF19
FUS
SUMF1
SET
GPRC5C
SMPDL3B
YIPF3
TAX1BP3
SETX
RALGAPA2
PRRT1
PPT2
POLR1C
NR6A1
GCC1
GATA6
EMC6
CEP112
BAG6
APOM
STK19
SF3B5
SBF2
OTUB1
MC1R
LRPAP1
HMGB2
GRK6
DXO
CRKL
ATG2A
AP2A2
ABLIM1
DACT3
UNKL
TMPRSS12
SRP72
SLC25A28
SLC19A1
SIK3
RNH1
PRKACA
PIGO
NINJ1
MCF2L
LARP1B
ERVV-2
CTU1
ALOXE3
CFAP45
ZNF181
YDJC
RAP1B
RAP1A
KDM3A
YTHDF2
WDSUB1
TMEM62
POLR1B
NDEL1
KDM4A
GCHFR
CNP
YJU2
ZSCAN4
TUT1
MPC2
HRH1
DCBLD1
DCAF6
COG7
CDC42BPB
CCN2
RAB30
PDCL
TASP1
TAP1
PSMB9
PPIL1
PDXK
NMRAL1
HMOX2
FDPS
ALDH3A2
TMEM267
ZNF513
RMND5B
PAK1IP1
GPX1
FBXO11
DOHH
CLDN14
C6orf52
TNKS2
VPS45
LTBP1
CRIP1
FAM104A
SLC22A11
NCAPD2
N4BP2
MRPL51
FDX1
FAM53A
FAM151A
CENPH
ATF3
SLC39A6
SHB
RFFL
RBM15
PTCHD4
LRCH4
LAD1
HPS5
GTF2H1
ELP2
ABCF3
SLC44A2
SRSF1
NCLN
KLC2
DCAF5
ALX1
NFX1
ZNF331
MGAT5B
WWP2
SRGAP2B
RPUSD4
KIF17
FAM118B
DGLUCY
CPM
PDXDC1
SSR3
PYM1
OS9
NDUFS7
LHX2
DPAGT1
BBC3
PRDX3
LGALS8
ZNF611
VLDLR
PGM1
KPNA4
TNFRSF10B
ST7
SLX4IP
PIP5K1A
HTRA2
CFLAR
CRYGC
DDX50
ARHGAP27
ZDHHC17
TJP2
RCAN1
RBM4B
ECT2
CNKSR1
ZSCAN21
USP40
TSNAXIP1
TESK1
RUVBL1
RANBP10
PSMD5
PPP6R1
DIMT1
COTL1
BCL6
AGPAT1
SIGIRR
RIOK3
PHF5A
MAPRE2
ACO2
TRIM56
SMDT1
NUTM2G
MRPL54
LAMB2
APBA3
AP1B1
ZNF219
SREK1IP1
RNF207
RAD51B
EFNA4
DAG1
CWC27
CDC20
TLE6
RNASEH2B
C20orf141
ATP5MG
ABCF1
ZER1
DYSF
BZW2
TIAM1
ST7L
SPNS1
SLC39A13
NOL8
MAP7
HPS6
FBXO4
CENPP
CAPZA1
ARL17B
ARL17A
PPP6R2
ZNF823
PRXL2A
NUTM2F
MTURN
FHDC1
C6orf132
BBS1
BTRC
CCDC130
TCFL5
SQSTM1
SPATA24
CBFA2T2
WASHC4
SLC1A5
PIGA
NVL
MYG1
HNRNPD
DNAJC15
DNAJA2
CLTB
CDKL2
MYL6B
ZNF280D