ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477187 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◣ SRX10477187: Hep G2

◢ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
IQSEC3
ING3
XKR7
INSM2
LIN28A
DEPP1
NKX1-1
HTR5A
FAM24A
CELSR3
GLRA1
NRL
DCAF11
KCNH7
L1CAM
TNFAIP2
MTRNR2L2
MSH3
DHFR
RAB37
CPLX2
MTRNR2L1
EPHA10
SCRT1
MTRNR2L8
SLC6A12
BARHL1
DUX4
SH2D3C
SMIM17
WDR74
FRG2C
CHGB
RTBDN
FAM3A
STX16
OTX1
SMIM19
SLC20A2
MAPK8IP2
RANBP3
ITGB1BP1
CPSF3
UNC80
SNAP25
TBC1D10B
MYLPF
RIN2
SCRT2
LHFPL5
ZNF670
ANK1
SH3BGRL2
MUC3A
GDAP1L1
DLGAP3
SST
IL11RA
HES3
VGF
MRPL39
OGDHL
GRM1
SIGLEC10
KCNK12
KCNH6
SCGN
MYT1
CHRNB2
NPPB
CCDC200
SLC12A5
OPA3
MRPL44
GCFC2
PLEKHM3
CEMIP
MTERF4
NTSR2
MMP24
PDE4C
SRRM3
SEZ6
CYB5R4
PGBD5
TMEM242
AAR2
H4C12
CDIP1
PTPRN
RAD54L2
RPS7
NUF2
PSMF1
HPCA
PPP3CA
MTRNR2L9
IPO4
HDAC2
PCNA
CHRM4
LEMD3
CPPED1
CDK5RAP1
FRG2
NDUFAF5
ESF1
RBM28
PRMT8
EXT1
SCFD1
VWC2L
SLC39A3
PET117
KAT14
NOC3L
PIH1D1
ALDH16A1
USPL1
HMGB1
STMN3
RTEL1
PRMT5
DNAJC6
NME1
MFF
MED23
DTD2
NHLRC1
EPM2A
CLVS1
TPH2
SNTG1
ZFYVE27
RFC1
SPECC1
TM9SF1
SLC7A6OS
PRMT7
ABCC6
INTS12
GSTCD
MAP1LC3B
FBXO31
PTGDR2
MARCHF4
SAR1B
UNC13D
TRIP4
KATNA1
ZNF23
SOGA3
TMC7
H4C3
H1-6
ORMDL3
TIGD1
EIF4E2
SEZ6L2
ASPHD1
PDE6D
COPS7B
CALM1
CHGA
ANKRD34C
GTF3C3
FAM227B
DTWD1
MTF2
FOXJ3
METTL9
NUS1
CCDC88A
PIK3R3
EVI5
RESP18
VAMP4
APOB
FABP1
VTN
SEBOX
SARM1
SLC35A3
GRIA2
AKAIN1
TANK
MAP3K7CL
CCT8
CWC25
RABGGTA
SLC25A21
TOB1
TMEM181
ZPBP2
IKZF3
NEUROD1
C14orf93
NSFL1C
DCP1A
SF3A3
PKP4
CCDC148
RANBP2
HEATR5A
WTAP
SOD2
KDM3A
ZNF841
CNPY3
TRAF6
RAG1
LRRC37A3
SP2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LTV1
ZER1
TSPAN10
NPLOC4
CCNL1
CCDC92B
MRPL30
MITD1
COMMD1
CCT4
FUS
ODC1
WASHC2C
XKR9
LACTB2
PHF3
PSMD7
HSP90AB1
PDE1C
SNRPB
ACIN1
C14orf119
KANSL3
FER1L5
PAXBP1
HRH3
LAMP1
ATP6V1B2
DPY19L4
USP14
BICDL1
FRA10AC1
GGA2
SLC30A6
PSMD3
PGRMC2
CMTR2
UBE2Q1
RBM39
SNAP47
JMJD4
STAT3
SNRPD1
FN1
DDX1
ATCAY
SRSF2
MFSD11
TACO1
NDUFA12
TUBGCP3
USP30
IRF9
HBQ1
HBA1
ZNFX1
PALB2
DCTN5
PRKDC
MCM4
EXOC2
NFAT5
ACSL3
EXOC3L4
FGB
SCAMP5
DHRS4L2
RSPH3
KIAA1958
C9orf147
SEPTIN9
GORASP2
MRPL21
IGHMBP2
PRDX1
ZNF473
VRK3
ZFP1
PTPRS
EBAG9
MTIF2
POLR2C
ITGB3BP
EFCAB7
PDXDC1
PYURF
PIGY
HERC3
NET1
ZNF451
SNRPB2
THUMPD2
CTNNB1
METTL15
KIF18A
MAT2A
KCNH4
ID2
MRPS15
TSN
EIF2B3
N6AMT1
EBI3
TMEM222
ZNF165
NOL7
SEC23A
FST
ATIC
ERN1
XRN2
CABP7
RPTOR
ZC3H7A
NUP62
IL4I1
ATF5
ERMARD
FZD5
ANKRD36C
MRPL58
ZNF703
OPRM1
TMEM167B
SEC11C
FBXL16
SPTSSA
FAAH
HOXD1
ANKRD36
DDX18
AP3B2
SLC7A14
ALG1
AATF
ZNF503
TSPYL4
DSE
RBL1
GPCPD1
LRP6
LRRC59
WDR43
C8orf33
KLF11
RTTN
PMS2
AIMP2
HECTD1
POLDIP3
TOMM40L
APOA2
TOR1AIP2
TOR1AIP1
MDP1
CHMP4A
GEMIN2
MRPS18C
HELQ
NCOA3
NCOA5
FAM187A
EFTUD2
CCDC103
SLC37A4
KDM6B
GPRIN1
COL23A1
SIRT4
MARCHF8
NABP1
USP4
TBC1D19
FAM207A
MUC5B
RAB11FIP4
OPA1
RNF103-CHMP3
RMND5A
SLBP
HM13
DNAH14
RNF6
HSPE1-MOB4
HSPE1
HSPD1
WDR70
MOB4
MRPL40
HIRA
HHATL
SPATA25
NEURL2
CTSA
ZSCAN30
KCNC3
PTP4A2
SNRPC
TMEM230
POLE4
AGMAT
ABCA3
ALG10B
FAM133B
NPIPB9
ALG6
C17orf75
UGT1A1
LONP2
ABCC11
TRIB1
THOP1
SGTA
ANO10
ABHD5
TUBD1
RPS6KB1
NUP54
NDUFS7
FAM53C
CDC25C
ZNF337
KCTD18
RNF130
CERS6
NFE2L2
MAPKBP1
MBTPS2
VIRMA
SCIMP
TRMT6
MCM8
FAM222A
TEFM
PTMA
TSEN54
CASKIN2
TMEM106B
CDK5R2
URGCP
MLLT1
ZDHHC7
UBE2D4
RPL31
CBWD1
SLC44A1
H4C11
PIGL
NCOR1
DRG2
RTF2
AIP
SMG8
GTF2H2
PDE4DIP
CRYM
SORL1
HS3ST2
TBCD
SF3B6
FAM228B
SLC24A1
H3-3B
PMS1
ORMDL1
GUSB
PEDS1-UBE2V1
PEDS1
NDUFS4
ELMO1
CSTF1
AURKA
CHD9
SRP54
VTA1
NMBR
TF
NAA20
UTP4
DERPC
CHTF8
AURKAIP1
ZNF770
MANBAL
ARHGEF12
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
JUND
DMAP1
BRMS1L
CDCA7
YARS1
S100PBP
OGFOD3
HEXD
LDHA
LOC100287896
LIPT2
LCLAT1
HDAC4
SLC25A51
CHEK1
TOMM5
RPS6
PSME3
RNASEH1
CCDC174
FUCA2
FANCL
EIF2D
MCAT
PPIP5K2
PUS1
ACTL6B
PTPN4
H2BC5
H1-4
MRPS5
TRAPPC6B
PNN
NUP160
ZNF579
GPR6
DRAP1
C11orf68
PREPL
CAMKMT
RRP1B
HSF2BP
CRH
SPOP
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
RPL10A
ZNF461
CNTRL
C5
FTL
PPY
CCDC66
PEX3
ADAT2
KIZ
USP42
NDUFC2-KCTD14
NDUFC2
HEXA
COPS6
ANKAR
PCIF1
GLO1
STX18
H4C15
H4C14
TRIM67
PTDSS1
MTERF3
DLL3
ARFGEF2
EGR4
MRM3
GLOD4
H3C12
H2BC17
H2AC17
RUVBL1
EEFSEC
SRSF6
CCDC43
GPR158
CCL16
RRN3
GINS3
ATP5F1E
SPINK1
CCNC
DUS2
DDX28
SLC25A4
PINX1
PPP4R3B
ZC3H6
C19orf53
FBXO4
WDFY1
TIPARP
COQ9
CIAPIN1
EDC4
RARS1
ASNSD1
ASDURF
HNRNPD
OSBPL11
VPS25
KIF15
KIAA1143
STARD4
CACYBP
TRIM48
GOT2
FITM2
TVP23B
NSG2
TRIM26
ZNF131
JUNB
NXF1
TMEM101
WDR35
CCT2
FAM162A
CCDC58
PPP1CB
USP34
PHIP
EEA1
CCDC126
C11orf49
STK25
KIAA1586
DNMT3A
TTI1
RPRD1B
RRP15
DSTYK
LAMTOR5
ST8SIA3
IARS1
CITED2
ANKRD53
DUS1L
EXOSC2
POLR3D
BTG1
NEU4
PGAP2
SH3YL1
ACP1
BMS1
WDR45B
GINS1
ZNF518A
HMGCS1
PHF20
CCDC117
CBWD5
GPC6
ZBTB4
SLC35G6
POLR2A
AKAP10
SPRED2
SRSF11
FAN1
E2F6
SLC25A10
HPS5
GTF2H1
COPS4
TMEM107
TMEM41A
PRKAB2
CHD1L
DCAF10
PMVK
PLAG1
LTBR
CHCHD7
GDAP1
EIF3B
SPNS1
DIS3L2
GTF3C5
CTSB
HDDC2
IDH3B
C16orf72
TTPAL
SLC25A13
DNAJC10
ALKBH3
XRRA1
SPCS2
SNRNP35
ETNK1
CALB1
CCN2
SEC62
WASHC4
C6orf163
COPS8
LDAH
BCL7B
CCDC83
STAT1
ZC3H15
TAF5
PBK
SAYSD1
MRPL53
METTL25
CCDC59
PCK2
TRDMT1
GTF2H2C_2
GTF2H2C
TINF2
SNX5
MGME1
TATDN3
NSL1
PUM3
HCN2
CCDC57
SULT6B1
PYCR1
FANCD2
ERO1A
CDH15
MIA2
THAP4
ATG4B
FEM1C
CRNKL1
CFAP61
DDX19A
CLCN7
ZNF8
ABT1
TEX46
KDM1A
HMGN3
FURIN
NDUFS3
KBTBD4
ZGPAT
ARFRP1
MRRF
ENO1
AGPS
SUN2
H4C4
EDARADD
EDEM2
SEH1L
TAF3
LMCD1
SUMF2
KNL1
POLR3E
C10orf88
TRIAP1
PRRC2B
TBL3
ZMPSTE24
MEMO1
CUL5
RETREG2
CNPPD1
SDC4
BACH1
PRR13
WDR36
RGMB
FAM98B
RFT1
LOC102724265
DHRS2
TTLL4
TXNDC9
EIF5B
SLC33A1
SRPK1
BAG2
NDRG1
TMEM186
PMM2
RPS15A
ADAM17
PARL
INSR
EIF3F
PUM2
AARS2
ARL6IP1
SCGB1C2
SCGB1C1
SEC13
ESCO1
RNF19B
RCBTB2
NUDCD1
DEF8
EXOSC6
MMAA
POLR2J3
CPNE9
SLC18A3
CHAT
MTHFD1L
ID1
MTX2
NUBP1
USP15
KLHDC2
DET1
COIL
CALM2
AASDH
BBS1
DIDO1
GID8
RPL3
RBM45
PDE11A
SYN1
FAM177A1
EFCAB13
NBPF1
MARCHF7
HEXIM1
ARSB
ABCF1
G3BP1
EIF3CL
EIF3C
SACM1L
MTBP
MRPL13
MARCHF11
EIF4A2
ALG10
SLC45A4
GMEB2
ADGRG6
TMEM169
PECR
LSM12
G6PC3
TDRKH
REX1BD
ABCD4
NUDT3
LRRC58
ZSWIM7
TTC19
AP1G2
GALK2
COPS2
IMP3
USP47
TMEM183A
SYP
TASOR2
TUBB3
MC1R
ADNP
POR
CEP295
C12orf73
H4C2
H3C2
DR1
RPL5
SF3A2
PLEKHJ1
PCCB
MORN2
DYRK3
DHX57
TRMT61B
PNPT1
GPT2
PPIG
CEP68
AGFG1
DAD1
ALDH3A2
PAH
LARS2
INTS2
FARP2
CPQ
BCKDK
ZBTB45
LGR5
METAP1D
APOC3
MTLN
ZCCHC4
ATF3
TATDN1
NDUFB9
ARIH1
MFSD14A
RBM12
CPNE1
TAMM41
ATF7IP2
CTNNA2
CENPA
NSUN5
NUP50
BBS5
FAM76B
CEP57
PHF14
KCTD5
NID1
TAB1
SPTLC1
SUPT7L
SLC4A1AP
WDR11
SMPD3
VPS16
PCED1A
CDC16
BIRC5
TMEM39A
FBXW2
ORC4
MBD5
DBI
C2orf76
DCLRE1C
MED31
C17orf100
C8orf37
RBP4
CHMP2B
SETD3
RUBCN
LACC1
KDM2A
GOLIM4
FYTTD1
DNAJB12
CCNK
CCDC122
CCL20
MRPL3
WDR31
EPHX2
TTC23L
NFYC
PPARD
GTF3C6
TENT4A
DNAJC11
STRAP
SLF2
GRAMD1A
COQ5
NUP153
PPIL4
UCKL1
PPM1D
STAU1
DDX27
PSMD6
TASP1
NDUFV3
PDP2
UGDH
SUGCT
MPLKIP
GDF5
DTD1
CEP250
MRPS31
LOC112694756
TTC4
G2E3
NGDN