ChIP-Atlas: Target genes

Potential target genes for HOXD1

Query protein: HOXD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10477188 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HOXD1's Target genes

◢ HOXD1: Average

◢ SRX10477187: Hep G2

◣ SRX10477188: Hep G2

◢ SRX360007: LoVo

◢ HOXD1: STRING

NPAS4
XKR7
IQSEC3
ING3
INSM2
DEPP1
NRL
DCAF11
NKX1-1
HTR5A
TNFAIP2
LIN28A
FAM24A
MTRNR2L2
MSH3
DHFR
CELSR3
L1CAM
CPLX2
RAB37
MTRNR2L1
SLC6A12
GLRA1
SH2D3C
KCNH7
SMIM17
DUX4
TBC1D10B
MYLPF
WDR74
MTRNR2L8
MAPK8IP2
IL11RA
RTBDN
RANBP3
OTX1
CHGB
BARHL1
DLGAP3
EPHA10
SCRT1
FRG2C
OPA3
ORMDL3
RIN2
SLC45A4
LHFPL5
HPCA
CCDC92B
SRRM3
MYT1
MUC3A
SNAP25
SIGLEC10
KCNH6
MTRNR2L9
VGF
SMIM19
SLC20A2
FRG2
MMP24
INTS12
GSTCD
HES3
FAM3A
ITGB1BP1
CPSF3
SLC7A6OS
PRMT7
GRM1
STMN3
RTEL1
UNC80
PCNA
KCNK12
CCDC200
METTL9
JUND
SST
PEX3
ADAT2
NDUFAF5
ESF1
SCRT2
GDAP1L1
PLEKHM3
ZNF670
CYB5R4
EBI3
CHRNB2
GTF3C3
PTPRN
CDK5RAP1
NTSR2
DNAJC6
ABCC6
STX18
STX16
DUS1L
DCP1A
RANBP2
KLF11
PSMF1
SLC39A3
FURIN
TMEM181
OGDHL
IPO4
SPINK1
PPP3CA
TMC7
MOB4
NPPB
DDX1
TRMT61B
JPH4
H4C12
SP2
COPS8
TMEM242
CCNC
PIH1D1
ALDH16A1
MRPL44
NOL7
MRPL30
MITD1
MTF2
DPY19L4
PDXDC1
POLR3E
CWC25
PDE6D
COPS7B
C14orf93
SH3YL1
ACP1
EXT1
PTGDR2
USPL1
HMGB1
TTI2
ANK1
PRR13
MARCHF4
VTN
SEBOX
SARM1
SF3A3
MED23
SLC35A3
TMEM186
PMM2
NME1
FAM227B
DTWD1
USP30
SVOP
COMMD1
CCT4
STK4
CHRM4
NSFL1C
PRMT5
GPR158
TMEM107
SCFD1
TACO1
IRF9
PHF3
PHF1
RPS7
TMEM41A
RAD54L2
SNAP47
JMJD4
LRRC59
MRPL58
ACTL6B
VNN3
TRIP4
CEMIP
RBM28
TIGD1
EIF4E2
EXOC3L4
AAR2
WDR36
SH3BGRL2
MRPL40
HIRA
LRRC37A3
KANSL3
FER1L5
HBQ1
HBA1
SNRPB2
SYP
MRPS31
RABGGTA
USP14
ATCAY
CCL20
SLC12A5
FOXJ3
NDUFS3
KBTBD4
CPNE4
CCDC88A
WTAP
SOD2
PTPRS
SCIMP
ZNF841
SLC30A6
GCFC2
HSPE1-MOB4
HSPE1
HSPD1
PTP4A2
MFF
UGT1A1
HDAC4
E2F3
MAP1LC3B
FBXO31
PMS2
AIMP2
TEFM
HS3ST2
KRCC1
SEZ6
SLC25A21
EXOSC6
LEMD3
HOXD1
ANKRD36
ZNF292
TSPAN10
NPLOC4
CCNL1
BCKDK
SOS1
HEATR5A
PTMA
DRG2
NUF2
EXOC2
PPP4R3B
CALM2
PET117
KAT14
TM9SF1
XRN2
TSEN54
CASKIN2
DTD2
PGRMC2
GMEB2
SAR1B
MTIF2
RBL1
NUDT1
MRM2
MTERF4
FGB
SNRPC
RGMB
CDIP1
KDM3A
UBE2Q1
PREPL
CAMKMT
PHF14
SLC44A1
MRPS23
RTF2
NUP153
UCHL5
RO60
HHATL
MRPL3
TBCD
MRPL53
THUMPD1
BICDL1
AIP
PRKAB2
CHD1L
METTL25
CCDC59
PYGB
EAPP
FAN1
HDAC2
PKP4
CCDC148
TBC1D19
TASOR2
HMGA1
SCGN
MMAA
VWC2L
CNPY3
GUSB
GOT2
STK25
TMEM222
ZBTB45
CDKN2AIPNL
RPL27
ZNFX1
TSN
DUS2
DDX28
KIAA1586
EXOSC2
SSBP1
THOC3
FRA10AC1
ZNF703
SF3B6
FAM228B
STRADA
UBAP2
MTHFD2
NXF1
XYLB
HAAO
ANAPC11
ALYREF
SAAL1
HDDC2
DNAJB3
BLOC1S5
SEZ6L2
ASPHD1
SEPTIN9
FST
POLR2J3
RBM12
CPNE1
WDR31
CALM1
RESP18
RBM39
SEC23A
SMG8
MRM3
GLOD4
SKOR1
PGBD5
TANK
RNF130
RMND1
ARMT1
MAP2K2
PPP1R3C
NCOA5
OPA1
TRMT2A
RANBP1
RGS3
RSPH3
MDP1
CHMP4A
PPM1H
ZNF165
DHDDS
NOC4L
NFKBIA
DDX51
NOP9
DHRS1
ABCA3
RRP1B
HSF2BP
CCL16
TOMM22
NDUFA12
SEC14L1
TRMT6
MCM8
FAM98B
POLR1H
HECTD1
SPATA25
NEURL2
CTSA
CSTF1
AURKA
KIZ
SNX17
EIF2B4
RAB5IF
TRMT44
ACOX3
CPNE9
PIGU
LDAH
MIA2
ENOSF1
CLK1
PTPN4
PPIL4
PRMT8
UNC13D
GRIA2
DCAF10
ZGPAT
ARFRP1
RFT1
GJA10
DNAJC24
DCDC1
LAMP1
PSMD3
H3C12
H2BC17
H2AC17
CBWD5
SLC18A3
CHAT
TMEM14B
CBWD3
TOX4
RAB2B
FGA
CBWD6
BCL2L11
PDE4C
DMAP1
LOC102724265
TMEM179
BIRC2
APOB
AATF
USP42
RBM45
PDE11A
CETN3
DEXI
CLEC16A
ZPBP2
IKZF3
PDE1C
FANCL
KCTD5
MAGOHB
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TUBGCP3
CTNNB1
SLC9A1
RUSF1
ETFA
STAT3
TMEM230
NDUFC2-KCTD14
NDUFC2
PMVK
LEAP2
DDX56
WASHC2C
ATIC
USP40
GOSR2
ACAD9
DNAJC25-GNG10
DNAJC25
RAB17
FUS
FAM222A
TOP3B
SNX18
SNF8
WASHC1
LYSMD3
AKAIN1
IDH3B
LOC112694756
TMEM248
H1-2
LCMT1
SCAMP1
ZNF296
GEMIN7
MNAT1
CHD9
ZC3H6
THNSL1
ATF2
AP3S1
RFC1
TMEM106B
DHRS2
POLR3G
MBLAC2
COPS7A
KNOP1
INSIG2
TTC30A
C20orf144
ACTL10
FAM163B
MIDEAS
NEUROD1
POLDIP3
SIRT4
SRP54
PCK2
TTC4
MDM2
NUP54
NDUFS7
PUM2
MTHFD1L
ZNF425
ZNF398
SEC24A
CYGB
SLC39A13
HPCAL1
NHLRC1
SNRPB
BRMS1L
GZF1
MRPL39
NET1
CABP7
CRH
RUVBL1
EEFSEC
TMEM101
STOML2
ACY1
NCL
TTC26
SREK1
ZNF843
WASL
CHEK1
BMS1
RPS15A
RRBP1
SMG1
BUD13
BCL6
METTL15
KIF18A
KRR1
ASF1A
SULT1A1
ABHD12
H4C15
H4C14
FN3K
PPP1R3E
SUMF1
RPS15
CLVS1
GORASP2
COQ9
CIAPIN1
SYN1
NOL10
CTDSPL
SLC35B2
PPP1R1B
KATNA1
LONP2
ABCC11
SPOP
FITM2
DNMT3A
G2E3
ETV4
NOP56
CLUAP1
C16orf90
NOC3L
SRSF2
MFSD11
MRPL21
IGHMBP2
FAM177A1
EFCAB13
BIRC5
TOB2
BIRC6
YTHDF1
ARMH3
MRPS25
RPS6
THAP4
ATG4B
NAT10
DCP1B
IL1R1
NFAT5
EIF2D
NID1
TDP2
ACOT13
ENTPD6
HAL
PIGO
CPT1A
ZSCAN9
GEMIN2
FAM207A
E2F6
AARS2
ERLEC1
ASB3
EEF1AKMT2
PCDH8
NOL11
CIBAR2
FBXL16
C16orf72
LGR5
EEF2K
TSGA10
EIF2B5
TBPL1
RBFOX2
VTA1
NMBR
TVP23B
TRDMT1
ADGRG6
ZADH2
TSHZ1
CBS
CPPED1
PIK3R3
TBC1D13
SH2D6
ISOC1
CTBS
NOCT
CD164
ESYT3
RBPJ
WDR45B
GPC6
TTPAL
TMEM39A
RNF149
HUS1
ZSCAN25
CYCS
SLX4IP
MKKS
DNAJB13
H2BC5
H1-4
GINS1
ZBTB4
SLC35G6
POLR2A
TUBB3
MC1R
NRSN1
MPHOSPH6
PLA2G15
TOB1
CDCA7
TTLL4
TAMM41
ATF7IP2
KIF16B
SARAF
SMIM3
NSRP1
EPHX1
RPTOR
FAM187A
EFTUD2
CCDC103
SCG3
UNC50
COA5
TRIM44
PRORP
PPP2R3C
MAP3K4
EDC4
PPP5C
AHCY
CNN3
TMEM212
CRLF3
HEXA
TAB1
C2orf42
ATG16L1
FSTL4
PBOV1
HINT3
LTV1
PRDX1
DDX18
RPL31
EPHX2
INHBE
RPL12
LRSAM1
CRLS1
MMADHC
TGOLN2
KHK
RABL2B
HBM
HBA2
APOL2
AKAP10
NGDN
ARFGAP3
GFM2
UTP3
TRIM33
LAP3
H4C11
TRIM67
C19orf53
SLC25A10
ARL6IP1
CCDC107
WFDC3
DNTTIP1
ATP5MC2
CLN5
ERCC5
HADHB
HADHA
MED15
SLC51B
CCNJ
ATP6V0A1
SCAMP5
OPRM1
ALG10B
MRRF
ANXA2
ZNF212
INHA
CEP350
COX20
PRKDC
MCM4
GTF2H2C_2
GTF2H2C
C10orf88
GMCL1
VARS2
SPATA2
KIAA1841
ARL14EP
PDHX
APIP
GSPT1
ZNF473
VRK3
CDK5R2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
TRIAP1
GCLC
BAIAP2
ATXN2L
THOC1
POLR3B
CCNL2
ATXN1L
WDR33
CIAO3
SUGP2
PSMC2
PRM1
NKD1
LYZ
DNAJC2
ARMC6
SLC39A4
CPSF1
SIK2
ZNF460
IMPDH2
ENO1
NBPF1
TMEM169
PECR
ADNP
P4HA1
TSFM
WASHC5
NSMCE2
ELK4
APOA1
TRIM48
C6orf62
SRFBP1
KMT2D
CD320
RHBG
IPO13
FCRLA
FAHD2A
DCAF8
CSF3R
TPH2
NUS1
MUC5B
TF
WDR35
PRRC2B
MACC1
ITPR1
PIGF
CRIPT
AIFM2
DPH7
ZNF22
RNF144A
EVI5
PTDSS1
MTERF3
RRN3
CCT2
POLR3D
SCGB1C2
SCGB1C1
COX16
TIMM22
RFXANK
BORCS8-MEF2B
BORCS8
ZNF354B
WASHC2A
RMDN2
NARS1
NUDT15
NUP85
CHIC2
H4C3
H1-6
ZNF451
FAM133B
FAM53C
CDC25C
FAM162A
CCDC58
PLAG1
LTBR
CHCHD7
CCN2
AGPS
ID1
ABCB6
MOGAT1
PPIL3
NIF3L1
HPN
F2
ATP6V1B2
KIAA1958
C9orf147
POLR2C
RARS1
TTI1
RPRD1B
SUN2
TBL3
PCF11
MRPL16
SPON2
USP18
TCAIM
RAD54B
FSBP
ZNF503
MARCHF8
NAA20
TOMM5
H4C4
OXA1L
KRI1
CDKN2D
CUL7
RAB10
ATP2B2
UGT2B10
ABHD10
CLK3
TEX2
SEC14L4
RPUSD4
MST1L
H2BC6
FAM118B
SPTSSA
TRIB1
LSM12
G6PC3
CTNNA2
PCNX4
ZBTB9
GCHFR
CTSH
RTN2
PPM1N
FOXN2
ATXN7L2
BCL7B
TINF2
FEM1C
MARCHF7
LATS1
MAPK11
PUS10
PEX13
GXYLT1
RGPD8
RGPD5
TUFM
SH2B1
ATRN
TNFRSF21
IL1RN
TUBB2A
FUT5
CHD8
ILF3
USP36
SC5D
PALB2
DCTN5
SRSF6
CRNKL1
CFAP61
PNPT1
METAP1D
SLC38A2
C16orf46
OR6B2
NDUFA10
CASC3
FANCA
ARHGAP40
PGAP3
ERBB2
ZBTB3
TENT4B
C12orf65
CHGA
AP3B2
SNX5
MGME1
NMS
TRPC4AP
PIKFYVE
SCNN1G
MIEN1
BRF2
DSN1
FASTKD1
SURF6
SLC25A26
IL9
ZNF23
WDR43
SLC37A4
SLC24A1
UTP4
DERPC
CHTF8
SPRED2
HEXB
PCID2
CUL4A
DGUOK
PXT1
KCTD20
ATP5MC3
CGGBP1
RPS8
C3orf38
SLC6A11
IREB2
ACSL6
ERMARD
NSG2
TATDN3
NSL1
AASDH
LRRC57