ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10921876 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◣ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

DUX4
FAM227B
DTWD1
PSMD6
BMP7
SPPL2A
BCAS3
AP4E1
TRIM37
NPAS4
ARFGEF2
TMOD3
FAM214A
FRG2C
HEATR6
POLR2J3
USP32
LYSMD2
TEX14
RAD51C
BRIP1
ALKBH2
UNG
FAM72C
FAM72D
FBXO32
USP8
MYO5C
C8orf33
ARPP19
BCAS4
CA4
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP13
BRD9
CRBN
FAM72A
PFDN4
TRPM7
ZNF217
PARD6B
HTR5A
PPM1D
GABPB1
XKR7
APPBP2
SLC12A9
MAPK6
FANCD2
CPLX2
CEP55
SLC27A2
MYO5A
SGO1
KIFC1
IMP4
CCDC115
NEIL3
TSR3
GNPTG
PDE4DIP
NTAQ1
IQSEC3
VPS50
HEPACAM2
TUBD1
RPS6KB1
DCLRE1B
AP4B1
PIGX
CEP19
SENP5
SUMF1
TTC24
IQGAP3
SKA3
MRPL57
WIPI1
OAZ3
TONSL
KLHDC4
RRP15
CCNA2
TMOD2
ZNF212
DYNLRB2
DMXL2
ATXN7
LEO1
SKA1
BUB1
CPEB4
STX16
C12orf66
RMND5B
NAGPA
HIPK1
ARHGEF5
WASHC5
NSMCE2
KIF14
UTP20
EEF1AKMT3
METTL1
CYP27B1
GNG14
FBXW9
TSFM
SLC25A40
DBF4
DEPDC1B
WDR53
FBXO45
HAGH
FAHD1
MCM7
AP4M1
SEBOX
TMEM199
POLDIP2
RBM48
PEX1
TACO1
TMEM41A
RFC3
PLK1
UBE3B
KCTD10
SNAP25
ATAD2
EIF2D
NOTCH2
KIF18B
SPDYE14
SPDYE10P
CASTOR2
MCM10
AURKB
TMEM183A
NUB1
GTF2H3
EIF2B1
WDR62
THAP8
RNF166
CTU2
BARHL1
FAM72B
XRCC2
COX6A1
TRIAP1
TECPR1
UBE2C
CCND3
HES1
DSCC1
CPSF1
SLC39A4
HSF1
BOP1
NCOA3
TXNRD1
WDR74
STX5
RABL2A
THOC3
GNAT3
TICRR
ZNF282
POLQ
PLCG1
RAD18
PGBD5
MYL12A
MYL12B
SPNS1
LAT
PKMYT1
ADAT1
MIS18A
GTSE1
PARPBP
NUP37
METTL2A
METTL25
CCDC59
WDR72
CYP27C1
VARS1
C6orf89
PPIL1
ITPRIPL1
NCAPH
TRMT61A
CKB
POLR3H
RPLP1
PRDX2
RNASEH2A
STAT1
MTRNR2L2
MSH3
DHFR
GNB5
BCAS1
MYBL2
ZNF3
COPS6
SMIM17
PREX1
TPRN
TMEM203
NDOR1
KPNA2
COMMD4
QSOX2
NUDT4B
NUDT4
PCLO
P2RY2
ZNF778
WDR81
TRIM33
FRG2
TDRD7
TMEM262
ZFPL1
CDCA5
RANGAP1
RRP1B
HSF2BP
ZNF688
ARL4D
KLK13
MAST1
RTBDN
NRAS
GPR89A
MUC12
SAP30BP
RECQL5
ART1
DPY19L4
URB1
NHP2
AARS2
PRCP
DDIAS
AGFG2
RAD54B
SMYD5
SHCBP1
PCOTH
MIPEP
C1QTNF9B
PC
PAK2
USP30
VPS11
C8orf76
SVOP
TBX2
SMG8
POLR2J
NUF2
BLM
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
NUP107
SRI
BIRC5
TBRG4
SPATA25
CTSA
NEURL2
ZSWIM1
LAMP1
KRR1
DZIP3
CIP2A
SPC25
RECQL4
LRRC14
LRRC24
MFSD3
NOL8
CENPP
SIKE1
LRWD1
ALKBH4
CENPM
ESCO2
CCDC25
FAM83D
CCDC200
GCSH
GTPBP10
VIRMA
PUS7
RINT1
CENPH
GPR89B
ATP13A3
MGAT1
ZAR1L
BRCA2
ZSCAN25
LOC102724770
DGCR6
FANCI
ABCF1
NOC4L
DDX51
NOM1
SPATA33
CENPA
NDUFAB1
CYB5R1
ADIPOR1
ACSF3
IPO11
DIMT1
FBXL13
ARMC10
EEF1E1
APRT
CDT1
HCFC2
GLT8D2
DSTYK
MTMR11
SF3B4
SV2A
TRMT1
NACC1
TPH2
TOMM22
ZWILCH
SNAPC5
RPL4
SEC13
CENPBD1
ZEB1
ZMYND8
TPX2
JUNB
FRAT2
HOOK2
TFRC
PCCB
POLR3GL
ANKRD34A
LIX1L
KDM5B
RBSN
CLCN7
WDR4
DIAPH3
MON1A
RBM8A
PEX11B
CFAP69
SENP2
CKAP2L
UNC50
COA5
N4BP3
PRSS16
DHX40
NCBP2AS2
NCBP2
EMC3
SLC7A5
CBLL1
PSMD4
CWF19L1
RAD51
PLEKHM3
TPRA1
BCAS2
MRPL3
POLR2K
SPAG1
POU5F1
TCF19
CCHCR1
FBXO43
MBTPS1
LSMEM1
MRPL27
EME1
LOC101928764
BNIP1
PTPRH
TBC1D31
TSPAN10
NPLOC4
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
NET1
TUBAL3
POC5
SNRPD1
TIPARP
NPIPB15
DNAJC30
BUD23
RNF40
CCDC189
INPP5K
MPHOSPH6
ECT2
SH3BP5
CD36
RBM28
IFRD1
EXOSC5
BCKDHA
NBPF15
MRPL21
IGHMBP2
DLGAP5
MRPS21
SYT5
TMEM168
DUS2
DPEP2NB
DDX28
DBNL
ZFYVE21
XRCC3
H3C15
H3C14
H2AC19
H2AC18
H4C14
ATXN1L
TSPAN19
LRRIQ1
ASF1B
USP39
C2orf68
RNF181
TMEM150A
ZHX1-C8orf76
ZHX1
ERAL1
TERF2IP
KARS1
SYPL1
LAD1
WASHC2C
DNASE2
KLF1
GCDH
XRN2
PDE6D
COPS7B
HROB
MSTO1
GINS2
METAP1D
VPS33A
UTP15
ANKRA2
HSDL1
DNAAF1
CFDP1
TCTEX1D2
PIK3IP1
CERK
SRGAP2
PNPLA8
TRAIP
FAM222A
RCE1
TRIP4
PCLAF
LRRC37A3
C7orf50
LEKR1
RRP12
GEMIN4
MTMR12
KIAA0895
ANLN
CCDC150
RUBCN
FYTTD1
CHD1L
PRKAB2
GET3
GSTP1
H4C15
C17orf97
VGLL4
CRNKL1
CFAP61
INKA2
DDX20
METTL18
C1orf112
NBN
VRK1
MRPS35
TMED5
CCDC18
NDUFV1
DEPTOR
MDM4
KLF10
RNF115
POLR3C
SSR3
RAD54L
PIGU
TIMM23
MKS1
YIPF4
PBK
PABPC1
MRPS14
TRMT61B
BCAR1
EIF3C
EIF3CL
NAGK
ASNS
WDHD1
SOCS4
KCNJ14
GRWD1
NDUFAF6
CCNE2
UNKL
GPAM
DTX2
CCNB2
MND1
SSNA1
ANAPC2
RAB37
TWF1
APPL2
ZNF706
DYNC2I1
SLC25A26
CDK1
EMC8
COX4I1
POLR3F
DZANK1
RAC3
DCXR
TMEM120B
NBPF11
FA2H
MAD2L1
KAT2B
BRMS1
RIN1
PARL
LONP1
CATSPERD
B4GAT1
EIF3E
ZMAT3
CEBPZ
MCM3
SMPD4
MZT2B
DDX11
TASOR2
CRY2
SPDL1
VHL
ZNF316
RNF13
ADAM22
TAMM41
LMTK2
FRAT1
VWA8
PRPF40B
PSME3
BECN1
GOSR2
PSMG2
CEP76
MIS12
DERL2
PRMT6
HEXA
STIL
MAPK8IP2
PHTF1
ISY1-RAB43
ISY1
CLPTM1L
GLI4
PHAX
ALDH7A1
WDR83OS
WDR83
MAN2B1
PDE4C
TRUB2
COQ4
MRPL4
PGAM5
FOXN4
TMEM249
SLC52A2
FBXL6
VARS2
GTF2H4
UFSP1
ACHE
E2F1
TMEM44
BCKDK
KAT8
RPL39L
BOLA2-SMG1P6
ATG14
ECSIT
CNN1
RAD9A
PPP1CA
RIOK3
MRPS36
LRRC58
LNPK
PWP1
MRM3
GLOD4
POLR1F
DBNDD2
TMEM258
FEN1
MZT2A
THOC7
EFNA5
NUFIP1
GPALPP1
ATR
SNRPE
PELP1
ARRB2
PPIP5K1
CKMT1B
MIS18BP1
DUSP23
PAM16
CAPN7
KDELR2
TADA2B
CCDC96
IQCG
CNPY3
LMLN
RPL35A
DUS4L-BCAP29
DUS4L
COG5
COQ2
RAB22A
GLRX2
TRIB1
GPATCH4
NAXE
GDAP1
RABIF
ZSCAN2
STOML1
PML
ZNF276
VPS9D1
FAM185A
ATP6V1G3
SGO2
NDUFS7
RPSA
ZNF771
CRLF3
ATAD5
HEATR5B
GPATCH11
ZHX3
SART1
ASCC2
ARMC8
ERN1
OVOL2
MARCHF8
NKIRAS1
OPA1
NR1D2
INTS8
SYTL2
GTPBP4
SRA1
SLC35A4
APBB3
C12orf45
ZNF718
ZNF595
ATG7
GINS1
ZNF789
ATP5MF-PTCD1
ATP5MF
U2SURP
BOLA3
NMD3
RNASEH2C
KAT5
MRPS16
DNAJC9
C1orf54
APH1A
NARF
CYBC1
EIF3H
ZER1
CYB561
ACAP2
ARRDC2
MAFA
RTF2
SCRT1
DGAT1
ABCC6
ELAC2
CLNS1A
NOMO3
DLD
EZH2
GNAS
TIFA
CPNE7
RRM2
RABL2B
DDX46
EIF3F
BOLA1
FBXO5
NKX1-1
ZFAND2A
TAF5
TMED9
B4GALT7
RMI2
SQLE
UMPS
EXOSC6
TATDN2
POLA1
SHC1
FLAD1
CKS1B
BRIX1
RHBDD2
METTL2B
NAA25
XPC
LSM3
PPP1R11
POLR1H
TP53RK
SLC13A3
PMPCA
ENTR1
MRPL11
TDRKH
NOL12
NAMPT
EIF3L
ANKRD54
SLC29A1
MYMX
RUVBL1
SH3BGR
LCA5L
NOP16
HIGD2A
TFPT
PRPF31
GDI2
RTKN2
PSMG3
POLE2
KLHDC1
RBM19
NEK2
NUDT15
C5orf51
KLHL20
MCM5
TARS2
XPO4
EPG5
FAM91A1
NOL11
VPS29
RAD9B
NR3C1
UNC45B
NLE1
ATP6V1C1
PHF5A
ACO2
ZDHHC6
VTI1A
ESYT2
GSTO2
KLHL12
SF3A1
CCDC157
PDIA4
COMMD2
UBXN7
MRPS25
NBPF12
ZGLP1
FDX2
HASPIN
PIMREG
AIPL1
TOM1
RGS14
LMAN2
C2CD5
SPSB3
NUBP2
MRPS34
EME2
TEDC2
PHLPP2
NME3
RRM2B
MRPL2
KLC4
CUL7
DLST
PRKAG2
SSBP1
WDR36
VPS35
FKBP3
FANCM
DOK3
DDX41
PSMC2
DNAJC2
NUP42
PRPF18
PMPCB
ANKRD46
BHLHE40
CYB561D1
LSM5
AVL9
NOXO1
TBL3
RPS2
RNF151
RPLP0
GCN1
PFAS
CTC1
CD55
NUP160
TATDN1
NDUFB9
CRY1
WIPI2
FBXL18
RNF168
CHRNA5
ZFP36L2
DEK
TRAM2
EVL
RFNG
GPS1
LRATD2
PROC
INPP4A
RTN4RL1
DPH1
SUGP2
ARMC6
ESPL1
ZNF398
HNRNPH1
EXOSC9
ZNHIT1
PLOD3
AP3B2
ELP5
CTDNEP1
GABARAP
MTBP
MRPL13
LRCH4
FBXO24
C16orf46
RNFT1
NXT1
VGF
ROMO1
DMTF1
PPP1R15B
CCNB1
KIF20A
BRD8
EDC3
RAD51AP1
C12orf4
CDK5RAP1
PEPD
FOXH1
PPP1R16A
FAM166A
CELF1
STPG3
NELFB
RELB
PTPMT1
TROAP
KIF23
DYRK1B
STX6
ZNF451
CCDC97
SLC25A24
SGTB
NLN
ERO1A
CDYL
PLSCR4
GATB
TMEM242
TSEN2
PDXDC1
REXO5
ERI2
SFSWAP
TOP1MT
SFI1
EIF4ENIF1
TBK1
FAM24B
BMT2
SECISBP2
CKS2
WDR43
CLCC1
RPTOR
CEP135
KNOP1
ASPM
TEKT2
ADPRS
FAM180B
NDUFS3
KBTBD4
TMEM109
PRPF19
RIPK2
GTF3C3
C2orf66
SLC25A25
CYREN
NAIF1
NAPEPLD
WASHC2A
UFD1
CDC45
UBFD1
EARS2
CKMT1A
PPIB
SNRPC
UBE2N
MYO7B
IWS1
AMDHD2
ATP6V0C
E2F7