ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116421 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◣ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

KIF5C
MTRNR2L9
MAMDC2
RGPD1
RGPD2
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L10
EMILIN2
NGB
TRIM48
MTRNR2L6
C1orf198
MTRNR2L1
ACSL3
KRT36
KRT35
SCML1
DUX4
MUC3A
APBB2
PTPRN2
UTP20
FBXO5
NPAS4
TMEM216
EPN1
RTF1
OR2T1
MTFR2
SNX16
WDR74
STX5
SKIDA1
DNA2
FAM72B
FAM72C
FAM72D
CCNA2
IL32
KIAA0895
ANLN
NEK2
SEMA3D
CCNB2
EXO1
UNC45B
NLE1
AMY2A
RRP15
KCNJ14
GRWD1
RBM19
NCLN
S1PR4
XRCC2
NKX1-1
RAD51
TTC24
IQGAP3
FAM72A
GAS8
TRMT1
NACC1
DPH2
B4GALT2
ATP6V0B
ART1
VARS1
ASPM
TTC27
TICRR
KLHL18
KIF9
INTS7
DTL
SGO1
RRP12
CCNB1
PWP1
ACTR6
ALKBH2
UNG
SMTN
RRM2
TROAP
HTR5A
C16orf71
ANKS3
CKAP2L
UTP25
NUF2
EDC3
LIN28A
AURKB
TRIP13
BRD9
KIF2C
UFD1
CDC45
ZC3H18
SMYD5
BUB1B
QTRT1
MAST1
RTBDN
SPTAN1
DZIP3
CIP2A
KAT2B
BLM
NUP214
STIL
WDR4
ACOX3
ESCO2
CCDC25
KNL1
BRCA1
ARHGAP11A-SCG5
ARHGAP11A
CDC25A
CDC6
IREB2
SCFD2
SHCBP1
CFAP299
ITPRIPL1
NCAPH
KIF18B
SUMF1
FANCI
EBNA1BP2
CFAP57
SUPV3L1
DUS3L
PRR22
METTL15
KIF18A
FANCD2
KIF20A
BRD8
PRCP
DDIAS
TTK
RAD54L
POU2F1
TTLL9
DUSP15
C12orf43
EEF1AKMT3
METTL1
CYP27B1
LMLN2
CEBPE
METAP1D
PLK4
FRG2C
THADA
PPIL2
TOMM40
KIF15
KIAA1143
CDCA8
C1orf109
H4C2
H2AC4
H3C2
MAD2L1
HMGB1
CRNKL1
CFAP61
ARL4D
LOC102724770
DGCR6
CCNG2
BIRC5
CCDC86
SLC12A9
STAT1
RABL2B
NAGPA
WASHC2C
BCAS3
TMEM262
NME1
CCT2
C12orf66
NOTCH2NLC
URB1
ZFPL1
CDCA5
TM9SF1
IPO4
VPS33A
SKA3
MRPL57
GNG14
CCDC200
POLR2J3
NEIL3
SLX1B
SLX1A
BOLA2B
FBXW9
WASHC2A
DHX37
BRI3BP
BOLA2
MCM7
AP4M1
NOTCH2NLB
NOTCH2NLA
SULT1A4
SULT1A3
LTV1
SHC1
CDK7
PSME3
BECN1
RIPPLY2
CYB5R4
FLAD1
CKS1B
NOL6
BOLA2-SMG1P6
FRG2
HEXA
XKR7
COL23A1
NOL8
CENPP
MOK
C16orf46
SKA1
CORO1A
KPNA2
GTF2H3
EIF2B1
RABL2A
CEP135
RTN4RL1
DPH1
PPAN-P2RY11
PPAN
ANGPTL6
TRMT6
MCM8
TMEM186
PMM2
PDE4DIP
IPO11
DIMT1
P2RY11
SPNS1
GPATCH4
NAXE
NAT10
LAT
EXOSC5
BCKDHA
TRIM37
MIS18A
MRPL27
EME1
NBPF1
ZMPSTE24
TBRG4
DYNC2I1
SECISBP2
CKS2
IQSEC3
SPATA25
CTSA
ATP6V0D1
AGRP
POLQ
NEURL2
NUDT15
WASHC5
NSMCE2
RNF166
CTU2
TRIP4
PCLAF
TTF2
ZSWIM1
GTF3C4
DDX31
TRUB2
COQ4
SMC2
TMEM248
RNF40
CCDC189
NDUFAF6
PIGU
KNOP1
POLR1B
DLGAP5
SPCS1
GLT8D1
ELOVL1
CDC20
CYB561D1
HAGH
FAHD1
USP2
UBFD1
EARS2
NOP16
HIGD2A
PBK
CCNE2
HCFC2
GLT8D2
KCTD9
CDCA2
NUDT2
KIF24
PMS2
AIMP2
NOL7
MCM10
TRMT61A
CKB
HEATR1
LYRM4
FARS2
SLC25A26
HEATR6
TMCO2
VTA1
NMBR
UBXN11
CPLX2
PRR5L
POLR3D
KIF23
KIFC1
RPP40
PSMD6
CENPW
DNASE2
KLF1
GCDH
CDK1
TUBD1
RPS6KB1
WDR46
RGL2
PFDN6
POC5
GPN2
GBA
DHX40
LRRC29
PNO1
COMMD9
DYRK1B
DNAJC25-GNG10
DNAJC25
GPATCH3
URB2
TAF5L
ZNF778
ATR
RDH5
SNRPE
GTSE1
PUM3
SGO2
DUS2
DPEP2NB
DDX28
TAF13
TDRD7
MDN1
SLC35B2
UBE2C
TFB2M
CNST
DDX11
H3C15
H3C14
H2AC19
H2AC18
H4C14
CSTF1
AURKA
DDX49
COPE
IMP4
CCDC115
SSBP1
EIF3C
DDX21
ZNF497
A1BG
PCOTH
MIPEP
C1QTNF9B
NOTCH2
TSFM
EIF2D
ODF2
FAM227B
DTWD1
MYBL2
RNASEH1
UTP4
DERPC
CHTF8
TADA2B
CCDC96
COX6A1
CBWD5
EIF3CL
HSP90AB1
SHQ1
TTC26
MAK16
MRTO4
EMC1
SASS6
ITGA7
BLOC1S1
TRIAP1
DDX19A
COG7
ZNF358
HM13
TDG
C12orf73
WFDC3
DNTTIP1
PNPT1
MCOLN1
WIPI1
TRMT61B
BUB1
WDR62
THAP8
PUS1
ADHFE1
LSM12
G6PC3
C6orf89
VAC14
ZNF331
GATB
RBM28
ATG14
DCLRE1B
AP4B1
CBWD3
SRPRB
GFM1
CEP55
PBRM1
GNL3
RRS1
CASP8AP2
UTP15
ANKRA2
C5orf51
RNF187
LOC101928764
LAMP1
CREBRF
ZGRF1
LARP7
ARMC2
FBXL13
ARMC10
MND1
RTTN
THOC3
ZFYVE1
TRMO
TRIP12
PGBD5
FBXO36
TRAPPC6A
BLOC1S3
LSM5
AVL9
CENPS-CORT
CENPS
DIAPH3
DBNL
RHEBL1
MRM3
GLOD4
NOL10
ZNF688
MFSD1
PAXBP1
H4C15
PPRC1
NAGK
PCNA
IARS1
KDM5B
TTLL11
LZTS2
TFIP11
NEMP1
PINX1
TMEM242
DYNLRB2
FAM53C
CDC25C
ITGB3BP
EFCAB7
KLHDC4
OGDH
RAD18
GSN
CEP43
RBKS
BABAM2
HSPA9
CHCHD1
TWNK
MRPL43
DYNLL1
MARCHF8
NPM1
TSR3
GNPTG
SNRPD1
ECSIT
BBS5
DHODH
TSEN54
PKD1L3
ENDOV
KMT2D
VRK1
PRMT2
ASF1B
TASOR2
ATAD2
ZGLP1
LLGL2
FDX2
OIP5
NUSAP1
CASKIN2
XRN2
FARSB
TMEM230
MRPS23
SYNJ1
USP32
MRPS35
MAPK8IP2
FZR1
CFAP298-TCP10L
CFAP298
DDX42
CCDC47
PRMT1
QTRT2
CCDC191
CASC3
DOHH
SETD4
CBR1
CLSPN
MRPL3
CRBN
RTEL1
E2F3
RCL1
ANAPC10
ABCE1
CNN1
CBWD6
RAB14
KCNIP2
CFAP410
YARS1
S100PBP
WDR36
GTPBP4
COMMD4
LTN1
RUVBL1
BARHL1
SRA1
HMGB2
TTLL4
POLR3F
DZANK1
CCDC146
AEN
IFT46
ARCN1
VPS50
HEPACAM2
PSMD9
HPD
SLC25A51
ZBTB9
CAMTA1
RFC3
LRRC59
CDS2
MVK
INSM2
UBE2Q1
NRL
CHRNB2
STK11IP
RIOK1
CAGE1
DHRS11
AP5Z1
IFT57
AGFG2
SLC35A4
APBB3
RRP1
FAM200B
NDUFS7
CMC2
CENPN
ZAR1L
BRCA2
ZNF593
C1orf232
MARS2
NOC4L
DDX51
SUGP2
ARMC6
USP30
PARD6B
AXDND1
NTAQ1
ZSWIM8
RPUSD4
FAM118B
INO80
HSDL1
DNAAF1
RPIA
HIPK1
MMUT
CENPQ
CDC37
NRAS
ARFGEF2
STMN3
TEKT2
SECISBP2L
ADPRS
RTF2
UBA52
PISD
CCDC77
MRM1
SEBOX
MRPL4
PARPBP
NUP37
MKI67
USP39
C2orf68
RAD51AP1
C12orf4
PPIH
L1CAM
STYXL1
MDH2
C8orf33
TAF4B
ATP6V1C1
MPHOSPH10
MCEE
CPEB4
LARP4
FAM186A
FBXO32
SLBP
TMEM129
TACC3
BRSK1
TFPT
PRPF31
HSPBP1
GNL2
PIP4P1
ESPL1
CCDC116
GMNN
TSEN2
TIPARP
NUP107
CENPM
PFDN4
PDE8A
TOMM22
RPSA
TMEM199
POLDIP2
GLRX5
ZSWIM9
LIG1
RNASEH2C
KAT5
SLC37A1
ZWILCH
SNAPC5
RPL4
SKA2
PRR11
GTPBP10
EEF1E1
RHNO1
FOXM1
ZBTB17
TMEM231
PDXDC1
ABCF1
TSN
SEC14L1
SLC39A6
ELP2
TIMELESS
MIP
SCRT1
RPS29
UBN2
UTP23
FBXW8
DHX33
NBPF15
RAD9A
CWC25
OSGEP
APEX1
KLHL32
RRP36
MEA1
MED20
BYSL
DGAT1
C12orf45
VPS35
NUP35
GAR1
SOD2
RNMT
POLR2K
INKA2
FAM210A
PRKAR1B
CNKSR1
YIF1A
TMEM151A
MTR
RNF181
CELSR3
SKIV2L
NELFE
TMEM150A
STX18
PTRHD1
CENPO
REXO4
ADAMTS13
SSNA1
ANAPC2
FAM174A
OXNAD1
DPH3
ADK
PPT1
ARID3B
ADAT1
DNAH7
SAR1B
YDJC
DDX20
NET1
WDR43
UNKL
PHB2
LAP3
IQCG
TXNL4A
DCAF11
SDAD1
WWP2
NOB1
SLF2
PPIL1
XPO5
POLH
AP3D1
TRMT5
SLC38A6
TIMM23
FAM187A
EFTUD2
CCDC103
POMZP3
LRRC73
LARS2
ZNF23
TOR1A
PACRGL
TIMM23B
PARG
REXO5
ERI2
ADPGK
WDR61
IQCH
AAGAB
TEX14
RAD51C
SRD5A1
NSUN2
ZBTB49
LYAR
RGS20
STAM2
PWP2
LOC102724159
ASNS
PPP1CA
KIF14
SLC25A1
WDHD1
SOCS4
METTL3
PC
GDAP1
DHDDS
PLK1
ZNF202
NOXO1
TXLNA
PDE6D
COPS7B
PALB2
DCTN5
FKBP3
FANCM
SLC35C2
OXSM
NGLY1
ZNF529
CNPY3
LSG1
RBM48
PEX1
CLTC
ATXN7L2
NEU1
BRIP1
SF3A3
RANBP6
KIAA2026
LMLN
YIPF3
POLR1C
GPD1
COX14
SPG21
CFDP1
CARS1
ROM1
EML3
B3GAT3
APPBP2
ATP6V1H
DDX18
POLR1F
SPC25
SPAG1
SUPT7L
SLC4A1AP
C6orf47
RSPH1
TTC7A
MCFD2
FAM180B
MAD1L1
TMED5
CCDC18
TMEM167B
CNOT4
STAT3
LAMTOR5
NPIPB15
DBNDD2
MIER1
DNAI4
NCL
EIF2S1
ATP6V1D
NUDT1
MRM2
HSPH1
NDUFS3
KBTBD4
MRPS16
RPF2
TOM1L2
DRC3
WDR81
TRIT1
EIF2B3
CSE1L
CEP162
SHOX2
PLEC
E2F8
FKBP1A
HASPIN
SARS1
DNAJC9
LRP2BP
PPP1R10
MRPS18B
ATAT1
CRCP
TCTN2
SLC25A32
DCAF13
PUS7
ASH1L
ANKRD37
SPTLC1
KLHL12
WDR3
GDAP2
EBAG9
ATP5F1E
SPATC1L
NOLC1
MON1A
SMIM41
EIF4H
PIMREG
POLE3
C9orf43
ALAD
UBIAD1
STX16
NUDCD3
ERLIN2
TBL3
RPS2
RNF151
CENPF
DBF4B
WDR53
FBXO45
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
BRMS1
GABARAPL2
ZNF718
PDF
NIP7
COG8
KTI12
QSOX2
MAP3K7
TSGA10
CDK5RAP1
BRIX1
GGNBP2
RPL6
PTPN11
SPRYD4
CDKN2C
SLF1
KIAA0825
ZSCAN22
KDM5A
FAF1
APOM
SMC4
IFT80
NHP2
TAF10
RIOK3
PABPC1
KIAA0895L
INTS12