ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

MAMDC2
DUX4
BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
BRIP1
ARFGEF2
ZNF217
TTC24
IQGAP3
PFDN4
EEF1AKMT3
METTL1
CYP27B1
TSR3
GNPTG
BCAS4
USP32
MOK
ALKBH2
UNG
DYNLRB2
HIPK1
SUMF1
SNX16
XKR7
TRIM37
FBXO32
APPBP2
SLC12A9
ARL4D
FBXO5
FAM72C
FAM72A
MCM7
AP4M1
CCDC200
TEX14
RAD51C
PPM1D
SKA3
MRPL57
NCOA3
NAGPA
SMYD5
COL23A1
PHTF1
C3orf14
FRG2C
VPS50
HEPACAM2
CSTF1
AURKA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SFSWAP
DHX40
C8orf33
C12orf66
SAP30BP
RECQL5
CA4
SCRT1
DGAT1
BARHL1
EPN1
CREBRF
CCT2
CRBN
UTP20
RAD54B
NOTCH2
MUC3A
TRIM33
YPEL2
PTPRN2
CNOT3
HSDL1
DNAAF1
WDR4
RMDN1
CPNE3
TCTN2
HSF1
BOP1
FANCI
RUVBL1
HCFC2
GLT8D2
PGBD5
ATG14
NBPF15
HTR5A
ITPRIPL1
NCAPH
SPATA25
CTSA
NEURL2
ZSWIM1
IQSEC3
ART1
MCM10
SLC37A1
RSPH1
RAE1
MTRNR2L3
NUP214
TROAP
SGO1
ATXN7
THOC7
CPLX2
RNF166
CTU2
CEP128
RRP15
ZNF331
CCNB1
PPM1E
LOC102724770
DGCR6
TOMM70
LNP1
RAB22A
ZFYVE1
CLTC
TRMT61A
CKB
DDX42
CCDC47
TTK
FAM214A
PUF60
ZFYVE26
RAD51B
NGDN
SMG8
ATXN1L
TTF2
NCKAP5L
DYRK1B
SMIM41
ATG101
SLC45A3
CCNA2
BIRC5
TADA2B
CCDC96
MED20
BYSL
YIF1A
TMEM151A
POLR2J3
CCNG2
KCNJ14
GRWD1
TRIP13
BRD9
DYNC2I1
VARS1
KLHDC4
SPPL2A
RNF40
CCDC189
MAX
INCENP
CYB561D1
DCLRE1B
AP4B1
FBXL3
XRCC2
C16orf46
KAT2B
INSM2
FAM72B
DDX11
TRIM48
VRK1
SKA2
PRR11
MAD1L1
NUDT1
MRM2
FAM91A1
FRG2
USP10
LOC101928764
NAA25
STOML1
PML
ANGEL1
SPTLC1
UBE3B
KCTD10
TUBB3
MC1R
TTLL11
GMCL1
AEN
NUP107
SART1
C16orf71
ANKS3
LRRC29
MFSD1
CENPBD1
MRPL52
MMP14
NEMP1
EBAG9
EIF1AD
CST6
BANF1
ECT2
TMOD3
SLC35A1
NOL8
CENPP
L1CAM
ZC3H18
SAXO2
EFL1
RNFT1
ZEB1
TTC27
UBE2C
TASOR2
CBLL1
NDUFAF6
CCNE2
VGF
AP1S1
WASHC5
NSMCE2
POLR2K
METTL3
SPAG1
GFOD2
PPM1B
ANKRD46
LYSMD2
TMOD2
SKIV2L
NELFE
CORO7-PAM16
CORO7
DNAJA3
TDRKH
HMGCS1
MAPK8IP2
CHUK
TACO1
TRIM4
RABL2A
RPP40
HAUS7
CCDC146
RRP1
SIKE1
AUH
DDX49
COPE
MOCS3
DPM1
TF
ARFGAP1
TOPBP1
EDC4
PTGFRN
ACOX3
TRMT61B
ATAD2
USP39
C2orf68
RNF181
TMEM150A
FIS1
CLDN15
PRKAR1A
SLC25A40
DBF4
DHX37
BRI3BP
TTLL9
DUSP15
NUB1
SYVN1
FANCD2
DLGAP5
RHEBL1
KMT2D
MKI67
INTS1
EXO1
MAST1
RTBDN
TOMM22
RRP36
MEA1
NET1
TUBAL3
EMC9
RNF31
PSME2
TPTE
TAF5
COQ10A
ANKRD52
SF3B3
COG4
SLC15A4
KIFC1
RACGAP1
PPP1R12B
UBE2T
AP4E1
POLR2J
CYP51A1
HAGH
FAHD1
NKX1-1
UTP23
MCCC1
AMZ2
ATG7
EIF3H
PDE4DIP
SUPT7L
SLC4A1AP
FAM180B
NDUFS3
KBTBD4
ASNS
STX16
C20orf27
GSKIP
ATG2B
TBC1D13
STRN3
AP4S1
DDX19A
DSCC1
SLC35B1
ZHX3
FOXH1
PPP1R16A
TBX2
GUSB
OSGIN2
ASPM
KIF14
ZFAND2A
INPP5K
PSMC1
RGS14
LMAN2
ADAR
HOMEZ
LCMT1
VANGL1
SGO2
EIF2D
LZTS2
TWNK
MRPL43
TCP11L2
SLC25A26
ANAPC7
KLHL24
DUS4L-BCAP29
DUS4L
COG5
NOL6
EIF3C
EIF3CL
THOC3
ATP6V1C1
POLE3
C9orf43
ALAD
VIRMA
ZC3HC1
SLC25A24
RABL2B
GTF2H3
EIF2B1
SNRPC
ZC3H3
TDRD9
ATP5MPL
SPG7
CDCA4
EEF1E1
RPGR
BICDL1
EFCAB6
U2SURP
TRAPPC10
SRPK2
RFC3
POU5F1
TCF19
CCHCR1
NDE1
MARF1
MED13
BMP7
NTNG1
DDX21
TSFM
PEPD
METTL2A
PMF1-BGLAP
PMF1
DNAJC21
GNA13
CSDE1
LEKR1
TM9SF1
IPO4
ARMC2
GOLGA5
CKAP5
AFTPH
GDPGP1
CIB1
UNK
H3-3B
C8orf76
PSEN1
KIAA0895L
ZHX1-C8orf76
ZHX1
RHBDD2
EXOC3L1
E2F4
AZIN1
NANS
ELMO3
IARS1
ESPL1
RFC2
SSBP2
CYP2W1
TERF2IP
KARS1
CNIH4
COX19
ATP5MG
H1-10
MIS18A
DNASE2
KLF1
GCDH
PDXDC1
ZNF529
TBC1D30
GNS
PDSS1
URM1
ARPP19
MYL5
ATP5ME
GLRX5
FRAT2
TBC1D23
NME1
KIF18B
DZIP3
CIP2A
POLQ
FZR1
DOHH
SPC25
METTL25
CCDC59
MRPL11
TIGD5
EEF1D
PRPF18
CPSF1
SLC39A4
FBXO33
NUDT3
KPNA2
CMC2
CENPN
MDM1
GTPBP4
RTF2
C1orf54
APH1A
MXD1
TMEM18
GFPT1
DNAAF4
GLE1
HEATR5B
GPATCH11
MBTPS1
ROPN1L
CCDC15
RSL24D1
IDH3A
SQLE
SMARCA5
XPOT
DUSP11
C2orf78
SH3BP5
B3GNT2
TSEN54
LLGL2
FAM185A
MFSD14B
TRPM7
SPATA2L
SUPT4H1
OXNAD1
DPH3
NDUFV1
YWHAG
VCPKMT
INTS8
GATAD1
GNPNAT1
DNAL1
ITGB1
COPZ1
CCDC86
MTRNR2L2
MSH3
DHFR
CDK1
AGFG2
CCT5
ATPSCKMT
RFWD3
BFSP1
SUB1
COX5A
PRIM2
DSTN
MRPL36
NDUFS6
GPSM2
HELZ
GPATCH4
NAXE
ZBTB9
USP30
KLF10
RMC1
SH2D3C
PCNX3
MAP3K11
CDK9
PIAS3
TRIM45
KCNH6
PCLO
EDC3
MRPS23
SEL1L
PSMC2
DNAJC2
DNAAF2
ZNF789
ATP5MF-PTCD1
ATP5MF
TBK1
ZNF706
PHTF2
TMEM60
UBR5
GPR146
RRP12
SHCBP1
C6orf89
TSEN2
PPIL1
FAAP24
CEP89
SPATA33
DERL1
TUBA1A
ACTR3
ARHGEF5
TIMELESS
MIP
NHP2
OAZ3
AARS2
THAP11
SPDYE6
LOC100289561
SELENOS
E2F5
SSR3
RAB1A
METAP1D
ENDOV
GABARAPL2
HJURP
CDC14B
DYNC1I2
PROS1
ARL13B
SMIM5
HAUS5
CNIH1
CMTM6
RRM2
TMEM262
ZFPL1
CDCA5
FAM227B
DTWD1
PDF
NIP7
COG8
LRFN4
ZFAND3
MAD2L1
IPO11
DIMT1
DUS2
DPEP2NB
DDX28
DBNL
LTO1
PDAP1
BUD31
TEX10
VIPAS39
AHSA1
CTDSP2
DENND2C
NOC4L
DDX51
PTRHD1
CENPO
BBS1
NAA20
NAMPT
PRMT6
IFT22
URB1
PTPN1
OS9
WDR77
ATP5PB
TSSK4
MPHOSPH6
PLEKHM1
SWI5
GOLGA2
EIF1AX
FERMT2
LYRM4
FARS2
HSPA9
ECSIT
IDI1
WDR37
ZSCAN2
TBC1D15
DEPDC1B
ZNF79
ZNF585B
ZNF383
PSMB7
PYCR2
TECPR1
ZNF281
DIP2C
MTFR2
INKA2
DDX20
RXYLT1
FANK1
RAB5B
PMEL
CDK2
CORO1C
HPS3
ZDHHC17
SETDB1
PLEKHN1
NOC2L
KLHL17
KMT5A
QTRT1
MND1
POLR3F
DZANK1
ZNF276
VPS9D1
TMED8
SAMD15
RNF114
VPS13B
RPTOR
TRIM65
MRPL38
PITX3
GBF1
CAMKK2
PSMD4
SLC39A2
METTL17
CDK5RAP2
STK38
ACYP1
ZC2HC1C
TICRR
ZAR1L
BRCA2
LIN52
ALDH6A1
MMS22L
SCRIB
RNF19A
RPL30
GMFB
EHBP1
CDHR2
RNF44
FAM72D
PLK1
ATP5F1E
RFX1
UTP18
MBTD1
MKS1
PRELID3B
WDR35
EEF2K
OXR1
DNAJC25-GNG10
DNAJC25
NPM1
PWP2
LOC102724159
CFDP1
POLR3B
TOP1MT
COPS3
ASCC3
RBM25
TMED10
SPOP
SNF8
ACBD3
TADA3
ARPC4-TTLL3
ARPC4
TOGARAM1
KLHL28
ZSWIM3
ACOT8
TP53INP1
AP2A1
TSKS
NFAT5
TRIM59
PLCL1
SUMO3
RHPN1
MATN3
NEIL3
RNMT
FAM210A
REXO4
ADAMTS13
FAM162A
CCDC58
LINS1
ASB7
SLC35A2
PIM2
MTG1
CYB561
RNF139
AGK
PREX1
RETREG1
NUF2
BLM
UBXN11
COMMD1
SH3BGR
LCA5L
HSPA5
CGGBP1
USP14
TMEM249
SLC52A2
FBXL6
RNF10
SKP2
LMBRD2
CALCOCO2
COQ5
ZNF654
TXLNG
WIPI2
RANBP9
FBXL13
ARMC10
RTEL1
WWP2
NOB1
MUC1
XPC
LSM3
TM2D3
STX4
UQCRC2
MDM2
NRBP1
BDH1
TRMT1
NACC1
SPNS1
LAT
GATB
NRAS
SLBP
TMEM129
TACC3
LRRC37A3
TARS3
UBXN7
MAEA
SLC31A1
FKBP15
ATP1A1
SUSD6
RAD51
TRUB2
COQ4
ZBTB11
RPL24
S100A13
S100A1
CHTOP
NARF
CYBC1
FANCC
ZNF212
MRPL22
GEMIN5
GUK1
GJC2
USP8
BCKDK
KAT8
SCFD2
GAR1
TMED5
CCDC18
SLC30A5
SCRN3
CIR1
POLR2J2
ARSG
YY1AP1
DAP3
KBTBD8
SLC16A6
CYB5R1
ADIPOR1
SMC3
TEX2
CUL2
ZNF888
TRIM56
AP5Z1
ZNF473
VRK3
CS
PYCR3
GFUS
ZNF3
COPS6
POLR3GL
ANKRD34A
LIX1L
HIP1
DISP1
CKAP2L
SRPRB
LSM14B
TMEM258
FEN1
ELAC2
CHFR
EDRF1
DLD
C14orf28
MAP2K2
CSRNP2
LOC102723996
ICOSLG
AURKB
FBXW8
XPO5
POLH
FKBP3
FANCM
VPS11
SLC25A19
CHPF2
ABCF2-H2BE1
ABCF2
NAA35
TMEM183A
SEC61B
SDE2
CEP164
STRIP1
PPM1H
PHETA1
CALB1
NEK2
KNOP1
RECQL4
LRRC14
LRRC24
MFSD3
MFSD4B
RFC1
RPL32
SNX11
CBX1
CNBP
MTPN
LUZP6
POC1B-GALNT4
POC1B
GALNT4
CBLB
SLC10A5
IMPA1
GK5
UPF2
PXT1
KCTD20
SNX4
LGALSL
TNNI3
NEU3
DNAAF3
HELZ2
SECISBP2
CKS2
PCOTH
MIPEP
C1QTNF9B
VAC14
CFAP298-TCP10L
CFAP298
NARS2
TMEM250
PTPRH
YWHAQ
ANKRD28
SLC27A3
FSD1L
UBE2V1
UNC119B
STYXL1
MDH2
SSNA1
ANAPC2
CNPY3
C6orf47
EIF2S1
ATP6V1D
WDR81
UBE3D
DOP1A
DPAGT1
MYBBP1A
GGT6
H2AX
CRELD1
THBS3
MTX1
C2CD2L
JMJD1C
SPTLC2
C7orf50
MTMR14