ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089503 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◣ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
DYNLRB2
PSMD6
SLC12A9
PFDN4
NPAS4
TUBD1
RPS6KB1
TRIM37
BRIP1
USP32
PARD6B
TEX14
RAD51C
BMP7
FBXO32
APPBP2
ARFGEF2
TTC24
IQGAP3
ZNF217
WASHC5
NSMCE2
EEF1AKMT3
METTL1
CYP27B1
SCRT1
DGAT1
BCAS4
DHX40
SIKE1
MOK
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAMDC2
HTR5A
C16orf71
ANKS3
TM9SF1
IPO4
FANCD2
ZFYVE1
HIPK1
NCOA3
XKR7
PPM1D
C12orf66
PDE4DIP
ATXN7
KAT2B
CA4
RNFT1
C3orf14
BARHL1
YPEL2
GTF2H3
EIF2B1
CCNG2
CREBRF
MAX
SLC37A1
RSPH1
CDC14B
ALKBH2
UNG
WDR4
HSF1
BOP1
SPTLC1
ARL4D
MCM7
AP4M1
TRIM33
ZSCAN2
UTP20
CPLX2
SUMF1
AGFG2
KLHDC4
IQSEC3
TSR3
GNPTG
HSDL1
DNAAF1
C16orf46
DYNC2I1
NTAQ1
METTL3
FBXO5
CCNA2
FOXH1
PPP1R16A
BIRC5
ATG14
MED6
TRMT61A
CKB
RNF40
CCDC189
NDUFV1
NAA25
FAM72B
ATP6V1C1
DBNL
KCNH6
ARMC2
TMEM249
SLC52A2
FBXL6
TBX2
SMIM41
ATG101
CCDC86
RNF114
SAP30BP
RECQL5
NOTCH2
L1CAM
RABL2B
CYB561D1
ATXN7L2
PPM1E
FAM214A
ROPN1L
SLC45A3
CRBN
MCM10
NRAS
TASOR2
VPS50
HEPACAM2
ATXN1L
MBTPS1
TTC27
C6orf89
RAE1
MTRNR2L3
RABL2A
RNF166
CTU2
TMEM231
GABARAPL2
TMOD3
CHFR
EDC3
POLR2J3
RAD54B
DHX37
BRI3BP
SMIM5
FANCI
NDUFAF6
CCNE2
QSOX2
THOC7
HCFC2
GLT8D2
ZNF331
RRP1
MOCS3
DPM1
ENDOV
EIF3C
EIF3CL
HEATR5B
GPATCH11
TROAP
ZNF696
MTFR2
DNAL1
HELZ
PKIG
SERINC3
PHTF1
DCLRE1B
AP4B1
NBPF15
C1orf54
APH1A
ARFGAP1
FAM72C
FAM72A
TRIP13
BRD9
RACGAP1
CYB561
TARS3
RRP15
UBE3D
DOP1A
BICDL1
KAT7
LRRC29
TTLL11
FAM72D
TTF2
OAZ3
IDI1
WDR37
TACO1
SGO1
GTPBP10
MTMR14
SMYD5
CCT2
TOP1MT
GFM1
MFSD1
MAD1L1
NUDT1
MRM2
METTL2A
DEPDC1B
CNPY3
CFDP1
BCAS2
SPATA33
ZNF778
NET1
TUBAL3
SMG8
FBXO33
DYRK1B
GNAI3
GPR61
LOC101928764
RMI2
ZHX1-C8orf76
ZHX1
TMEM67
LZTS2
TWNK
MRPL43
ZNF789
ATP5MF-PTCD1
ATP5MF
FBXL13
ARMC10
SLC39A2
METTL17
RRP12
RPP40
PGBD5
INKA2
DDX20
MDM1
GFPT1
KIF14
RHEBL1
KMT2D
MRPL21
IGHMBP2
DENND2C
WDR61
SH3BGR
LCA5L
KMT5A
AHNAK2
CLBA1
POLR3GL
ANKRD34A
LIX1L
NKX1-1
RTF2
MRPS21
USP49
WIPI1
MAPK8IP3
NEMP1
LSG1
TTLL5
ERG28
POLR2J2
NAGPA
SLC25A19
NME1
DSCC1
AP3B2
SQLE
ARRDC4
ITPRIPL1
NCAPH
SPC25
MYL12A
MYL12B
DLGAP5
SKIV2L
NELFE
RMDN1
CPNE3
NBPF1
ACTR6
LRPPRC
GRB2
TAF1C
ADAD2
CSTF1
AURKA
IFT172
GCKR
FNDC4
SLC25A44
POLQ
WDR46
RGL2
PFDN6
DUS2
DPEP2NB
DDX28
SKA3
MRPL57
STYXL1
MDH2
ESPL1
NHP2
NAA35
TRIM45
NUF2
GFOD2
KNOP1
ATG7
WASHC2A
NOL8
CENPP
SRPRB
CCDC146
VCPKMT
THADA
FAAP24
CEP89
IFT22
CYP46A1
RRM2
KCNJ14
GRWD1
DNAH7
ZNF408
ARHGAP1
ABCA5
VANGL1
RIDA
POP1
RAB22A
CKAP2L
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
BOLA2-SMG1P6
AP4E1
TMED8
SAMD15
TM2D3
RBM48
PEX1
WDR25
WARS1
MAPK8IP2
DDX49
COPE
PLEKHM1
NUDT4B
NUDT4
FAM207A
SLC35A2
PIM2
CDC37
IDH3A
TMEM262
ZFPL1
CDCA5
RNASEH1
FIS1
CLDN15
IFT88
ANGEL1
PUF60
GNG14
FBXW9
AOPEP
GPN1
CCDC121
HRH3
TMEM186
PMM2
COG7
POLR2J
URB1
DDX42
CCDC47
PRPF18
SLC25A24
FAM174A
ZHX3
FAM227B
DTWD1
ASNS
TBC1D30
GNS
KLF10
LYSMD2
NUP214
XRCC2
UNC45B
NLE1
ATR
ZC3H18
SPG7
AUH
ORAI2
CACNG4
TSEN2
SAXO2
EFL1
C20orf27
GPR146
YIPF4
NOL6
C12orf45
PLEKHM3
USP39
C2orf68
PDXDC1
RNF181
TMEM150A
FCF1
AREL1
ADCK1
WDR47
CENPBD1
TBC1D15
USP10
ZMYND8
TTLL9
DUSP15
PUS7
RINT1
CSDE1
NUP107
SARS1
SEC13
ACOX3
CEP55
CRELD1
INTS8
COPS3
TTK
ATP6V0D1
AGRP
CLTC
SF3B2
GAL3ST3
ENTPD5
BBOF1
DZIP3
CIP2A
METTL2B
RFC2
KPNA1
GOLGA3
WIPI2
PREX1
TDRD7
TPRA1
RPL7A
MED22
SURF2
SURF1
C11orf49
SUPT4H1
TCTN2
CCT5
ATPSCKMT
SPATA2
QTRT1
CYP2W1
ZNF79
COX19
PSMG4
PSMD12
SYVN1
CARD19
PYCR3
GFUS
FRAT1
DUX4
WDR31
BSPRY
VPS33A
RUVBL1
GOLGA5
VARS1
XRN2
ATP1A1
FANK1
FANCE
GPR89A
WDR35
ZNHIT1
PLOD3
WDR59
PIP4P2
TSEN54
LLGL2
CASKIN2
MKS1
PTPRH
TRMT61B
RAD18
DPY19L4
TF
TCP11L2
TOPBP1
YPEL3
TBX6
UTP23
POU5F1
APRT
CDT1
TCF19
CCHCR1
PRMT5
RBM23
WDR43
PSMB7
WASHC2C
PRR5L
CENPW
COMMD9
VPS11
PRKAB1
DUS4L-BCAP29
DUS4L
COG5
SPTLC2
PLBD2
ZFAND2A
CBLL1
CLNS1A
CNOT4
PTPN1
STOML1
PML
WDR77
ATP5PB
CDIPT
KLHL36
SCFD2
IPO11
DIMT1
ANKRD46
TTLL4
YIF1A
TMEM151A
POLE3
C9orf43
ALAD
GKAP1
E2F7
PI4KB
INSM2
PWP2
LOC102724159
TRMT44
GNA13
POLR2G
TAF6L
PHLPP2
PCYT1A
PLCG1
CMC2
CENPN
SKA2
PRR11
HSPA5
TMEM18
TMEM109
PRPF19
SPOP
INCENP
USP54
CDK7
HEATR1
POLR2K
PPIL1
SPAG1
FBXO43
CEP128
AP1G1
TATDN1
NDUFB9
ZC3H3
DENND4A
LRWD1
ALKBH4
GALK1
NOP9
DHRS1
GABPB1
GCSH
TCTEX1D2
LTB4R2
TP53INP1
GTSE1
DENND4B
SLC4A8
TARBP2
MAP3K12
PIAS3
SPATA25
CTSA
NEURL2
ZSWIM1
COMMD4
FAM161B
COQ6
THBS3
MTX1
HNRNPH1
SPPL2A
NCKAP5L
TMEM251
MOAP1
DNAJC25-GNG10
DNAJC25
RGS14
LMAN2
THAP10
LRRC49
RASA4B
DIAPH3
MRPS23
RAB5B
PMEL
CDK2
TBC1D13
ECT2
TUBB3
MC1R
TRPM7
BLM
UBFD1
EARS2
NUB1
PLEKHO1
EIF2D
TADA2B
CCDC96
LACTB
NKIRAS1
DOK3
DDX41
NR1D2
TUFT1
SLC22A15
TMEM120B
NSUN5
IKZF5
ACADSB
GOLPH3L
TSFM
HM13
ABCC6
L2HGDH
DMAC2L
NOMO3
DNLZ
GPSM1
CARD9
CEP112
UBE2C
ZNF76
SEC22A
FAM183A
AHI1
DLST
ITSN2
WDR26
GPR89B
CIART
SLC5A6
CAD
ATRAID
PDZD2
MARCHF10
EEF1E1
TMOD2
MYO5C
LTV1
TTC26
NOLC1
PFDN5
MYG1
ASB8
AJUBA
KIFC1
NAGK
SLC7A6OS
PRMT7
TOX4
RAB2B
MTPN
LUZP6
METTL6
EAF1
BMT2
RMND5B
TPTE
CORO1A
RBM28
FAHD2A
RASA2
MED20
BYSL
DSTYK
ANAPC15
LAMTOR1
TOLLIP
XPO4
OSBPL8
TDG
C12orf73
VAC14
SEL1L
HAT1
CLCN7
USP2
AP5Z1
NUP160
DPY30
CHURC1-FNTB
CHURC1
ZBTB9
TOP1
VMP1
PTRH2
MFN1
ZMAT3
NOMO2
NOM1
NUFIP1
GPALPP1
RRM2B
MTIF2
PSRC1
ZNRD2
FAM89B
EHBP1L1
LRP10
RBM19
PPRC1
USP30
MTHFD1L
TOMM70
LNP1
MLEC
PIF1
GDPGP1
CIB1
MON2
ELK4
CCS
CCDC87
PIP4P1
OSGEP
APEX1
PNP
FAM185A
MRPL33
KLHL32
NDUFAF4
TCOF1
RABIF
CPSF1
SLC39A4
VAMP5
VAMP8
GTPBP4
RFC3
RIOK3
TAF5
POM121
SPDYE7P
CFAP69
INTS1
CCNB1
MTRNR2L2
MSH3
DHFR
COX6A1
TRIAP1
IREB2
NME2
PSMA5
TECPR1
TMEM214
CCDC200
MARCHF8
CRCP
URM1
NOMO1
ICAM2
PRR29
KDM5B
AXDND1
TBK1
RCE1
CNNM3
AEN
RRP36
MEA1
KLHL24
ZFYVE26
RAD51B
ZFP41
WFDC3
DNTTIP1
CCDC34
INIP
CFAP54
ZC3HC1
COQ2
NEPRO
KRIT1
ANKIB1
CHID1
ESD
CMBL
TAF13
ATP5F1E
TTC23L
PRELID3B
LSM14B
USP8
ATP5MG
ZNF706
PAK2
SKA1
ZNF23
EIF2S1
ATP6V1D
RABGEF1
METTL25
CCDC59
TDRKH
DBR1
RNF216
KIF6
TPRN
TMEM203
NDOR1
HSP90AA1
USP14
WDR20
MAN2B2
HILPDA
SSBP1
PRDX2
RNASEH2A
ZNF131
STRADA
DMXL2
NAPEPLD
PRKCI
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
CPEB4
LOC112694756
SPOUT1
SAC3D1
ADAM17
RFX5
PRMT6
WDR93
PEX11A
FURIN
OVOL2
MUC3A
MMUT
CENPQ
VPS13B
SPICE1
GPSM2
EFCAB12
SSR2
EML1
C5orf51
WDR81
DPH7
NEK10
TFPT
PRPF31
OXNAD1
DPH3
EBAG9
VPS53
GMCL1
TMEM9B
SMG5
VHLL
GLMP
PNO1
TIPARP
TMEM39A
POGLUT1
MXD1
RFC5
VIRMA
TMEM170A
FSD1L
PAOX
ECHS1
SLC35C2
CENPB
CDC25B
SPEF1
OTULIN
CSRNP2
NOL10
BRMS1
RIN1
B4GAT1
CYP51A1
TPD52L2
ABHD16B
RIPK2
CALCOCO2
SV2A
BOLA1
ZBTB17
KLHL12
OS9
ZZEF1
CYB5D2
PSMC3IP
SLC25A13
H1-10
BCAS1
CRNKL1
CFAP61
LYRM4
FARS2
MAPK6
FAM13B
CKAP5
ANXA4
PRKAA1
RIPPLY2
CYB5R4
C8orf33
SSNA1
ANAPC2
MED23
FPGS
G2E3
SH2D3C
SNAPC4
CDK9
AKAP10
PSMB4
CAPZA2
ZNF623
IARS1
RECQL4
LRRC14
LRRC24
MFSD3
MFSD5
SWI5
GOLGA2
MED13
ERN1
SAR1B
WDR3
GDAP2
MRNIP
NDUFB2
MACROD1
OSGIN1
GPATCH4
NAXE
RPF2
ANAPC7
LRFN4
NBN
NEK11
ASTE1
ZNF250
C11orf24
ATP6V0E1
NBAS
MAST1
RTBDN
ADAT1