ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089508 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◣ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

MAMDC2
DUX4
MUC3A
PTPRN2
SNX16
TRIM48
PMF1-BGLAP
PMF1
CNOT3
EPN1
MTRNR2L8
LOC102724770
DGCR6
KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MTRNR2L1
COL23A1
SLITRK3
RGPD1
RGPD2
ZNF285
UNC45B
NLE1
WDR74
STX5
CCDC200
FRG2
RPEL1
FRG2C
ART1
RTEL1
STMN3
NPAS4
UTP20
CRNKL1
CFAP61
HTR5A
NUF2
MTFR2
FBXO5
ARL4D
QTRT1
TTC24
IQGAP3
FAM72C
METAP1D
SGO1
CCNG2
FAM72A
TRMT1
NACC1
CCNA2
FANCD2
EEF1AKMT3
BIRC5
METTL1
CYP27B1
FAM72B
FAM72D
RRP15
ITPRIPL1
UTP25
SCFD2
NCAPH
SMYD5
CCDC86
WDR4
RRM2
RRP12
SLC12A9
ALKBH2
UNG
STAT1
CCNB1
C16orf71
ANKS3
RABL2B
WASHC2C
NAGPA
RAD51
EXO1
TMEM262
NME1
CCT2
C12orf66
AURKB
KIF18B
ZFPL1
CDCA5
RBM19
URB1
CDC25A
TM9SF1
IPO4
KCNJ14
GRWD1
CKAP2L
BCAS3
DZIP3
CIP2A
VPS33A
KIF20A
BRD8
GNG14
CCNB2
TTC27
DHX37
BRI3BP
FBXW9
NOTCH2NLC
KLHL18
KIF9
POLR2J3
SKA3
MRPL57
NEIL3
SLX1B
SLX1A
BOLA2B
LTV1
WASHC2A
BLM
BOLA2
CDK7
MCM7
AP4M1
SULT1A4
SULT1A3
SHC1
PSME3
BECN1
RIPPLY2
CYB5R4
ESCO2
CCDC25
NEK2
SUMF1
FANCI
NUP214
SHCBP1
NOTCH2NLB
NOTCH2NLA
FLAD1
CKS1B
MAD2L1
HEXA
XKR7
SPTAN1
BOLA2-SMG1P6
MOK
NOL6
XRCC2
EDC3
RAD54L
TTK
NOL8
CENPP
TRIP13
BRD9
C16orf46
SKA1
ACOX3
EBNA1BP2
CFAP57
GTF2H3
EIF2B1
CORO1A
RTN4RL1
DPH1
RABL2A
KPNA2
TRMT6
MCM8
CEP135
PDE4DIP
GPATCH4
PPAN-P2RY11
PPAN
ANGPTL6
NAXE
TICRR
TMEM186
PMM2
SPNS1
NAT10
LAT
P2RY11
MIS18A
VARS1
IPO11
DIMT1
MRPL27
EME1
EXOSC5
BCKDHA
BUB1B
NBPF1
ZMPSTE24
KIF15
KIAA1143
DYNC2I1
TBRG4
IQSEC3
SPATA25
CTSA
SECISBP2
CKS2
RNF166
CTU2
ATP6V0D1
AGRP
TRIM37
NEURL2
ACTR6
POLQ
KIF2C
TRIP4
PCLAF
ZSWIM1
WASHC5
NSMCE2
GTF3C4
DDX31
TMEM248
TRUB2
COQ4
TTF2
NUDT15
KIAA0895
SMC2
TROAP
KNOP1
RNF40
CCDC189
SPCS1
NDUFAF6
GLT8D1
POLR1B
PIGU
HMGB1
ANLN
DLGAP5
ELOVL1
CDC20
PBK
TRMT61A
CKB
USP2
CYB561D1
HEATR1
UFD1
NOL7
CDC45
UBXN11
PRR5L
VTA1
NMBR
NUDT2
KIF24
SUPV3L1
TMCO2
HCFC2
GLT8D2
CCNE2
PMS2
AIMP2
MCM10
CENPW
CPLX2
UBFD1
EARS2
LYRM4
FARS2
POU2F1
POLR3D
KIF23
SLC25A26
COMMD9
GPN2
PRCP
DDIAS
HAGH
FAHD1
GBA
WDR46
RGL2
PFDN6
HEATR6
NOP16
HIGD2A
PLK4
GPATCH3
LRRC29
DNASE2
KLF1
GCDH
TAF13
CDK1
DNAJC25-GNG10
DNAJC25
ZNF778
RDH5
PNO1
PUM3
DUS2
DPEP2NB
DDX28
KCTD9
CDCA2
DPH2
B4GALT2
ATP6V0B
TDRD7
DHX40
KIFC1
DYRK1B
POC5
SLC35B2
URB2
TAF5L
ASPM
SNRPE
TUBD1
RPS6KB1
MDN1
CDC6
SGO2
ATR
RPP40
ODF2
PSMD6
GTSE1
DDX49
COPE
TFB2M
SSBP1
CNST
DDX11
SHQ1
HSP90AB1
MAST1
ITGA7
BLOC1S1
UTP4
TTC26
DERPC
CHTF8
UBE2C
ZNF358
CBWD5
DDX19A
MYBL2
EIF3C
RTBDN
WFDC3
DNTTIP1
PCOTH
MIPEP
C1QTNF9B
CSTF1
AURKA
DDX21
MCOLN1
H3C15
H3C14
H2AC19
H2AC18
H4C14
RNASEH1
TADA2B
CCDC96
TSFM
ZNF497
A1BG
COX6A1
EIF3CL
EIF2D
ADHFE1
LMLN2
IREB2
HM13
PUS1
PNPT1
RRS1
SASS6
MRTO4
EMC1
RBM28
LSM12
G6PC3
TRIAP1
TTLL9
DUSP15
VAC14
IMP4
CCDC115
COG7
GATB
GFM1
MAK16
TDG
C12orf73
TRMT61B
INTS7
DTL
CBWD3
LAMP1
NOL10
BUB1
PGBD5
PBRM1
GNL3
RNF187
WIPI1
SRPRB
CASP8AP2
C6orf89
MND1
ATG14
UTP15
ANKRA2
CENPS-CORT
CENPS
TRIP12
FBXO36
PWP1
ZNF331
LOC101928764
KAT2B
BRCA1
NOTCH2
LSM5
AVL9
ARMC2
TTLL11
PAXBP1
FAM227B
DTWD1
RTTN
MFSD1
KDM5B
MRM3
GLOD4
CEP55
CREBRF
C5orf51
KNL1
TFIP11
ZGRF1
LARP7
THOC3
PINX1
IARS1
ZFYVE1
LZTS2
KLHDC4
WDR62
THAP8
DIAPH3
DYNLRB2
TRMO
CEP43
TRAPPC6A
BLOC1S3
GSN
FBXL13
ARMC10
LIN28A
PCNA
ZNF688
PPRC1
MARCHF8
TWNK
MRPL43
TSR3
GNPTG
RBKS
BABAM2
H4C15
ENDOV
NAGK
RHEBL1
DCLRE1B
AP4B1
NKX1-1
DYNLL1
MAPK8IP2
DBNL
VRK1
TSEN54
NPM1
TASOR2
NEMP1
PPIL2
RAD18
ZGLP1
FDX2
ITGB3BP
EFCAB7
LLGL2
CASKIN2
FAM53C
CDC25C
DHODH
CHCHD1
PKD1L3
PRMT2
SNRPD1
ECSIT
THADA
SYNJ1
FZR1
CFAP298-TCP10L
CFAP298
MRPL3
XRN2
MRPS23
BARHL1
STIL
OIP5
NUSAP1
BBS5
DOHH
TMEM230
MRPS35
QTRT2
CCDC191
PRMT1
OGDH
ATAD2
RCL1
INSM2
ANAPC10
ABCE1
IFT46
ARCN1
CBWD6
RAB14
HSPA9
KMT2D
COMMD4
ASF1B
FARSB
CASC3
SETD4
CBR1
E2F3
YARS1
S100PBP
DDX42
CCDC47
LRRC59
ZNF593
C1orf232
LTN1
GTPBP4
DHRS11
CLSPN
CDCA8
C1orf109
CRBN
RUVBL1
CFAP410
CNN1
NOC4L
DDX51
IFT57
USP32
KCNIP2
DUS3L
L1CAM
PRR22
ZBTB9
RRP1
NDUFS7
UBE2Q1
CHRNB2
AP5Z1
AEN
WDR36
CCDC146
SRA1
TMEM242
MRM1
MKI67
SLC25A51
VPS50
HEPACAM2
SECISBP2L
CDC37
MARS2
MMUT
CENPQ
MVK
UBA52
CDS2
TTLL4
PSMD9
HPD
HMGB2
USP30
NRAS
HSDL1
DNAAF1
INO80
RPUSD4
FAM118B
AXDND1
TOMM40
ZAR1L
BRCA2
POLR3F
DZANK1
RTF2
RFC3
BRSK1
HSPBP1
SUGP2
ARMC6
TEKT2
ADPRS
FAM200B
USP39
C2orf68
CCDC116
SLC35A4
APBB3
NRL
STYXL1
MDH2
SLBP
CAMTA1
TMEM129
TACC3
CWC25
STK11IP
ZBTB17
TAF4B
SLC37A1
PISD
ZSWIM8
GNL2
ATP6V1C1
RIOK1
CAGE1
MPHOSPH10
MCEE
CCDC77
HIPK1
PARPBP
NUP37
RPIA
FBXW8
CNKSR1
PARD6B
PPIH
SEBOX
ESPL1
PRKAR1B
GMNN
TFPT
PRPF31
PDE8A
SCRT1
TSEN2
NTAQ1
LARP4
FAM186A
CMC2
CENPN
RAD9A
FBXO32
NUP107
NCLN
TIPARP
ZWILCH
SNAPC5
RPL4
CPEB4
AGFG2
RHNO1
FOXM1
RAD51AP1
C12orf4
GTPBP10
DGAT1
C8orf33
RNASEH2C
KAT5
YDJC
TMEM231
MRPL4
ARFGEF2
DNA2
STX18
UTP23
SKIV2L
NELFE
TMEM199
POLDIP2
MED20
BYSL
UBN2
TOMM22
PDXDC1
RPSA
TSN
PPT1
RRP36
MEA1
S1PR4
ZSWIM9
LIG1
SLC39A6
ELP2
PFDN4
POLR2K
SSNA1
ANAPC2
EEF1E1
GAR1
DHX33
KLHL32
SEC14L1
DNAH7
RNF181
LAP3
PIP4P1
RNMT
FAM210A
YIF1A
TMEM151A
CENPM
WDR43
FAM174A
TIMELESS
MIP
TMEM150A
SAR1B
MTR
REXO4
ADAMTS13
ABCF1
ARID3B
PHB2
C12orf45
NBPF15
LARS2
POMZP3
ZC3H18
GLRX5
CELSR3
LRRC73
SDAD1
SOD2
TXNL4A
SLF2
ZNF23
PPP1CA
TOR1A
INKA2
CFAP299
SLC25A1
RPS29
TIMM23B
PARG
NET1
FAM187A
EFTUD2
CCDC103
UNKL
NUP35
WWP2
NOB1
PACRGL
ADAT1
AP3D1
OXNAD1
DPH3
RGS20
WDR61
PWP2
LOC102724159
ZNF202
ZBTB49
LYAR
DHDDS
ADPGK
PPIL1
SLC35C2
OSGEP
APEX1
DDX20
SKA2
PRR11
NOXO1
ADK
TIMM23
RSPH1
STAM2
TXLNA
SPC25
FKBP1A
GDAP1
IQCH
AAGAB
PTRHD1
CENPO
REXO5
ERI2
PLK1
PALB2
DCTN5
DCAF11
IQCG
XPO5
POLH
SRD5A1
NSUN2
TRMT5
SLC38A6
KIF14
YIPF3
POLR1C
VPS35
POLR1F
ATXN7L2
LSG1
CLTC
SPATC1L
SF3A3
ATP6V1H
SPG21
ZNF529
FAM180B
METTL3
FKBP3
FANCM
WDHD1
SOCS4
TRIT1
DBNDD2
TTC7A
MCFD2
TEX14
RAD51C
PLEC
LAMTOR5
ASNS
SUPT7L
SLC4A1AP
NDUFS3
KBTBD4
TMEM167B
SPAG1
SARS1
DDX18
NEU1
CFDP1
RANBP6
KIAA2026
EIF4H
MAD1L1
ARHGAP11A-SCG5
ARHGAP11A
ROM1
EML3
B3GAT3
CARS1
E2F8
C6orf47
RBM48
PEX1
SPRYD4
CEP162
OXSM
NGLY1
CNPY3
TBL3
RPS2
RNF151
PEPD
PC
EIF2B3
GPD1
COX14
TCTN2
HASPIN
NUDT1
MRM2
CSE1L
SPTLC1
WDR81
DBF4B
CENPF
NCL
ERLIN2
TMED5
CCDC18
RPF2
QSOX2
MAP3K7
CRCP
SHOX2
CNOT4
KDM5A
PPP1R10
MRPS18B
ATAT1
NPIPB15
KTI12
LMLN
EBAG9
STAT3
STX16
GABARAPL2
WDR3
GDAP2
RPL6
PTPN11
NUDCD3
CDK5RAP1
SCAMP4
ADAT3
KIF3B
LRP2BP
ATP5F1E
ASH1L
PDF
NIP7
COG8
EIF2S1
ATP6V1D
NOLC1
KIAA0895L
INTS12
GSTCD
ANKRD37
PPIL4
CDKN2C
MIER1
DNAI4
APPBP2
SMIM41
FAF1
PDE6D
COPS7B
BRIP1
GGNBP2
SLF1
KIAA0825
TFAP4
SETD6
KLHL12
TSGA10
NDUFAF5
ESF1
SMC4
IFT80
AATF
PUS7
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
WDR53
FBXO45
SAP30
APOM
UBIAD1
SLC25A32
DCAF13
TAF10
LOC112694756
NOM1
ING5
CLUAP1
C16orf90
NHP2
RIOK3
RPUSD2
CCDC32
TTC4
POLE3
C9orf43
ALAD
HSPH1
TTC23L
TRMT44
EFHC1
TMEM39A
POGLUT1
UBE3D
DOP1A
ZNF771
NDUFV1
MRPL21
IGHMBP2