ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089507 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◣ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
HEATR6
TRIM37
PSMD6
TUBD1
RPS6KB1
MAMDC2
USP32
TTC24
IQGAP3
PFDN4
BRIP1
NPAS4
BCAS4
ZNF217
TEX14
RAD51C
ALKBH2
UNG
DUX4
PARD6B
APPBP2
DYNLRB2
C3orf14
ARFGEF2
BMP7
PPM1D
HIPK1
NCOA3
SLC12A9
FBXO32
SKA3
MRPL57
YPEL2
SGO1
DZIP3
CIP2A
FAM72B
HTR5A
RRP15
NDUFV1
DHX40
PDE4DIP
FAM72C
FAM72D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TICRR
CRBN
TSR3
GNPTG
TROAP
NEMP1
ZFYVE1
XRCC2
NUF2
FAM214A
BARHL1
KIF18B
EEF1AKMT3
METTL1
CYP27B1
CCT2
RNFT1
CA4
NAA25
ARL4D
FAM72A
TRIP13
BRD9
SMG8
EDC3
DYNC2I1
SUMF1
MOK
PPM1E
L1CAM
C16orf46
C12orf66
SFSWAP
PHTF1
POLR3GL
ANKRD34A
LIX1L
TBX2
CCNA2
TTLL11
OAZ3
POLQ
DENND2C
VAC14
UTP20
LYSMD2
TMOD2
SPEF2
FANCI
CREBRF
KLHDC4
NOTCH2
LOC101928764
CSTF1
AURKA
DCLRE1B
AP4B1
ESPL1
SIKE1
HSDL1
DNAAF1
ITPRIPL1
NCAPH
TRMT61A
CKB
CCDC200
KPNA2
RAB22A
TTF2
NEIL3
IQSEC3
ZEB1
ATXN7
UBE2C
DEPDC1B
ATXN1L
MIS18A
FBXO5
SCRT1
DGAT1
ATP5F1E
PRELID3B
CPLX2
INKA2
DDX20
NET1
TUBAL3
BIRC5
NAGPA
TMEM262
ZFPL1
CDCA5
SMIM41
ATG101
THOC7
QSOX2
KIF14
ZNF331
ZHX3
SPATA25
CTSA
NEURL2
ZSWIM1
DLGAP5
ATP1A1
TTK
NBPF15
TRIM33
TBC1D30
GNS
TACO1
ABCA5
VANGL1
HCFC2
GLT8D2
TASOR2
XKR7
PLCG1
DYRK1B
TMEM109
PRPF19
METTL2A
VRK1
ATG14
SPPL2A
GTF2H3
EIF2B1
DNAH7
MYL12A
MYL12B
NCKAP5L
FAM227B
DTWD1
CSDE1
CYB561D1
NEK2
TSEN2
KCNH6
NUDT4B
NUDT4
FANCD2
DDX11
RNF114
CNPY3
KAT2B
NTAQ1
WASHC5
NSMCE2
SGO2
CLTC
TASP1
CEP128
RNF166
CTU2
WFDC3
DNTTIP1
LRFN4
RRP12
RTF2
MAD1L1
NUDT1
MRM2
SLC25A24
SMC2
GABARAPL2
CSRNP2
SKA2
PRR11
GNAI3
GPR61
RAD54B
RAD18
APRT
CDT1
KLF10
SEL1L
EXO1
TMOD3
INCENP
SLC45A3
HELZ
CMC2
CENPN
DSCC1
PSMA5
SLC37A1
RSPH1
PLEKHM3
CKAP2L
ARMC2
AP5Z1
CFDP1
SPTLC1
SAP30BP
RECQL5
METTL2B
NUP214
EIF2D
PRKAR1A
GCSH
FOXH1
PPP1R16A
PHLPP2
RNF40
CCDC189
MTFR2
DHX37
BRI3BP
ART1
EPN1
UBE3D
DOP1A
PKIG
SERINC3
SLC35B1
NUP107
FAM240C
CCNG2
TBC1D31
MTMR14
CCDC86
MCRS1
PRPF18
ECT2
PDE6D
COPS7B
AP4E1
RMDN1
CPNE3
NOL8
CENPP
MCM10
SPC25
GPR89A
CHD1L
PRKAB2
RAB21
ZC3H18
SUPT4H1
ATR
HSPA5
SQLE
GPSM2
MARCHF8
RRM2B
SCFD2
NOP16
HIGD2A
VPS50
HEPACAM2
POLR2K
SPAG1
GNA13
DNA2
MRPL22
GEMIN5
NRAS
PPRC1
TADA3
ARPC4-TTLL3
ARPC4
PDIA5
MOCS3
DPM1
PHF5A
ACO2
NDUFAF6
CCNE2
TOP1
KLHL24
PREX1
ATAD2
CHUK
RABL2B
CLCC1
RRM2
RABL2A
EIF3C
EIF3CL
C12orf45
BICDL1
PRMT6
SMYD5
SARS1
CENPE
FANCA
TM9SF1
IPO4
BLM
UFD1
CDC45
RIPK2
C16orf71
ANKS3
TSFM
PPP1R12B
UBE2T
CKAP5
RRP1
PDXDC1
CDK1
PWP2
LOC102724159
EEF2K
TPTE
LRRC29
DLST
MYO5A
KCNJ14
GRWD1
RUVBL1
CHCHD6
MARS1
ARHGAP9
GTSE1
GTPBP4
ETFRF1
CFAP94
NKX1-1
RBSN
CANX
ZDHHC24
ACTN3
MLYCD
MLKL
ASPM
PSMD12
BUB1
RHNO1
FOXM1
TMEM39A
POGLUT1
KIF11
GFPT1
QTRT1
MYBL2
MRPL11
PITPNB
SLC27A2
DNAJC25-GNG10
DNAJC25
DDX49
COPE
USP30
FBXW8
TRPM7
AGPAT2
POC5
FRAT2
ZNF622
DECR1
PIEZO1
GPATCH4
NAXE
CENPW
UBE2G2
GFOD2
TMEM120B
FBXL3
RTN3
ATL3
NUDT2
KIF24
RIDA
POP1
ODF2
XRN2
TCOF1
SLC25A19
SPATA2
SPTLC2
BCAS2
PES1
SH3BGR
LCA5L
INTS2
VPS13B
HSP90AA1
GOLGA5
LAMTOR3
WDR20
LEO1
PTPRN2
WIPI2
POLR2J3
TFRC
CIT
INTS1
SLITRK3
CCDC39
ZAR1L
BRCA2
EEF1E1
SLC35C2
GMCL1
PTTG1IP
CEP55
GOSR2
CCPG1
C15orf65
RASA2
MCM7
AP4M1
MRPL3
ATP6V1C1
ZFAND2A
PGBD5
WDR48
SCN11A
SLC39A2
METTL17
TMEM231
NARS2
PSRC1
ANKRD46
MDM1
NBPF1
RAD9A
PPP1CA
PLK1
NHP2
PRDX2
RNASEH2A
SAMD10
TMED10
PRPF6
KRR1
GMPS
THOC3
MYBL1
TENT5C
ZDHHC9
PPM1H
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
CORO1A
NPM1
POLN
HAUS3
TMEM67
MTRNR2L2
MSH3
DHFR
DDX21
YIF1A
TMEM151A
ZNF23
NXF1
THBS3
MTX1
NGDN
AP1G1
AP3B2
AZIN1
CHURC1-FNTB
CHURC1
ACTR6
KNOP1
MND1
TSEN54
LLGL2
POLR3F
DZANK1
ZBTB9
E2F8
TCTN2
CRELD1
PIAS3
WDR74
STX5
WDR4
TTC27
LRRC59
ZHX1-C8orf76
ZHX1
FAM117B
NIT2
BCAS1
WASHC2C
RBM19
DUS2
DPEP2NB
DDX28
UTP4
DERPC
CHTF8
GSN
RAB14
CDC14B
RAB5B
PMEL
CDK2
ASB8
ZNF507
MACROD1
MED13
KLHL36
MAPK8IP1
WWP2
NOB1
TBC1D15
RFWD3
CHFR
SPDL1
LTV1
BUB1B
POLE3
C9orf43
ALAD
PTPN1
RTKN2
TBK1
METTL6
EAF1
TRIM48
CDC6
TFIP11
GTPBP10
ATG7
POLG
MAPK8IP3
OTUD7B
URB1
SHCBP1
SPTAN1
PTRHD1
CENPO
FIS1
DPY19L4
CLDN15
USP54
TUBB3
MC1R
MRPS23
UTP23
SDF2L1
CFAP69
GDPGP1
CIB1
SUSD6
DUS4L-BCAP29
DUS4L
COG5
TF
TM2D3
MFSD5
TOPBP1
LZTS2
TWNK
MRPL43
NOC4L
DDX51
KPNA1
ARSG
UQCRC2
SLC16A6
PLK4
CPEB4
RACGAP1
ADAR
DYRK3
CNOT10
MTRES1
DENR
DIAPH3
HEATR5B
GPATCH11
HEATR5A
ZNF367
NEK11
ASTE1
GPR146
NME1
ZNF778
TOMM40
RAE1
MTRNR2L3
CATSPERZ
ESRRA
AMIGO1
PCOTH
MIPEP
C1QTNF9B
TTC26
C5orf51
GPR89B
E2F5
COQ2
C20orf27
ACBD3
ERGIC1
DHODH
PKD1L3
BRMS1
RIN1
B4GAT1
FAM207A
FAM185A
MFSD1
DDX42
CCDC47
SPATA33
RXYLT1
TPRN
TMEM203
NDOR1
BMT2
OSGIN1
FAM220A
WDR46
RGL2
PFDN6
C6orf89
TDRKH
TMEM183A
KIF3A
CCNI2
TKFC
DDB1
DYNLL2
ARHGEF5
RAD51
PPAN-P2RY11
PPAN
ANGPTL6
P2RY11
ATP6V0D1
AGRP
COG7
RNF181
TMEM150A
ADAT1
NOM1
C17orf97
SNX16
SRPRB
NUB1
ZMAT3
SNX11
CBX1
U2SURP
VEZF1
DMXL2
MYO5C
S1PR3
C9orf47
FRG2
MPHOSPH6
TCTEX1D2
ABCC6
NOMO3
ABHD4
DAD1
MTM1
LTO1
TBC1D19
GABPB1
USP14
ZC3H3
P2RY2
SLC22A15
SLC25A26
MKI67
RAD51AP1
C12orf4
WDR43
DBNDD2
RECQL
GOLT1B
G2E3
VAMP3
FSD1L
MXD4
NOL6
TCP11L2
RMI2
KATNIP
GTF3C1
RPN1
TEX2
SGK3
UBE2V1
ELOVL1
CDC20
STX16
GOLGA3
IFT88
GTF3C5
RUBCN
CSAD
ING4
ZNF740
NDUFB5
MRPL47
TMEM65
SRD5A1
NSUN2
LRRC37A3
MALSU1
RIOX2
KIF20A
BRD8
VPS33A
RHEBL1
KMT2D
STIL
TIPARP
ZNF473
VRK3
INIP
GSC2
TUFT1
MON2
OAT
DNAJB6
IGSF3
NPIPB15
CS
PIP4K2C
FRAT1
CPSF1
SLC39A4
DBR1
FAM91A1
GPR135
GNG14
FBXW9
CALM1
EDEM3
HSPA12A
PCNX3
MAP3K11
ENO4
C14orf28
SFT2D2
GALK1
HEATR1
COX6A1
SHQ1
TRIAP1
MRPS35
PUS7
RINT1
SYNGAP1
CUTA
PHF1
RAB41
PDZD11
KIF4A
TBC1D13
LMBR1
POFUT2
MAPK6
TMEM251
MOAP1
SDHAF2
CPSF7
GPD1L
PIP4P2
LRCH3
OVOL2
TMEM186
PMM2
WIPI1
ZGLP1
FDX2
RPLP0
GCN1
UBE3B
KCTD10
FAM133B
SENP5
MAP3K3
OXSR1
CTDSP2
UFM1
GNB5
AURKB
WASHC2A
CCDC146
CAMTA1
EIF1AD
CST6
BANF1
PPIB
GOLIM4
ACTL6A
NGRN
PSAP
SMIM17
HAUS7
TERF2IP
KARS1
FAM204A
PTPRH
UBR7
GON7
AHCYL1
PRIM2
HSF2
DUT
CREB3L2
FANCC
FAM98A
TRAFD1
WDR47
RAB13
ACACA
ASCC2
RCE1
SLC39A1
CREB3L4
JTB
UEVLD
COX6C
POLA1
SPRYD3
ACOX3
SECISBP2
CKS2
RDH5
ITGA7
BLOC1S1
EIF2S1
ATP6V1D
OS9
COPS3
DDX5
CEP95
POLG2
EDC4
ARPP19
LYPLAL1
FADD
SLC35D2
WDR17
HS3ST6
HSF1
BOP1
LSS
TRIM25
SPG7
NOMO2
KDELR2
ARNT
E2F7
HOXA2
HOXA1
KCND3
CCNB1
RECQL4
LRRC14
LRRC24
MFSD3
RFC5
NARF
CYBC1
KBTBD8
IQGAP1
SPATA13
DMPK
DMWD
LTN1
FCF1
AREL1
SH2B1
YIPF4
LACTB
TUFM
PFKM
SENP1
DENND4B
FAM172A
MAN1A2
ZNF821
PIGU
KIFC1
RTEL1
MVK
SLBP
TMEM129
TACC3
THAP5
DNAJB9
NME2
TRAPPC2L
GALNS
ZNF446
ZNF324
RCAN1
CDIPT
AKNA
EIF2B2
MARVELD3
INSM2
FBXO43
DDX46
LRPPRC
DDX10
LSM14B
NFAT5
IPO11
DIMT1
SYNJ1
TOMM22
MORN2
DHX57
STOML1
PML
TMEM249
SLC52A2
FBXL6
CHD1
SNRPB2
THAP10
LRRC49
RARS1
MTPN
LUZP6
XPO4
NBAS
TP53INP1
RNF216
PXMP2
POLE
HELB
TLK2
LRATD2
MAK16
ECSIT
CNN1
SSNA1
ANAPC2
SAR1B
TRMT44
ALG8
RPL7A
MED22
SURF2
SURF1
SNAPC4
PTBP3
ZFYVE27
CBY3
MTMR3
NEK7
NAGK
PRMT2