ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11525512 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◣ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

WDR74
SNX16
SPATC1L
TNFRSF19
MTRNR2L2
DNM2
PAFAH2
SP2
DDX49
COPE
FEM1A
H4C3
UNK
EVI5L
RFX1
TCEA2
CLPB
RWDD1
MMACHC
GSPT1
PHF12
SLC25A25
NAIF1
BOD1
MTRNR2L8
DDX23
PNPLA6
ST3GAL2
ADAMTSL1
IFRD2
H4C11
ANKHD1-EIF4EBP3
ANKHD1
SCAF1
RPS7
PHB
MRPL24
CHMP4B
AP2S1
FBXL19
PSMD11
RAB5B
CCAR2
VIPAS39
AHSA1
ZNF268
ZSCAN22
C16orf91
NDUFA10
VPS50
HEPACAM2
POLR3F
DZANK1
CIC
PNKD
AAMP
C19orf53
SLC35E2B
MAPKAPK5
ZNF225
TMEM94
NFKBIL1
ATP6V1G2
H4C14
H4C15
PPP1R12B
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MRPL21
IGHMBP2
DFFA
MRPL11
DSTYK
FASTKD1
VEZT
FGD6
PAK1IP1
C6orf52
BANP
PEMT
KHSRP
IFTAP
RANBP2
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SCNM1
LYSMD1
NCLN
SUCLG1
SMPD3
UBQLN4
LAMTOR2
NUF2
VTI1B
YJU2
THRAP3
AURKAIP1
ZNF143
WDPCP
MDH1
TBL1X
SEC61B
SUDS3
NUP205
GATB
PES1
C1orf159
CCP110
OSBP
TSNAX
SUPT7L
SLC4A1AP
TMEM115
SYMPK
FOXA3
PRRG2
NOSIP
MRPS7
GGA3
PRCC
RPL9
LIAS
COPS7B
RPS27A
CLHC1
NR1H3
ACP2
TARS2
UBAC1
RBBP5
REXO1
ING4
ZNF570
WDR53
FBXO45
MTOR
TSNAXIP1
RANBP10
ZNF335
THOC6
HCFC1R1
EXOSC4
FAM168A
CCDC90B
AHCYL2
SP1
INTS9
HMBOX1
SNX17
EIF2B4
SCRIB
C19orf48
RNASEH2A
ING3
STX16
H4C2
POLDIP3
TBL3
PPRC1
POLR2E
AP2M1
MAF1
HNRNPL
TEPSIN
NDUFAF8
NEBL
TSC2
NTHL1
ZNF235
NOC4L
DDX51
TOM1L2
DRC3
FBH1
ANKRD16
ZNF547
TRAPPC2B
CACTIN
DYNC1I2
TXNRD1
STK36
RNF25
H2BC4
USP48
STAM2
GTF2H4
CAPN15
SUPV3L1
ISY1-RAB43
ISY1
INVS
ERP44
COMMD1
CCT4
TACO1
ZFYVE1
ZNF383
ACTR1A
RPGRIP1L
FTO
SUFU
LYRM4
FARS2
ADPRS
NDC80
METTL4
UFD1
CDC45
ZFYVE19
DNAJC17
ATP5MG
IPO13
SF3A3
KRR1
FAM149B1
ECD
NDUFS3
KBTBD4
OAZ3
GOSR1
BUB1B
RPS3
PEX26
AXDND1
CCDC200
KATNB1
CALR3
C19orf44
H4C12
FAP
GALM
RPS20
TSN
LRRC29
HNRNPC
ELOC
RPL32
LRCH4
FBXO24
SF3B6
FAM228B
ORMDL3
LARS1
TSSC4
SLC35B1
LSG1
H2AC6
ZNF165
PIN4
NUDCD1
HDAC9
ZNF17
CCDC146
H4C5
ZNF687
GPR137
RGPD2
RGPD1
SSR3
SPSB3
NUBP2
GPR108
PRR14
NPRL2
CYB561D2
STT3A
TFPT
PRPF31
STAM
VCPIP1
C8orf44-SGK3
G3BP1
SIRT2
NFKBIB
UFSP2
MTRNR2L9
BMF
SP5
SIRT4
MICOS13
HSD11B1L
CYCS
GBA
SART3
ISCU
CRTC2
TIMM21
FBXO15
COMMD9
NR6A1
HRCT1
FLAD1
STIP1
DDX39B
NUP107
AK2
TMEM60
PHTF2
TMEM11
COX16
KHDC4
RPIA
ZNF691
EHF
LMAN2
EIF2AK3
CCDC174
NLK
ZNF417
MRPL53
WDR46
PFDN6
ALKBH7
E2F4
ZNF444
PIGL
FARSB
UBR2
DDX41
NUCB1
KBTBD6
CNIH4
PANK4
MED27
GOSR2
SPHK2
RPL18
TRDMT1
EXOSC5
BCKDHA
ANAPC5
METTL3
EFTUD2
CCDC103
SRSF11
LRRC40
SLX4IP
TMTC3
CEP290
SEC11C
INTS1
PSMC5
FTSJ3
TTI2
HEXIM2
EIF3F
NMT1
DCAKD
LIN37
SMG8
NME1
RAB11B
SSBP1
TMEM242
ZSWIM3
ACOT8
PWWP2A
PHB2
NUDT13
NFIB
RNF121
MTRNR2L10
LOC100133315
ATP5F1B
NDUFS7
ZNF337
COX7C
TATDN3
NSL1
METTL26
SLC8A1
PSMB6
CDK5RAP2
SUGP1
MAU2
TCERG1
VWA5A
GTF3C3
ZFPL1
CDCA5
UBE2I
ZNF576
IRGQ
TBC1D10B
MYLPF
BUB3
KRT15
ZNF548
NEDD8-MDP1
NEDD8
GMPR2
H4C8
MRPL28
GSK3A
CLN3
ATG4C
RPS6KB2
ZMAT2
ZBTB45
MRPL30
MITD1
CAND1
SEL1L
C12orf43
NDUFAF5
ESF1
BABAM1
RHOT2
CCNL1
EMC4
TRAF7
ZC3H10
SMARCD2
DHX8
CTU1
CCDC124
HNRNPUL1
KRT23
EXD2
CTDP1
RBL1
UTP3
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
VPS25
SMARCAL1
PPP1R12C
TRMO
PABPN1
SRD5A1
NSUN2
SSBP2
TRIP4
PPP6R1
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
ARHGEF1
DLGAP1
ZNF140
TMEM160
CIAO2A
CD2BP2
SMAD3
CRADD
TOP2A
MTRF1
EPS15
BPNT1
RCAN1
FBXW11
PNN
ZNF211
RPL37
DYNC2I2
CCL3
COPS7A
SYT7
ZCCHC4
SLC39A9
PCBP1
ERH
RPAIN
PRORP
PPP2R3C
NUP88
CENPA
TBP
PSMB1
ZNF286A
H2AC19
H2AC18
INO80C
GET3
FCF1
AREL1
STK25
SLC25A19
NDUFB3
FAM126B
ABT1
H4C4
USP30
RARB
ZNF688
JOSD2
DMAC1
ZNF628
SESN1
CEP57L1
ZCCHC8
TM9SF4
RPL35A
IQCG
RABAC1
CAPS2
RPL27
TRAPPC9
SHPK
KLLN
CTNS
NDUFB5
MRPL47
TOR1AIP1
INTS10
PNISR
MRPS23
HEMK1
GBF1
SF3B3
COG4
RPL14
MYOM2
GABPB2
XAB2
GORAB
VRK1
TJP3
HSPA9
SREK1IP1
CWC27
ZSCAN5A
COMMD2
C1orf109
ARHGEF2
NVL
TMEM63C
BMERB1
UTP11
ENPP4
CLIC5
LTA4H
ATP6V1G1
TXNL4B
THYN1
DHX38
ACAD8
TOMM40L
PEX3
ALKBH3
ADAT2
KCTD5
PROSER3
HSPB6
PTDSS2
ATP2C1
TPRKB
XPNPEP3
ST13
KLF6
FUT10
TIMMDC1
MTRNR2L1
TRAPPC3
HEXA
MRPS18C
HELQ
RAP2B
HBP1
LNPEP
MDM2
MCAT
ABCF2-H2BE1
ABCF2
ADO
ACTL6A
ZNF56
RTRAF
RTF2
PDE6D
COX7A2L
PEAK1
HMG20A
CXCR5
CCL5
TMEM256
TTC33
TGIF1
SMCO1
UBC
NCOA7
MNT
KAT6B
SNRPB
VPS52
RPS18
ILF2
NUP153
RBM25
NDUFC2-KCTD14
NDUFC2
MAP2K3
CELF3
SNX15
KMT2C
EML2
DPP9
GCLC
ZNF608
BTRC
ZNF226
LTN1
POLG
PARP2
LAMP1
DHX33
AP1G1
ZNF384
SKA2
PRR11
KANSL3
MRPL20
MRPL1
DCP1B
DRAP1
C11orf68
PXMP2
POLE
USP3
COPS8
RPS13
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
MED23
RABL2A
FSD2
RTEL1
FMO4
CWC25
TP63
SMG5
RBM42
MARS1
BBX
ARHGAP9
UBB
PEX2
FOXK1
FAAP24
CEP89
RPS23
EXOSC6
CMSS1
ATP6AP1L
WDR83OS
WDR83
HOOK1
FDPS
AQR
RAD51AP2
MRPL44
C2orf42
ZNF565
ZNF146
TPST1
TMEM143
SECISBP2
RAD51AP1
METTL25
FAM156B
FAM156A
CCDC59
C16orf72
C12orf4
ZNF552
WBP1L
WAPL
SELENOH
GEMIN6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFATC2IP
SPC25
INSR
FOS
SAP30BP
RECQL5
KDSR
FLOT1
CRB1
ZC3H6
ZBTB38
SPTLC3
NCDN
KIF16B
KIAA0319L
EIF4A1
CDK8
ZNF749
ZNF584
TIMM22
RPL29
LRRC14B
DVL2
WBP2
SCYL3
RANGAP1
PRPF18
MAMSTR
FOXP2
ZNF419
SLC33A1
NR1H2
CCDC77
TBCK
SART1
MPND
AIMP1
PSMD1
MED6
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
COPZ1
CGGBP1
C3orf38
ATXN2L
ZNF451
TYK2
RBM28
ZNF609
TMEM109
TLR5
IFI44L
ZMYND8
RAP2A
MYCBP2
MPV17L2
EPRS1
CSTF1
AURKA
GABARAP
DHX16
CLEC7A
NDUFA2
MTR
IK
CHD6
SLMAP
SLIRP
FBXW9
ALKBH1
ZSWIM1
UNC93B1
RAB40B
NDUFAB1
HIRIP3
HAX1
ECT2
TAF6
SLC9A1
KLHL20
IDH3B
CNPY4
ASB4
DMAP1
ARNTL
ACBD4
ABCB8
TDRKH
PPIL3
NIF3L1
MTBP
MRPL13
ASXL1
RPS12
IFIT1
RPL21
NMNAT1
MGP
LZIC
TSC1
PSAP
MTFR2
GFI1B
CEP128
AMOTL2
UBQLN1
TOMM40
UQCRC2
TUT1
ZNF668
ZNF646
SH3GL1
DAPK3
CWC22
TMED10
TCF3
NSMCE3
GFM2
FAM207A
TFB2M
CYP2R1
CNST
CCDC61
RFC4
PTBP1
KIF22
ITGB1BP1
CPSF3
CDKN2D
PRMT1
KMT2B
EHMT2
DPH2
CLEC16A
C2
ZBTB5
SPNS1
SF3B5
NGDN
ZMPSTE24
PGP
TTC21A
TMEM101
RAB11A
PTCD3
POLR1A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
C10orf143
ALKBH6
RSF1
POLR2J3
NOLC1
C12orf73
AAMDC
TMEM218
SSU72
RPS26
NUP214
GGCT
ZNF112
TRNAU1AP
TPGS1
PRKCI
KCNN3
KAT7
DNAJC14
CCDC167
BCAS2
SH3BP4
RNF187
NAA35
ATP5MC2
RABL2B
OSBPL2
INO80B
C12orf57
ADRM1
SPAG7
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
RBM6
NBEAL2
N4BP2L2
KCNH1
GTPBP3
DDX1
CCNC
B4GALT5
ANKRD40
SMARCE1
ISOC2
GOLPH3L
DARS2
CENPL
SLC4A2
RPS27
RPA2
NUCKS1
HSD17B4
CREM
CDK5
ZNF76
TIMM13
NOP53
NCBP2AS2
NCBP2
MRPL54
MORC3
HARBI1
DCP1A
CHD8
ATG13
APBA3
UQCRH
TLDC2
TAF3
LRRC41
CXXC1
RNF5
AGPAT1
WASF1
UBE2T
POM121
INTS4
HEXIM1
CHD9
CDC40
ZNF519
TRAPPC6A
MRPS17
MKNK2
CNOT1
BLOC1S3
ALG10B
PRICKLE4
LRRC45
GPKOW
FRS3
FBXO11
CSTF2T
CHMP2A
CENPX
ARL1
TNFRSF17
TLR4
TAB1
NPIPB2
MLLT1
GTF2H2
FLT3LG
EIF2S3
ZRANB2
PSMD5
FAM72D
FAM72C
U2SURP
TSACC
THADA
STIL
RHBDD3
NRL
MED11
EWSR1
DCAF11
CCT3
RABEP1
PXMP4
FBXO40
EIF4A2
PPP1R37
PARP8
LY9
GOT1
EIF1AD
BANF1
ZNF221
SLC39A3
RBSN
P4HB
OXSR1
NOTCH2
NOL6
H2BC21
H2AC21
H2AC20
CNPY2
ZNF420
TIPRL
SOD1
RBM39
PDE12
LMO7
KNL1
ZNF2
TPD52L2