ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
WDR74
ADAMTSL1
TNFRSF19
SP2
EVI5L
UNK
CCDC200
DNM2
CLPB
FAP
H4C3
VPS50
HEPACAM2
H4C11
DDX49
COPE
IFRD2
FEM1A
KATNB1
BOD1
RFX1
PHF12
NEBL
H4C14
H4C15
RBBP5
SUCLG1
FBXL19
THRAP3
TMEM115
RAB5B
AP2S1
ING4
H4C2
SP1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TEPSIN
NDUFAF8
TCEA2
PPP1R12B
RWDD1
IFTAP
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
DFFA
PAFAH2
KHSRP
SCNM1
LYSMD1
PRCC
SLX1B
SLX1A
BOLA2B
BOLA2
CALR3
C19orf44
CRTC2
MMACHC
PAK1IP1
C6orf52
TSN
NUDCD1
MRPL11
CIC
TSC2
NTHL1
SF3B6
FAM228B
MTOR
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
PHB
SUPV3L1
H2BC4
H2AC6
NUP205
SLC25A25
NAIF1
NCLN
TSNAXIP1
RANBP10
SMPD3
POLDIP3
DDX23
C1orf159
ANKHD1-EIF4EBP3
ANKHD1
SP5
AURKAIP1
RPL32
RNASEH2A
GPR108
C16orf91
ZFYVE1
ST3GAL2
UBQLN4
LAMTOR2
SNX17
EIF2B4
EHF
BOLA2-SMG1P6
TRDMT1
RPS20
BMF
SART3
ISCU
MRPL24
VIPAS39
AHSA1
BANP
TSSC4
LRCH4
FBXO24
TOM1L2
DRC3
LRRC29
ORMDL3
ZNF17
SYMPK
FOXA3
VCPIP1
C8orf44-SGK3
BUB1B
HRCT1
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
SIRT4
GTF2H4
HNRNPC
G3BP1
E2F4
OSBP
STAM
UFSP2
METTL3
NPRL2
CYB561D2
SEC11C
H4C12
SNX16
ZNF225
CCDC146
NR6A1
KHDC4
NLK
SIRT2
NFKBIB
EIF2AK3
PNKD
AAMP
TMEM11
PPRC1
PRR14
ZNF548
ZNF691
PEMT
RPS7
LARS1
RPS3
DDX39B
SRD5A1
NSUN2
ZNF383
TMTC3
CEP290
ACTR1A
CNIH4
SUPT7L
SLC4A1AP
CDK5RAP2
SUFU
MICOS13
HSD11B1L
CLN3
TRMO
TRAF7
NUCB1
MRPL53
DSTYK
MTRNR2L2
COMMD9
RPIA
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
NUBP2
TIMM21
FBXO15
STT3A
LMAN2
MCAT
PIN4
NFIB
NUF2
ATP5F1B
SCAF1
ZNF56
RTRAF
RTF2
ZC3H10
NDUFS3
KBTBD4
OAZ3
WDR46
PFDN6
UBE2I
TFPT
PRPF31
SLX4IP
PEAK1
HMG20A
DDX41
AK2
CCDC90B
COMMD1
CCT4
COX16
TTC33
TGIF1
EXD2
MTRNR2L8
GATB
INTS9
HMBOX1
SSR3
PNN
UBC
ING3
FLAD1
ZNF417
ZNF576
IRGQ
EFTUD2
CCDC103
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
MAP2K3
CELF3
VWA5A
TARS2
KRT23
H2AC19
H2AC18
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
MED27
PHB2
ZNF337
ZNF608
BTRC
TMEM94
NME1
CCDC124
SLC35B1
FAM168A
GTF3C3
SEL1L
ZNF500
ZNF776
LAMP1
TMEM160
HEXIM2
DHX33
AP1G1
RPL27
ZNF384
ZMAT2
RBL1
SLC8A1
DCP1B
KRT15
NDUFB3
FAM126B
SLC25A19
TTI2
TCERG1
PXMP2
POLE
NUDT13
PSMB6
TMEM60
PHTF2
SPHK2
RPL18
CCP110
PSMD11
TSNAX
RPS13
CIAO2A
RANBP2
FARSB
ANAPC5
COX7C
TRIP4
JOSD2
C19orf53
LIN37
RPS27A
CLHC1
RABAC1
ZSCAN5A
SCRIB
RNF121
LOC100133315
GBA
BUB3
MRPL28
SMG5
MARS1
ARHGAP9
ZNF444
TBC1D10B
MYLPF
SEC13
DLGAP1
H4C5
TMEM242
METTL26
GABPB2
RPS23
ATP6AP1L
TBL3
WDR83OS
WDR83
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
MRPL44
C12orf43
ZNF565
ZNF146
TMEM143
FAM156B
FAM156A
ZNF687
ZNF335
SRSF11
LRRC40
EIF3F
RPS6KB2
ZNF552
GEMIN6
DYNC1I2
EXOSC5
BCKDHA
NFATC2IP
SPC25
FOS
GOSR2
SAP30BP
RECQL5
HDAC9
SUGP1
MAU2
PNPLA6
PIGL
REXO1
ZC3H6
NCDN
KIAA0319L
EIF4A1
CDK8
UBAC1
IPO13
CTU1
ZNF584
RPL29
DVL2
STIP1
TPRKB
WBP2
RANGAP1
MAMSTR
FOXP2
MRPL30
MITD1
HSPA9
ZNF419
PRRG2
NOSIP
PANK4
ATG4C
SART1
ZNF165
MED6
CCDC174
RARB
CGGBP1
C3orf38
ATXN2L
STK36
RNF25
SMAD3
TMEM109
IFI44L
ZNF235
CAND1
GET3
SREK1IP1
CWC27
PEX26
MPV17L2
CSTF1
AURKA
AHCYL2
GABARAP
ZSCAN22
MRPS7
GGA3
RAB11B
ZBTB45
CD2BP2
PCBP1
C1orf109
NDUFA2
IK
C19orf48
SLMAP
FBXW9
FBXW11
NDUFAB1
HIRIP3
SEC61B
CTDP1
RPL18A
ZNF688
PNISR
TAF6
IDH3B
CNPY4
ASB4
ALKBH7
ABCB8
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
USP30
RPS12
SMG8
RPL9
LIAS
BMERB1
RPL21
NMNAT1
LZIC
CEP128
AMOTL2
SSBP1
SF3B3
COG4
UTP11
UBQLN1
GSK3A
NDUFAF5
ESF1
CWC22
TMED10
GFM2
SESN1
CEP57L1
GORAB
CENPA
RFC4
PTBP1
CDKN2D
KMT2B
EHMT2
DPH2
CLEC16A
C2
KRR1
NMT1
DCAKD
VPS25
SLC39A9
ERH
SPNS1
NGDN
ZFPL1
CDCA5
COPS7A
HBP1
PTCD3
POLR1A
C10orf143
UTP3
PPP1R12C
NOLC1
C12orf73
RPS26
NUP214
XPNPEP3
ST13
ZNF112
TPGS1
PRKCI
BCAS2
RNF187
CRADD
C12orf57
SPAG7
RBM6
N4BP2L2
GTPBP3
B4GALT5
DARS2
CENPL
EMC4
LTA4H
SLC4A2
RPA2
CREM
CDK5
TACO1
ZNF76
TIMM13
NOP53
CHD8
PPP6R1
UQCRH
LRRC41
CXXC1
RPGRIP1L
FTO
RNF5
AGPAT1
SNRPB
WASF1
HEXIM1
CDC40
MRPS23
CNOT1
BABAM1
GPKOW
CSTF2T
EIF2S3
GSTO2
ZRANB2
RHBDD3
NRL
MED11
EWSR1
DCAF11
SMARCAL1
PARP2
EIF1AD
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
RBM39
MRPL1
ZNF2
SNRPE
SERP1
EIF2A
PPWD1
NRDE2
MRM3
GLOD4
GID4
CENPK
ATPAF2
CAPN15
THYN1
ACAD8
GRWD1
TTC31
CWF19L1
CCDC142
GBF1
ADO
ZMAT5
UQCR10
RACGAP1
PHF5A
ACO2
BAG6
APOM
POLG2
ICE1
STAM2
MED20
BYSL
PABPN1
MAF1
PAN2
VPS52
RPS18
TXNL4B
DHX38
ZDHHC5
TMEM63C
PAF1
MED29
RPF1
SLC25A42
MOCS3
DPM1
MPDU1
LOC100996842
SF3A3
RGPD2
RGPD1
MTRNR2L9
THOC6
HCFC1R1
INTS1
PSMC5
FTSJ3
VEZT
FGD6
MRPL21
IGHMBP2
PWWP2A
MTRNR2L10
NDUFS7
TATDN3
NSL1
NEDD8-MDP1
NEDD8
GMPR2
H4C8
NOC4L
DDX51
POLR2E
RHOT2
CCNL1
SMARCD2
HNRNPUL1
SSBP2
PPP5D1
GUF1
CALM3
ZNF773
NOP16
HIGD2A
ARHGEF1
ZNF140
ZFYVE19
DNAJC17
TXNRD1
ATP5MG
AP2M1
TOP2A
MTRF1
EPS15
BPNT1
RCAN1
COPS7B
ZNF211
RPL37
DYNC2I2
CCL3
SYT7
ZCCHC4
RPAIN
NUP88
TBP
PSMB1
ZNF286A
INO80C
FCF1
AREL1
STK25
ABT1
H4C4
DMAC1
ZNF628
USP48
ZCCHC8
RPL35A
IQCG
CAPS2
TRAPPC9
SHPK
KLLN
CTNS
NDUFB5
MRPL47
TOR1AIP1
INTS10
HEMK1
RPL14
MYOM2
XAB2
VRK1
TJP3
COMMD2
ARHGEF2
ENPP4
CLIC5
ATP6V1G1
TOMM40L
PEX3
ALKBH3
ADAT2
KCTD5
PROSER3
HSPB6
PTDSS2
ATP2C1
STX16
KLF6
FUT10
TIMMDC1
MTRNR2L1
ADPRS
TRAPPC3
HEXA
MRPS18C
HELQ
RAP2B
LNPEP
MDM2
ABCF2-H2BE1
ABCF2
ACTL6A
PDE6D
COX7A2L
CXCR5
CCL5
TMEM256
SMCO1
NCOA7
MNT
KAT6B
ILF2
NUP153
RBM25
SNX15
KMT2C
EML2
DPP9
GCLC
ZNF226
LTN1
POLG
SKA2
PRR11
KANSL3
MRPL20
DRAP1
C11orf68
USP3
COPS8
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
NDUFA10
MED23
RABL2A
FSD2
RTEL1
FMO4
CWC25
TP63
RBM42
NFKBIL1
BBX
ATP6V1G2
UBB
PEX2
FOXK1
FAAP24
CEP89
EXOSC6
CMSS1
HOOK1
AQR
RAD51AP2
C2orf42
TPST1
SECISBP2
RAD51AP1
METTL25
CCDC59
C16orf72
C12orf4
WBP1L
WAPL
SELENOH
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
INSR
KDSR
FLOT1
CRB1
ZBTB38
SPTLC3
KIF16B
ZNF749
TIMM22
LRRC14B
SCYL3
PRPF18
SLC33A1
NR1H2
CCDC77
TBCK
MPND
AIMP1
PSMD1
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
COPZ1
ZNF451
TYK2
RBM28
ZNF609
TLR5
ZMYND8
RAP2A
MYCBP2
EPRS1
DHX16
CLEC7A
MTR
CHD6
SLIRP
ALKBH1
ZSWIM1
UNC93B1
RAB40B
HAX1
ECT2
SLC9A1
KLHL20
DMAP1
ARNTL
ACBD4
TDRKH
MTBP
MRPL13
ASXL1
IFIT1
SUDS3
MGP
TSC1
PSAP
MTFR2
GFI1B
TOMM40
UQCRC2
TUT1
ZNF668
ZNF646
SH3GL1
DAPK3
TCF3
NSMCE3
FAM207A
TFB2M
CYP2R1
CNST
CCDC61
KIF22
ITGB1BP1
CPSF3
PRMT1
ZBTB5
SF3B5
ZMPSTE24
PGP
TTC21A
TMEM101
RAB11A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
ALKBH6
RSF1
POLR2J3
AAMDC
ZNF570
TMEM218
SSU72
GGCT
WDR53
TRNAU1AP
KCNN3
KAT7
FBXO45
DNAJC14
CCDC167
SH3BP4
NAA35
ATP5MC2
RABL2B
OSBPL2
INO80B
ADRM1
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
NBEAL2
KCNH1
EXOSC4
DDX1
CCNC
ANKRD40
SMARCE1
ISOC2
GOLPH3L
RPS27
NUCKS1
HSD17B4
NCBP2AS2
NCBP2
MRPL54
MORC3
HARBI1
DCP1A
ATG13
APBA3
TLDC2
TAF3
UBE2T
POM121
INTS4
CHD9
ZNF519
TRAPPC6A
MRPS17
MKNK2
BLOC1S3
ALG10B
PRICKLE4
LRRC45
FRS3
FBXO11
CHMP2A
CENPX
ARL1
TNFRSF17
TLR4
TAB1
NPIPB2
MLLT1
GTF2H2
FLT3LG
PSMD5
FAM72D