ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466116 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◣ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
WDR74
SP2
TNFRSF19
FEM1A
DNM2
CCDC200
PAFAH2
RWDD1
UNK
IFRD2
H4C14
CLPB
H4C3
H4C15
BOD1
CHMP4B
AP2S1
MMACHC
SLC25A25
NAIF1
EVI5L
DDX49
COPE
PHB
MRPL11
RFX1
RAB5B
FBXL19
H4C11
TCEA2
PHF12
KHSRP
PES1
RBBP5
ADAMTSL1
VTI1B
BANP
ANKHD1-EIF4EBP3
ANKHD1
CIC
DFFA
PEMT
SUCLG1
GTF2H4
CALR3
C19orf44
MRPL24
RPS7
IFTAP
SP1
REXO1
SLX1B
SLX1A
BOLA2B
BOLA2
ZNF225
YJU2
FASTKD1
OSBP
TXNRD1
C16orf91
POLR3F
DZANK1
SYMPK
FOXA3
SUPV3L1
PNKD
AAMP
SCRIB
C19orf48
SMPD3
WDPCP
MDH1
NUP205
VPS50
HEPACAM2
ING4
CACTIN
PRCC
GSPT1
TMEM115
AURKAIP1
H2BC4
H2AC6
TSNAXIP1
RANBP10
RNASEH2A
NLK
SCNM1
LYSMD1
TBL3
THOC6
HCFC1R1
SLC35B1
NEBL
POLR2E
SLC35E2B
PNPLA6
IPO13
INTS9
HMBOX1
RBL1
ZNF547
TRAPPC2B
CAPN15
TOM1L2
DRC3
UBQLN4
LAMTOR2
POLDIP3
NCLN
UFSP2
PAK1IP1
C6orf52
ZNF165
VCPIP1
C8orf44-SGK3
VIPAS39
AHSA1
ZFYVE1
SSR3
MAPKAPK5
DSTYK
ZNF268
ORMDL3
OAZ3
MRPL21
IGHMBP2
BOLA2-SMG1P6
HNRNPL
PSMD11
ZNF687
RPIA
SEC61B
GALM
SART3
ISCU
TSN
USP48
KAT6B
ZNF383
STT3A
SCAF1
BUB1B
RANBP2
NUP153
TSC2
NTHL1
RPS20
TMEM94
H4C2
CCP110
THRAP3
PPP1R12B
INVS
ERP44
TFPT
PRPF31
LMAN2
ZNF444
CCDC90B
DYNC1I2
ZNF235
PCBP1
CCAR2
ZNF576
IRGQ
TBL1X
ING3
LRRC29
RPL32
TMEM160
PRRG2
NOSIP
MRPS7
GGA3
NMT1
DCAKD
TSNAX
COPS8
HNRNPC
LARS1
C1orf159
DDX23
SIRT4
MICOS13
HSD11B1L
VEZT
FGD6
NUF2
COMMD1
CCT4
EXOSC5
BCKDHA
GET3
SESN1
CEP57L1
RTEL1
CWC25
ZNF143
KRR1
FARSB
RBM42
ZNF691
ZNF335
ELOC
STAM
RPS27A
CLHC1
NDUFS3
KBTBD4
NDUFS7
STAM2
DYNC2I2
STK36
RNF25
UBAC1
SIRT2
NFKBIB
PRORP
PPP2R3C
FLOT1
MTOR
TRMO
PPRC1
LRCH4
FBXO24
SF3A3
ZNF749
RNF121
LOC100133315
H4C8
ZNF773
TBCK
AIMP1
C19orf53
LSG1
PSMD1
TEPSIN
NDUFAF8
RAB11B
TACO1
TIMM21
FBXO15
ZBTB45
PABPN1
KATNB1
ISY1-RAB43
ISY1
ZSCAN22
SF3B3
COG4
G3BP1
ADPRS
MTR
GOSR2
RPL9
LIAS
PNN
MTBP
MRPL13
ASXL1
UBE2I
RPGRIP1L
FTO
NEDD8-MDP1
NEDD8
GMPR2
SLC25A19
JOSD2
NR6A1
NDUFB3
FAM126B
PSMC5
FTSJ3
AP2M1
UQCRC2
FLAD1
CCDC174
TM9SF4
H4C5
TCF3
EFTUD2
CCDC103
SLC39A9
ERH
H2AC19
H2AC18
SF3B5
RPS3
DDX39B
PPP6R1
RABAC1
SSU72
HDAC9
UFD1
CDC45
NPRL2
CYB561D2
HEXIM2
ADO
UTP11
BMERB1
INO80B
SREK1IP1
CWC27
HNRNPUL1
TMEM60
PHTF2
ZNF140
ABCF2-H2BE1
ABCF2
HSPA9
XPNPEP3
ST13
NDC80
METTL4
TATDN3
NSL1
VPS52
RPS18
PIN4
CHMP2A
GSK3A
U2SURP
TSSC4
SNX16
CNPY2
SPSB3
NUBP2
CTDP1
HBP1
WDR46
PFDN6
ZSCAN5A
MRPL53
SUGP1
MAU2
SLC8A1
SNRPB
COMMD2
PARP2
PSMB5
PI4KB
MRPS11
MRPL46
MTRNR2L2
MTRNR2L8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C12
FAP
ST3GAL2
TARS2
SF3B6
FAM228B
NUDCD1
FAM168A
ZNF17
CCDC146
GPR137
GATB
RGPD2
RGPD1
GPR108
PRR14
SNX17
EIF2B4
MTRNR2L9
BMF
SP5
CYCS
GBA
CRTC2
COMMD9
HRCT1
STIP1
NUP107
AK2
TMEM11
COX16
KHDC4
EHF
EIF2AK3
ZNF417
ALKBH7
E2F4
ACTR1A
PIGL
UBR2
DDX41
NUCB1
KBTBD6
CNIH4
PANK4
MED27
SPHK2
RPL18
TRDMT1
ANAPC5
SUPT7L
SLC4A1AP
METTL3
SRSF11
LRRC40
SLX4IP
TMTC3
CEP290
SEC11C
INTS1
TTI2
EIF3F
LIN37
SMG8
NME1
SSBP1
TMEM242
ZSWIM3
ACOT8
PWWP2A
PHB2
NUDT13
AHCYL2
NFIB
MTRNR2L10
ATP5F1B
ZNF337
COX7C
METTL26
PSMB6
CDK5RAP2
TCERG1
VWA5A
GTF3C3
ZFPL1
CDCA5
TBC1D10B
MYLPF
BUB3
KRT15
ZNF548
MRPL28
CLN3
ATG4C
RPS6KB2
ZMAT2
MRPL30
MITD1
CAND1
NOC4L
DDX51
SEL1L
C12orf43
NDUFAF5
ESF1
BABAM1
RHOT2
CCNL1
EMC4
TRAF7
ZC3H10
SMARCD2
DHX8
CTU1
CCDC124
KRT23
EXD2
UTP3
ZNF500
SEC13
RPL18A
ZNF776
EXOC4
GSTO2
VPS25
SMARCAL1
PPP1R12C
SRD5A1
NSUN2
SSBP2
TRIP4
PPP5D1
GUF1
CALM3
NOP16
HIGD2A
ARHGEF1
DLGAP1
ZFYVE19
DNAJC17
ATP5MG
CIAO2A
CD2BP2
SMAD3
CRADD
TOP2A
MTRF1
EPS15
BPNT1
RCAN1
FBXW11
COPS7B
ZNF211
RPL37
CCL3
COPS7A
SYT7
ZCCHC4
SUFU
RPAIN
NUP88
CENPA
TBP
PSMB1
ZNF286A
INO80C
FCF1
AREL1
STK25
ABT1
H4C4
USP30
RARB
ZNF688
MAF1
DMAC1
ZNF628
ZCCHC8
RPL35A
IQCG
CAPS2
RPL27
TRAPPC9
SHPK
KLLN
CTNS
NDUFB5
MRPL47
TOR1AIP1
INTS10
PNISR
MRPS23
HEMK1
GBF1
RPL14
MYOM2
GABPB2
XAB2
GORAB
VRK1
TJP3
NR1H3
ACP2
C1orf109
ARHGEF2
NVL
TMEM63C
ENPP4
CLIC5
LTA4H
ATP6V1G1
TXNL4B
THYN1
DHX38
ACAD8
TOMM40L
PEX3
ALKBH3
ADAT2
KCTD5
PROSER3
HSPB6
PTDSS2
ATP2C1
STX16
TPRKB
KLF6
FUT10
TIMMDC1
MTRNR2L1
TRAPPC3
HEXA
MRPS18C
HELQ
RAP2B
LNPEP
MDM2
MCAT
ACTL6A
ZNF56
RTRAF
RTF2
PEX26
PDE6D
COX7A2L
PEAK1
HMG20A
CXCR5
CCL5
TMEM256
TTC33
TGIF1
SMCO1
UBC
NCOA7
MNT
ILF2
RBM25
NDUFC2-KCTD14
NDUFC2
MAP2K3
CELF3
SNX15
KMT2C
EML2
DPP9
GCLC
ZNF608
BTRC
ZNF226
LTN1
POLG
LAMP1
DHX33
AP1G1
ZNF384
SKA2
PRR11
KANSL3
MRPL20
MRPL1
DCP1B
DRAP1
C11orf68
PXMP2
POLE
USP3
RPS13
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
NDUFA10
MED23
RABL2A
FSD2
FMO4
TP63
SMG5
NFKBIL1
MARS1
BBX
ATP6V1G2
ARHGAP9
UBB
PEX2
FOXK1
FAAP24
CEP89
RPS23
EXOSC6
CMSS1
ATP6AP1L
WDR83OS
WDR83
HOOK1
FDPS
AQR
RAD51AP2
MRPL44
C2orf42
ZNF565
ZNF146
TPST1
TMEM143
SECISBP2
RAD51AP1
METTL25
FAM156B
FAM156A
CCDC59
C16orf72
C12orf4
ZNF552
WBP1L
WAPL
SELENOH
GEMIN6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFATC2IP
SPC25
INSR
FOS
SAP30BP
RECQL5
KDSR
CRB1
ZC3H6
ZBTB38
SPTLC3
NCDN
KIF16B
KIAA0319L
EIF4A1
CDK8
ZNF584
TIMM22
RPL29
LRRC14B
DVL2
WBP2
SCYL3
RANGAP1
PRPF18
MAMSTR
FOXP2
ZNF419
SLC33A1
NR1H2
CCDC77
SART1
MPND
MED6
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
COPZ1
CGGBP1
C3orf38
ATXN2L
ZNF451
TYK2
RBM28
ZNF609
TMEM109
TLR5
IFI44L
ZMYND8
RAP2A
MYCBP2
MPV17L2
EPRS1
CSTF1
AURKA
GABARAP
DHX16
CLEC7A
NDUFA2
IK
CHD6
SLMAP
SLIRP
FBXW9
ALKBH1
ZSWIM1
UNC93B1
RAB40B
NDUFAB1
HIRIP3
HAX1
ECT2
TAF6
SLC9A1
KLHL20
IDH3B
CNPY4
ASB4
DMAP1
ARNTL
ACBD4
ABCB8
TDRKH
PPIL3
NIF3L1
RPS12
IFIT1
SUDS3
RPL21
NMNAT1
MGP
LZIC
TSC1
PSAP
MTFR2
GFI1B
CEP128
AMOTL2
UBQLN1
TOMM40
TUT1
ZNF668
ZNF646
SH3GL1
DAPK3
CWC22
TMED10
NSMCE3
GFM2
FAM207A
TFB2M
CYP2R1
CNST
CCDC61
RFC4
PTBP1
KIF22
ITGB1BP1
CPSF3
CDKN2D
PRMT1
KMT2B
EHMT2
DPH2
CLEC16A
C2
ZBTB5
SPNS1
NGDN
ZMPSTE24
PGP
TTC21A
TMEM101
RAB11A
PTCD3
POLR1A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
C10orf143
ALKBH6
RSF1
POLR2J3
NOLC1
C12orf73
AAMDC
ZNF570
TMEM218
RPS26
NUP214
GGCT
ZNF112
WDR53
TRNAU1AP
TPGS1
PRKCI
KCNN3
KAT7
FBXO45
DNAJC14
CCDC167
BCAS2
SH3BP4
RNF187
NAA35
ATP5MC2
RABL2B
OSBPL2
C12orf57
ADRM1
SPAG7
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
RBM6
NBEAL2
N4BP2L2
KCNH1
GTPBP3
EXOSC4
DDX1
CCNC
B4GALT5
ANKRD40
SMARCE1
ISOC2
GOLPH3L
DARS2
CENPL
SLC4A2
RPS27
RPA2
NUCKS1
HSD17B4
CREM
CDK5
ZNF76
TIMM13
NOP53
NCBP2AS2
NCBP2
MRPL54
MORC3
HARBI1
DCP1A
CHD8
ATG13
APBA3
UQCRH
TLDC2
TAF3
LRRC41
CXXC1
RNF5
AGPAT1
WASF1
UBE2T
POM121
INTS4
HEXIM1
CHD9
CDC40
ZNF519
TRAPPC6A
MRPS17
MKNK2
CNOT1
BLOC1S3
ALG10B
PRICKLE4
LRRC45
GPKOW
FRS3
FBXO11
CSTF2T
CENPX
ARL1
TNFRSF17
TLR4
TAB1
NPIPB2
MLLT1
GTF2H2
FLT3LG
EIF2S3
ZRANB2
PSMD5
FAM72D
FAM72C
TSACC
THADA
STIL
RHBDD3
NRL
MED11
EWSR1
DCAF11
CCT3
RABEP1
PXMP4
FBXO40
EIF4A2
PPP1R37
PARP8
LY9
GOT1
FBH1
EIF1AD
BANF1
ANKRD16
ZNF221
SLC39A3
RBSN
P4HB
OXSR1
NOTCH2
NOL6
H2BC21
H2AC21
H2AC20
ZNF420
TIPRL
SOD1
RBM39
PDE12
LMO7
KNL1
ZNF2
TPD52L2
SNRPE
SETD1A