ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

WDR74
MTRNR2L2
SNX16
ADAMTSL1
SPATC1L
TNFRSF19
MTRNR2L8
SP2
H4C14
H4C15
CLPB
KATNB1
DDX23
BOD1
EVI5L
H4C11
VPS50
HEPACAM2
UNK
DNM2
TMEM115
H4C3
CCDC200
CHMP4B
TCEA2
DDX49
COPE
IFRD2
RWDD1
SP1
TBL1X
PHF12
FBXL19
H2BC4
THRAP3
FEM1A
POLR3F
DZANK1
MAPKAPK5
AP2S1
H4C2
WDPCP
MDH1
TSN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PAFAH2
GALM
CIC
SCNM1
LYSMD1
TSNAXIP1
RANBP10
PRCC
FAP
ST3GAL2
KHSRP
RBBP5
PHB
SUCLG1
YJU2
RPS20
MRPL24
BANP
NEBL
TEPSIN
NDUFAF8
DFFA
RFX1
CCDC90B
FAM168A
SMPD3
TSC2
NTHL1
IFTAP
PPRC1
CALR3
C19orf44
LRRC29
NUDCD1
NCLN
TOM1L2
DRC3
MMACHC
PAK1IP1
C6orf52
RAB5B
ANKHD1-EIF4EBP3
ANKHD1
PPP1R12B
GSPT1
ZFYVE1
ORMDL3
HNRNPC
SPSB3
NUBP2
LRCH4
FBXO24
GATB
INVS
ERP44
PES1
COMMD9
SLC25A25
NAIF1
VIPAS39
AHSA1
NDC80
METTL4
MTOR
PEMT
RPS3
ZNF17
CCDC146
COX16
PIGL
ING4
ZNF417
PANK4
BMF
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
H4C12
HRCT1
PRR14
TMEM11
PIN4
SP5
SRSF11
LRRC40
C16orf91
PNKD
AAMP
KHDC4
INTS1
SF3B6
FAM228B
BUB1B
STIP1
NUP107
OSBP
ZNF268
GPR137
DDX41
MED27
GUF1
NOP16
HIGD2A
ZNF547
TRAPPC2B
GBA
TARS2
INTS9
HMBOX1
TACO1
TTI2
DYNC1I2
NUCB1
MTRF1
LARS1
TFPT
PRPF31
ELOC
CNIH4
TMEM242
ZFPL1
CDCA5
SCAF1
SNX17
EIF2B4
NOC4L
DDX51
RCAN1
RPS7
SF3A3
E2F4
RABL2A
GTF2H4
RANBP2
ZNF211
PNPLA6
RPL32
SYMPK
FOXA3
ZNF687
CYCS
C19orf53
NUDT13
CRTC2
EHF
NEDD8-MDP1
NEDD8
GMPR2
ZCCHC4
ZNF165
UBQLN4
LAMTOR2
TSSC4
STAM
PHB2
TBP
PSMB1
TMTC3
CEP290
KBTBD6
ZSWIM3
ACOT8
COX7C
CCNL1
FCF1
AREL1
H4C5
TIMM21
FBXO15
EMC4
STK25
ABT1
NUP205
METTL3
ATG4C
MRPL11
COMMD1
CCT4
TBL3
ZNF337
PSMB6
CAND1
NDUFAF5
ESF1
DMAC1
ZNF628
THOC6
HCFC1R1
BUB3
ZNF225
WDR46
PFDN6
SEC11C
SMG8
MRPL30
MITD1
ZCCHC8
NDUFS3
KBTBD4
NUF2
MICOS13
HSD11B1L
NR6A1
TCERG1
RPS6KB2
DDX39B
MRPL53
MRPL28
OAZ3
GPR108
SSBP2
SHPK
CTNS
NDUFB5
MRPL47
SLC35E2B
SPHK2
RPL18
LIN37
NFIB
GTF3C3
KRT15
RHOT2
GSTO2
SMARCAL1
TOR1AIP1
ANAPC5
PSMD11
VWA5A
ZFYVE19
DNAJC17
HEMK1
ZNF383
NPRL2
CYB561D2
ATP5F1B
C12orf43
ATP5MG
ZSCAN22
HDAC9
UBAC1
RPL14
SIRT4
AK2
ACTR1A
GOSR2
ZMAT2
VRK1
TRDMT1
ZNF140
TATDN3
NSL1
CTU1
PPP1R12C
UFD1
CDC45
PSMC5
FTSJ3
POLDIP3
PRRG2
NOSIP
UBR2
VPS25
TMEM94
STT3A
ALKBH7
SEL1L
CCDC174
SMARCD2
SLX4IP
ATP6V1G1
FARSB
AHCYL2
PEX3
ADAT2
SSR3
SIRT2
NFKBIB
UFSP2
ZNF444
CDK5RAP2
RPL37
ZNF286A
KCTD5
MRPS7
GGA3
C1orf159
VCPIP1
C8orf44-SGK3
PTDSS2
LSG1
CRADD
EFTUD2
CCDC103
TIMMDC1
NMT1
DCAKD
SEC13
FASTKD1
HEXIM2
SUGP1
MAU2
G3BP1
TMEM60
PHTF2
CLN3
TRAPPC3
HEXA
ZNF691
KRT23
ZNF773
ARHGEF1
ZNF548
GSK3A
LMAN2
POM121
AURKAIP1
CCAR2
FLAD1
EXD2
CD2BP2
TSNAX
ZC3H10
ZNF500
COPS7B
PDE6D
RPIA
NME1
SLC8A1
ZNF776
COX7A2L
TBC1D10B
MYLPF
BABAM1
SMAD3
COPS7A
VEZT
FGD6
DLGAP1
RPL18A
ZNF420
ZNF143
SART3
ISCU
FBXW11
SUPT7L
SLC4A1AP
TRAF7
RBM25
ZNF335
KRR1
SNX15
SUPV3L1
METTL26
CIAO2A
ZNF226
LTN1
CACTIN
H4C8
GBF1
SLC35B1
MRPL20
EIF3F
PWWP2A
TMEM63C
SCRIB
EXOC4
NBPF15
RNF121
LOC100133315
DYNC2I2
CTDP1
ZNF688
PEX2
EXOSC6
EIF2AK3
ZNF235
TXNL4B
DHX38
MRPL21
IGHMBP2
SECISBP2
METTL25
CCDC59
RARB
ZBTB45
SCYL3
PABPN1
THYN1
ACAD8
SRD5A1
NSUN2
RPGRIP1L
FTO
CCDC124
UTP3
DHX8
EXOSC5
BCKDHA
H2AC6
RGPD2
RGPD1
MTRNR2L9
RNASEH2A
VTI1B
NLK
DSTYK
REXO1
ISY1-RAB43
ISY1
RAB11B
SSBP1
C19orf48
HNRNPL
CCP110
MTRNR2L10
NDUFS7
ING3
SEC61B
UBE2I
ZNF576
IRGQ
IPO13
RPS27A
CLHC1
POLR2E
HNRNPUL1
CAPN15
RPL9
RBL1
LIAS
STK36
RNF25
TRMO
TRIP4
PPP6R1
PPP5D1
CALM3
TXNRD1
TMEM160
AP2M1
TOP2A
EPS15
STAM2
BPNT1
PNN
CCL3
SYT7
SLC39A9
PCBP1
ERH
SUFU
RPAIN
PRORP
PPP2R3C
NUP88
CENPA
H2AC19
H2AC18
INO80C
GET3
SLC25A19
NDUFB3
FAM126B
H4C4
USP30
JOSD2
MAF1
SESN1
CEP57L1
USP48
TM9SF4
RPL35A
IQCG
RABAC1
CAPS2
RPL27
TRAPPC9
KLLN
INTS10
PNISR
MRPS23
SF3B3
COG4
MYOM2
GABPB2
XAB2
GORAB
TJP3
NR1H3
HSPA9
ACP2
SREK1IP1
CWC27
ZSCAN5A
COMMD2
C1orf109
ARHGEF2
NVL
BMERB1
UTP11
ENPP4
CLIC5
LTA4H
TOMM40L
ALKBH3
PROSER3
HSPB6
ATP2C1
STX16
TPRKB
XPNPEP3
ST13
KLF6
FUT10
MTRNR2L1
ADPRS
MRPS18C
HELQ
RAP2B
HBP1
LNPEP
MDM2
MCAT
ABCF2-H2BE1
ABCF2
ADO
ACTL6A
ZNF56
RTRAF
RTF2
PEX26
PEAK1
HMG20A
CXCR5
CCL5
TMEM256
TTC33
TGIF1
SMCO1
UBC
NCOA7
MNT
KAT6B
SNRPB
VPS52
RPS18
ILF2
NUP153
NDUFC2-KCTD14
NDUFC2
MAP2K3
CELF3
KMT2C
EML2
DPP9
GCLC
ZNF608
BTRC
POLG
PARP2
LAMP1
DHX33
AP1G1
ZNF384
SKA2
PRR11
KANSL3
MRPL1
DCP1B
DRAP1
C11orf68
PXMP2
POLE
USP3
COPS8
RPS13
LAS1L
HSD11B1
CDYL
CDC20
PSMD4
NDUFA10
MED23
FSD2
RTEL1
FMO4
CWC25
TP63
SMG5
RBM42
NFKBIL1
MARS1
BBX
ATP6V1G2
ARHGAP9
UBB
FOXK1
FAAP24
CEP89
RPS23
CMSS1
ATP6AP1L
WDR83OS
WDR83
HOOK1
FDPS
AQR
RAD51AP2
MRPL44
C2orf42
ZNF565
ZNF146
TPST1
TMEM143
RAD51AP1
FAM156B
FAM156A
C16orf72
C12orf4
ZNF552
WBP1L
WAPL
SELENOH
GEMIN6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NFATC2IP
SPC25
INSR
FOS
SAP30BP
RECQL5
KDSR
FLOT1
CRB1
ZC3H6
ZBTB38
SPTLC3
NCDN
KIF16B
KIAA0319L
EIF4A1
CDK8
ZNF749
ZNF584
TIMM22
RPL29
LRRC14B
DVL2
WBP2
RANGAP1
PRPF18
MAMSTR
FOXP2
ZNF419
SLC33A1
NR1H2
CCDC77
TBCK
SART1
MPND
AIMP1
PSMD1
MED6
LUC7L2
GALK2
FMC1-LUC7L2
FMC1
COPS2
STOML2
MFAP3L
COPZ1
CGGBP1
C3orf38
ATXN2L
ZNF451
TYK2
RBM28
ZNF609
TMEM109
TLR5
IFI44L
ZMYND8
RAP2A
MYCBP2
MPV17L2
EPRS1
CSTF1
AURKA
GABARAP
DHX16
CLEC7A
NDUFA2
MTR
IK
CHD6
SLMAP
SLIRP
FBXW9
ALKBH1
ZSWIM1
UNC93B1
RAB40B
NDUFAB1
HIRIP3
HAX1
ECT2
TAF6
SLC9A1
KLHL20
IDH3B
CNPY4
ASB4
DMAP1
ARNTL
ACBD4
ABCB8
TDRKH
PPIL3
NIF3L1
MTBP
MRPL13
ASXL1
RPS12
IFIT1
SUDS3
RPL21
NMNAT1
MGP
LZIC
TSC1
PSAP
MTFR2
GFI1B
CEP128
AMOTL2
UBQLN1
TOMM40
UQCRC2
TUT1
ZNF668
ZNF646
SH3GL1
DAPK3
CWC22
TMED10
TCF3
NSMCE3
GFM2
FAM207A
TFB2M
CYP2R1
CNST
CCDC61
RFC4
PTBP1
KIF22
ITGB1BP1
CPSF3
CDKN2D
PRMT1
KMT2B
EHMT2
DPH2
CLEC16A
C2
ZBTB5
SPNS1
SF3B5
NGDN
ZMPSTE24
PGP
TTC21A
TMEM101
RAB11A
PTCD3
POLR1A
LOC101927572
GTF2H2C_2
GTF2H2C
GORASP1
FBXO38
C10orf143
ALKBH6
RSF1
POLR2J3
NOLC1
C12orf73
AAMDC
ZNF570
TMEM218
SSU72
RPS26
NUP214
GGCT
ZNF112
WDR53
TRNAU1AP
TPGS1
PRKCI
KCNN3
KAT7
FBXO45
DNAJC14
CCDC167
BCAS2
SH3BP4
RNF187
NAA35
ATP5MC2
RABL2B
OSBPL2
INO80B
C12orf57
ADRM1
SPAG7
SNAP47
SACM1L
JMJD4
FRYL
FDXR
DDI2
CDC23
RBM6
NBEAL2
N4BP2L2
KCNH1
GTPBP3
EXOSC4
DDX1
CCNC
B4GALT5
ANKRD40
SMARCE1
ISOC2
GOLPH3L
DARS2
CENPL
SLC4A2
RPS27
RPA2
NUCKS1
HSD17B4
CREM
CDK5
ZNF76
TIMM13
NOP53
NCBP2AS2
NCBP2
MRPL54
MORC3
HARBI1
DCP1A
CHD8
ATG13
APBA3
UQCRH
TLDC2
TAF3
LRRC41
CXXC1
RNF5
AGPAT1
WASF1
UBE2T
INTS4
HEXIM1
CHD9
CDC40
ZNF519
TRAPPC6A
MRPS17
MKNK2
CNOT1
BLOC1S3
ALG10B
PRICKLE4
LRRC45
GPKOW
FRS3
FBXO11
CSTF2T
CHMP2A
CENPX
ARL1
TNFRSF17
TLR4
TAB1
NPIPB2
MLLT1
GTF2H2
FLT3LG
EIF2S3
ZRANB2
PSMD5
FAM72D
FAM72C
U2SURP
TSACC
THADA
STIL
RHBDD3
NRL
MED11
EWSR1
DCAF11
CCT3
RABEP1
PXMP4
FBXO40
EIF4A2
PPP1R37
PARP8
LY9
GOT1
FBH1
EIF1AD
BANF1
ANKRD16
ZNF221
SLC39A3
RBSN
P4HB
OXSR1
NOTCH2
NOL6
H2BC21
H2AC21
H2AC20
CNPY2
TIPRL
SOD1
RBM39
PDE12
LMO7
KNL1
ZNF2
TPD52L2
SNRPE
SETD1A
SERP1
EIF2A
UCHL5