ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2188684 | IMR-90
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◣ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ADI1
ANKRD26
STK32C
LRRC27
PHF12
SPRTN
EXOC8
NBEAL2
CCDC12
RAB35
SMARCA4
SUGP2
ARMC6
N6AMT1
FAM222B
ENTPD6
BNIP3
POU2F1
C10orf88
DNAJA3
VPS26B
NCAPD3
XRCC5
EID2B
FAM220A
PRMT2
PRRT2
PAGR1
MVP
SAMHD1
ACTN4
ATP6V0E2
NDEL1
TK2
CKLF-CMTM1
CKLF
TOLLIP
MCRS1
CBX5
HNRNPA1
KHDRBS1
ZBTB17
MTRNR2L8
GTF3A
LONP1
CATSPERD
RCBTB2
APOLD1
CRTC1
NBPF1
TUBD1
RPS6KB1
NPRL3
CENPBD1
SDHA
CCDC127
TMEM143
SYNGR4
SPPL2B
LSM7
VDAC3
ITPA
DDRGK1
SAYSD1
TMEM141
CCDC183
MTRNR2L2
MSH3
DHFR
EEF1AKMT1
KDM8
PRR30
PREB
FBRS
DAGLB
OSCAR
NDUFA3
EHMT1
HNRNPL
IFNAR1
CBY3
MIS18A
SUMF2
C6orf136
FAM24B
RANBP3
FAM122A
RAD21
MOK
NAGK
PITPNB
CHMP7
HNRNPH1
RAB18
FAM98A
SPOP
POLR2J2
GATD3B
GATD3A
PPP2CA
NELFCD
CXorf38
PATL1
SMIM11B
SMIM11A
THAP7
USP10
RBM17
TMEM139
CASP2
CDC34
SHBG
FXR2
MRPL54
APBA3
HP1BP3
SRSF10
WIPI2
LUC7L2
FMC1-LUC7L2
FMC1
PDRG1
DPF2
XRCC2
CDC7
SOD2
ACAT2
ZNF583
POLRMT
TMEM250
ARFGAP3
FAM71E1
EMC10
UBE2M
CHMP2A
SELENOI
ADGRF3
DLGAP4
PTK2
TMEM63B
MRPL14
MYPOP
SLC2A11
PDXDC1
KCNN1
ZC3H8
AMZ2
SARS1
POLR2J
BLOC1S4
CHD1
MAP2K7
ZMYM4
MRPL45
NDUFA8
MORN5
ALKBH5
LOC100287896
LIPT2
PALB2
DCTN5
SAFB
SAFB2
DYNC2I1
NOB1
ZNF12
DUX4
SLX4
OARD1
NFYA
GMCL1
STX1A
XPO5
POLH
HEXIM1
SMG9
CAPZA2
RPL36
NUDCD2
HMMR
TOPORS
SMIM27
HASPIN
LRPAP1
CCNQ
C8orf48
WDR4
POLA2
MTCH2
TAX1BP3
EMC6
RABIF
FUT8
PTTG1IP
CYTH1
HINFP
ESRRA
CATSPERZ
CNOT4
LOC100289561
NUP50
AP3B1
KCTD13
YEATS4
THAP5
DNAJB9
SNAP47
JMJD4
POLR2J3
MAPKAP1
USF2
RNF32
CCSER2
USO1
IQCC
CCDC28B
DCDC2B
PMF1-BGLAP
PMF1
UPF1
CLIP4
MAMSTR
NANP
MSL2
SLC30A4
DCAF8
CLN8
BANP
RRP1
PPME1
C2CD3
RGPD2
RGPD1
RAD23A
DFFB
CEP104
LIG4
ABHD13
SMIM14
CC2D1A
C19orf57
PPP6R1
ABCF3
ZBTB14
FAM120B
SCAF11
METTL22
MTHFSD
MAN1B1
ABCA3
FBXO31
MAP1LC3B
PAPOLA
TIGD6
HMGXB3
RNF149
TMEM63A
PIAS4
SH3YL1
ACP1
GNPTAB
RPP38
ZNF747
RALGAPB
NUP107
GZF1
CEP20
DNMT1
SREBF1
HINT1
SRSF1
TMED4
TDP2
ACOT13
WRNIP1
COL23A1
ZMYM1
FAM200B
KDM3A
TDRD7
RTL10
GNB1L
ENDOV
MBD1
FADD
DHDDS
VPS13A
ASNSD1
ASDURF
LINS1
ASB7
SBNO1
STS
PUDP
TMEM104
NAT9
ZNF576
IRGQ
SRD5A1
NSUN2
CBARP
ATP5F1D
ROPN1L
STX8
CFAP52
UGGT2
ZNF248
POFUT2
ZNF652
SELENOT
UROS
BCCIP
GOPC
INTS13
FGFR1OP2
NAPB
ARPC2
DTX2
SNRNP70
TMEM70
ELOC
FZR1
IPMK
CISD1
COQ3
LRFN3
MKNK2
UIMC1
SPECC1L
APC
EID1
INTS7
DTL
FRG2C
ZNF473
VRK3
PINK1
BCAT1
CCT5
ATPSCKMT
CRB1
NUP62
IL4I1
ATF5
PCIF1
U2AF2
MINK1
SPDYE14
SPDYE10P
TRMO
MRS2
TENT4A
WWP1
TAOK2
PVR
FRG2
PHF23
GABARAP
SSH1
BSN
SMARCC1
MORF4L1
LAGE3
TBC1D7-LOC100130357
TBC1D7
MPHOSPH6
CTBP1
USP21
GDF5
CEP250
PUSL1
ACAP3
SCAPER
HBS1L
ANO10
ABHD5
GOLGA1
ZNF526
CASTOR2
TIA1
TMEM120B
GPATCH8
ADAM10
PUM2
PLEKHA8
FKBP14
SIN3B
TRIM39-RPP21
TRIM39
CDC42BPB
KIFAP3
SCML1
SEC16A
C9orf163
THOC3
PRELID3B
MTG1
PPA1
TCF25
DYRK1B
WDR18
ARMC2
SPEN
KATNIP
GTF3C1
VARS2
PPP1CB
PAPSS1
ERCC6
P3H1
TMEM109
RFXANK
BORCS8-MEF2B
BORCS8
CENPS-CORT
CENPS
KIF6
TASOR2
EPS15L1
UPF2
RBBP7
TCTA
RHOA
BRICD5
ALG8
SEH1L
PGP
C8orf37
MAGI1
OPA1
MYL5
ATP5ME
UTP18
MBTD1
NFXL1
COX6A1
SPATA20
TRAM1L1
TFB2M
CNST
ZFAND3
PIGX
CEP19
NF1
SPATA4
GRB2
XPO7
ZNF329
MBD3
GAA
SLC39A10
FKBP1A
WDR13
TRAM1
ZDHHC16
EXOSC1
ZNF667
ING1
NADK
NDUFS6
MRPL36
SHC2
C1orf74
TRIM37
CIPC
FBXO48
APLF
KLHL22
TIGD1
EIF4E2
PRPF39
C11orf80
TERF2IP
KARS1
COP1
NAPG
HSF1
BOP1
MFSD4B
CCDC130
C15orf40
CAPN7
DHX34
CCDC150
BIRC6
SNURF
SNRPN
TMEM182
ZNF664-RFLNA
ZNF664
CCDC92
CCDC93
ZHX3
RAB1A
SOS1
CDC42EP4
HSP90AA1
SLC30A5
DNAJC28
C17orf97
WDR5B
PAXIP1
PTBP1
BCAR1
FAM227A
CBY1
SLC35B3
LRBA
KANK1
MRNIP
MARS2
SMAP2
URGCP
UBE2D4
MRPL24
SRRM1
ZNF638
PRDM4
ALAS1
CCDC200
TBC1D32
NR1D1
THOP1
SGTA
MRPS18C
HELQ
WDR74
PTPN4
MAP2K2
MTRNR2L1
LAMP1
NPM1
SSNA1
ANAPC2
CACYBP
EIF2D
NME1
NPAS4
TOMM20
CCDC86
TRMT61B
AKAP1
TOR1AIP2
TOR1AIP1
SLC35E2A
NUP214
POM121
GH1
TMEM209
SSMEM1
UNG
ALKBH2
PARK7
PBLD
HNRNPH3
NOC4L
DDX51
GPAM
SLC35E2B
TBC1D5
SPDL1
DENR
ERCC6L2
MTRNR2L9
HSD17B8
SEC22C
CWC25
TBL3
RBAK-RBAKDN
RBAK
CDC5L
RBM42
UTP25
RSL1D1
SLC39A7
RXRB
MRPL55
EIF5A
NUF2
PEMT
MAGOHB
RPS7
MPC2
DCAF6
CYCS
ZBTB45
SYS1
C5orf24
SLC25A11
RNF167
STYXL1
MDH2
JOSD2
ASPDH
HAUS5
TMEM43
CHCHD4
SRCAP
LOC730183
CBWD5
DSN1
C6orf89
RBM39
SCAND1
WDR43
MRM3
GLOD4
RPL8
TRIAP1
PPP2R3B
CBWD3
POP7
DRG2
GID8
DIDO1
CELSR3
AURKAIP1
GTF2H3
EIF2B1
NBPF3
MAPKAPK5
FIP1L1
SKA3
MRPL57
NOP14
GRK4
STXBP4
RPL10A
COX11
MRPL21
IGHMBP2
PUF60
PARP6
AHCTF1
MARCHF7
CBWD6
TMX1
MAP3K7CL
CCT8
CIAO3
AASDH
TSEN2
TMEM18
CPLANE2
RNF130
CFAP410
ZZZ3
LANCL2
TIPIN
COPB2
ZNF286A
GPBP1
PCGF1
LBX2
PRKDC
MCM4
PPP4R3B
ZBTB2
RPL12
LRSAM1
BTBD10
CCNC
TTC32
RFX1
PFKFB4
DCP1A
NUP153
CLPTM1L
B9D1
E2F6
TAOK1
XPC
LSM3
FAF1
WWOX
RPS29
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
RPS19
SF3A3
LTV1
KIF22
RPS11
RPRD2
TUBGCP5
MAD1L1
PSMB2
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
LPXN
NAT10
MLX
COASY
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
SMG5
PCBP1
ADPGK
CDK12
EIF2S2
DHX9
RPS6
PSMD5
SRRT
NRF1
AP2B1
ZNF34
RAD23B
UBE2D3
SLC15A4
SRSF11
INO80C
UBR3
METTL5
ARF4
ZNF692
VMAC
NDUFA11
PHF7
BAP1
SNX5
MGME1
NOL11
ABHD10
SCAMP5
STX16
XKR7
NCOA4
COQ9
CIAPIN1
TMEM79
RBBP5
KAZALD1
EHD1
SUPT5H
SPG7
LSM12
G6PC3
HSPA4
ZNF296
GEMIN7
TMX3
CCDC102B
ZC3H14
EIF2S1
ATP6V1D
CEP350
ERGIC2
GPAA1
EXOSC4
VPS13C
ANKFY1
ECHS1
VMP1
PTRH2
QRICH1
NAA38
DLD
SMG7
TMED3
YIPF2
TIMM29
CD320
UQCR11
ASXL1
MRRF
RNF151
ELP6
ZNF182
SPACA5B
SPACA5
DVL2
COPS3
CBLL1
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
NKTR
NAA35
GPATCH3
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
TMEM88
CYB5D1
ARF3
THAP12
GVQW3
SPAST
MED9
DUS2
DDX28
CARNMT1
CAND1
NOL7
FANCD2
RPS28
NDUFA7
CSDE1
RAB33B
SLC26A8
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
MATR3
RPL17-C18orf32
RPL17
AIP
SRP19
MTHFD1
IPO11
WDR73
NMB
MUC3A
ACAD9
COX18
SF1
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
UHRF2
SPRYD4
SNX25
CFAP97
EIF4A3
ZSCAN22
GAS8
DBNDD1
CLN5
FAM149B1
ECD
FSIP1
APTX
CNP
SEC14L1
PDCD6IP
SH3GL1
CHAF1A
MSRA
CCNI
TMEM101
YIPF3
POLR1C
TBCCD1
DNAJB11
ZBTB21
PGAM1
MMAA
RLF
ETFA
RBM7
C11orf71
EED
WASHC2C
UQCC1
TSPAN10
NPLOC4
FAM135A
NDUFS7
DARS1
POLDIP3
BTF3
PURA
SNRPD1
MYO9B
HAUS8
TATDN3
NSL1
RPL27A
PAXBP1
MAP3K7
EXOSC10
DNTTIP2
MED23
GFPT1
TBK1
IREB2
SLC35A4
APBB3
PPP5C
S100A13
CHTOP
LSG1
SHPRH
PTCD3
POLR1A
NFYC
TAB3
NDUFS3
KBTBD4
ATP6V1C1
STRIP1
CC2D1B
SCGB1C2
SCGB1C1
ZSWIM7
TTC19
DBR1
SNRPC
EIF5
SPTLC1
IBA57
DDX19A
ANGEL2
TTLL9
RSPH3
ZKSCAN2
ATP6V1G1
PAIP2
PSMA2
SRPRB
MMS22L
KIAA1191
ARL10
CLASP1
PPAT
PAICS
RBM15
FAM76A
EID2
METTL25
CCDC59
ARRDC3
GABPB1
CYRIB
DNA2
NDUFA6
KDM6B
PXMP2
SLC39A4
CPSF1
HTR5A
MRPL40
HIRA
CEP295
PPM1G
GTPBP10
GOLM2
TRPM7
HMGB1
RPS6KB2
RPS15
USPL1
DHX37
BRI3BP
CCNL1
UBN2
MDH1B
FASTKD2
ATXN1L
SPC24
TRNAU1AP
SEC62
ERLIN2
SDF4
B3GALT6
ITGB3BP
EFCAB7
SLC12A2
KCNAB3
GET4
CNTROB
MAMDC2
SEC61G
MRPS7
MBTPS1
GGA3
PWP1
TIMM13