ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025676 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◣ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PMF1-BGLAP
PMF1
UTP25
PEMT
MTRNR2L2
MSH3
DHFR
MTRNR2L9
MTRNR2L8
NME1
BAX
CCDC86
NME2
MLLT1
TRIM48
TRIAP1
SLC35E2A
ZNF485
NOC4L
DDX51
SLC35E2B
PHF7
BAP1
SNRPD1
FAM98A
COLEC11
UNC45B
SSNA1
ANAPC2
AKAP10
SNX25
CFAP97
RGPD2
RGPD1
MRPL55
DDX42
CCDC47
ZNF296
GEMIN7
P3H4
FKBP10
TBL1XR1
GTF3C4
DDX31
DHX33
TENT4A
NPM1
DRG2
EIF5A
FAF1
SRSF1
CWC25
TMEM248
MARVELD1
PCBP1
LSM12
G6PC3
IARS1
ZFP36L2
UBE2K
CBWD5
CBWD3
MTHFD1L
TET3
CBWD6
YBX2
SNRPE
RAN
HMGA1
DUS2
DDX28
RAD50
CLUAP1
C16orf90
MRPL3
NOC3L
SLC25A10
THOP1
SGTA
RBM42
SELENOO
ZNF639
COPS3
IGF2BP3
KCNQ5
PIGL
NCOR1
EIF3B
MAPKAPK5
CLCN7
EBNA1BP2
CFAP57
PTDSS2
NOP16
HIGD2A
MED9
CAD
ICE2
GCN1
DR1
CENPV
ZC3H3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DIAPH1
LARP1
USP22
DPH5
ABT1
MDN1
SYNCRIP
NCBP2AS2
NCBP2
DUS3L
SPRED1
HNRNPF
ETF1
ZNF804A
FRA10AC1
CNBP
OSGEP
APEX1
UTP4
DERPC
CHTF8
ZSWIM7
TTC19
C16orf91
SNF8
SMYD2
UBFD1
EARS2
ADORA2B
PWP1
GPSM3
PDCD11
ATP5MD
SECISBP2
THNSL1
PSMB6
USP32
MAST2
PLD6
SNX9
MRRF
RRM1
PDS5A
TNRC18
LOC100129484
SLC35E1
ARSG
SLC25A33
MEF2D
MAP2K3
ZBTB44
LRP6
KMT5B
CELSR3
ATL3
EEF2K
POGK
RCC2
PLK3
KLF16
XPO5
POLH
EPRS1
PMS2
AIMP2
PPRC1
SPTLC1
OSGIN1
WDR4
TBRG4
METAP1D
TAF5
GET4
TRAP1
ELP3
RPL10A
PRKAR1B
FNTA
SCAND1
GTF2H3
EIF2B1
COA8
BAG5
CMSS1
NR1D1
RNF166
CTU2
YARS1
S100PBP
DIMT1
CTU1
GPAM
PBRM1
GNL3
LONP1
CATSPERD
GOLIM4
PFAS
CTC1
FOXK1
MSTO1
TOMM34
HAX1
COX10
SAMM50
P2RX2
LRCOL1
HTATSF1
ADPGK
NUMBL
EIF4H
MRPS17
SLCO4A1
RRP1B
HSF2BP
ASAP1
TIMM23B
PARG
NEURL4
GATAD2A
SRRD
HPS4
RALGDS
ELK4
NCOA5
DCP1A
TMEM38A
SMIM7
UTP18
MBTD1
PKN2
PRPF4
CDC26
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
TUBD1
RPS6KB1
FAM220A
KHDRBS1
PAGR1
MVP
VDAC3
ENTPD6
LUC7L2
PRMT2
POLA2
SDHA
CCDC127
APOLD1
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
RANBP3
BNIP3
SAYSD1
NBPF1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
FAM122A
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
CENPBD1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
THAP7
RABIF
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
HNRNPH1
CHMP7
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
FMC1
MYPOP
ZNF12
PRR30
PREB
HNRNPL
TMEM250
NAGK
IFNAR1
MTHFSD
MIS18A
NDEL1
SH3YL1
ACP1
FAM71E1
EMC10
XRCC2
LOC100287896
LIPT2
KDM8
INTS13
FGFR1OP2
SUMF2
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
CBY3
RCBTB2
FAM200B
MAP2K7
PPP1CB
RRP1
YEATS4
NOB1
C1orf74
SOD2
CDC7
PPP2CA
MRPS18C
HELQ
WDR74
PTPN4
MOK
TMED4
SELENOI
ADGRF3
SLX4
MAP2K2
DCAF8
FADD
MRPL45
LOC100289561
MTRNR2L1
NELFCD
TMEM141
CCDC183
RPL36
PTK2
HINT1
LAMP1
CHD1
SAFB2
SAFB
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
USP21
MTCH2
POLR2J3
RBM17
FUT8
NANP
BRICD5
RTL10
GNB1L
DUX4
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
HASPIN
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
MRPL24
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
TRMT61B
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP2
TOR1AIP1
THOC3
CCNQ
DHDDS
GATD3B
GATD3A
SARS1
TMEM139
CASP2
NUP214
ASNSD1
ASDURF
SRRM1
DYNC2I1
INTS7
DTL
CRB1
POM121
ACAT2
BLOC1S4
TAX1BP3
EMC6
GH1
FBXO31
CAPZA2
TMEM209
SSMEM1
GDF5
CEP250
UNG
ALKBH2
PARK7
PBLD
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
RAD23A
AP3B1
NAPG
GRB2
MRS2
C6orf136
TASOR2
TBC1D5
LRFN3
FBRS
SPDL1
RNF149
PDXDC1
MAP1LC3B
WDR13
IPMK
CISD1
DYRK1B
DENR
ERCC6L2
TMEM70
ELOC
TIGD1
HSD17B8
EIF4E2
SHBG
FXR2
CDC34
USP10
SEC22C
STS
PUDP
NDUFA8
MORN5
TBL3
EPS15L1
U2AF2
XPO7
UBE2M
RBAK-RBAKDN
RBAK
CHMP2A
CDC5L
PAPSS1
SCAF11
ZMYM4
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
PRELID3B
SLC39A7
RXRB
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
NUF2
ESRRA
CATSPERZ
WDR18
USO1
TMEM104
NAT9
KIFAP3
SMARCC1
ARPC2
MAGOHB
ZNF664-RFLNA
ZNF664
CCDC92
RPS7
TFB2M
CNST
MPC2
DCAF6
MTG1
CYCS
UROS
BCCIP
ZBTB45
SYS1
GZF1
HBS1L
MYL5
ATP5ME
C5orf24
SLC25A11
RNF167
TMEM63B
MRPL14
STYXL1
MDH2
JOSD2
ASPDH
HAUS5
TMEM43
CHCHD4
MORF4L1
C15orf40
DFFB
CEP104
SRCAP
LOC730183
DSN1
TIGD6
HMGXB3
C6orf89
KCNN1
RBM39
EID1
CCDC93
MKNK2
MINK1
WDR43
TMEM63A
MRM3
GLOD4
RPL8
MAPKAP1
NUDCD2
HMMR
PPP2R3B
POP7
PUM2
MRNIP
GID8
DIDO1
POLR2J2
ALG8
AURKAIP1
GOLGA1
DLGAP4
NBPF3
TOPORS
SMIM27
CCDC200
FIP1L1
FRG2C
SKA3
MRPL57
NOP14
GRK4
STXBP4
COX11
POLR2J
MRPL21
IGHMBP2
PUF60
PARP6
AHCTF1
MARCHF7
TMX1
TIA1
MAP3K7CL
CCT8
ING1
CIAO3
PRDM4
PIAS4
AASDH
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
ZZZ3
PTBP1
LANCL2
PHF23
TIPIN
COPB2
ZNF286A
GPBP1
PCGF1
LBX2
PRKDC
MCM4
PPP4R3B
ZBTB2
RPL12
LRSAM1
BTBD10
MBD1
CCNC
ZNF248
TTC32
RFX1
PFKFB4
UPF1
C8orf37
NUP153
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
XPC
LSM3
WWOX
WWP1
RPS29
WRNIP1
MAK16
PGRMC2
AMACR
CBARP
ATP5F1D
CNOT4
ANO10
ABHD5
RPS19
SF3A3
LTV1
KIF22
RPS11
NAPB
RPRD2
TUBGCP5
CAPN7
MAD1L1
PSMB2
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
LPXN
COL23A1
NAT10
MLX
COASY
POFUT2
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
SMG5
NFXL1
CDK12
EIF2S2
DHX9
RPS6
PSMD5
SRRT
NRF1
AP2B1
ZNF34
RAD23B
UBE2D3
SLC15A4
C11orf80
FZR1
SEH1L
CENPS-CORT
CENPS
SBNO1
SRSF11
INO80C
UBR3
METTL5
ARF4
ZNF692
VMAC
NDUFA11
SNX5
MGME1
IQCC
CCDC28B
NOL11
ABHD10
SCAMP5
STX16
DNMT1
METTL22
PRPF39
XKR7
NCOA4
STX1A
COQ9
CIAPIN1
TMEM79
UIMC1
RBBP5
KAZALD1
EHD1
SUPT5H
SPG7
HSPA4
TMX3
CCDC102B
ZC3H14
EIF2S1
ATP6V1D
POLRMT
CEP350
ERGIC2
GPAA1
EXOSC4
VPS13C
ANKFY1
ECHS1
DCDC2B
VMP1
PTRH2
QRICH1
SPEN
NAA38
SLC30A5
CCSER2
NUP62
IL4I1
ATF5
DLD
SMG7
TMED3
YIPF2
TIMM29
ZNF473
VRK3
SREBF1
CD320
GABARAP
PPA1
UQCR11
KCTD13
ASXL1
RNF151
ELP6
ZNF182
SPACA5B
SPACA5
DVL2
TMEM109
ZNF329
CBLL1
HEXIM1
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
PCIF1
ZNF652
NKTR
NAA35
GPATCH3
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
TMEM88
CYB5D1
PAPOLA
CLIP4
ARF3
KATNIP
GTF3C1
THAP12
GVQW3
TRAM1
TMEM120B
SPAST
CARNMT1
CAND1
PGP
NOL7
FANCD2
RPS28
NDUFA7
CSDE1
RAB33B
SLC26A8
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
SPECC1L
TAOK2
MATR3
RPL17-C18orf32
RPL17
AIP
DHX34
SRP19
MTHFD1
IPO11
WDR73
NMB
PLEKHA8
FKBP14
MUC3A
ACAD9
COX18
SF1
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
APC
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
ERCC6
UHRF2
SPRYD4
RFXANK
BORCS8-MEF2B
BORCS8
EIF4A3
ZSCAN22
GAS8
DBNDD1
GOPC
CLN5
FAM149B1
ECD
ARMC2
FSIP1
COX6A1
APTX
CNP
SEC14L1
PDCD6IP
SH3GL1
CHAF1A
MSRA
CCNI
TMEM101
LIG4
ABHD13
UGGT2
YIPF3
POLR1C
TBCCD1
DNAJB11
ZBTB21
PGAM1
LRPAP1
TERF2IP
KARS1
MMAA
RLF
ETFA
RBM7
C11orf71
MARS2
LAGE3
EED
WASHC2C
UQCC1
TSPAN10
NPLOC4
CEP20
FAM135A
NDUFS7
DARS1
POLDIP3
BTF3
ZNF526
SCML1
PURA
MYO9B
HAUS8
TATDN3
NSL1
RPL27A
MPHOSPH6
PAXBP1
MAP3K7
EXOSC10
ZMYM1
DNTTIP2
MED23
GFPT1
TBK1
IREB2
SLC35A4
APBB3
CIPC
PPP5C
S100A13
CHTOP
LSG1
SHPRH
PTTG1IP
PTCD3
POLR1A
NFYC
TAB3
NDUFS3