ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025671 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◣ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

PMF1-BGLAP
PMF1
NOC4L
DDX51
UNC45B
AASDH
GPAM
RBM42
MRPL55
NUP153
SLC35E2A
SLC35E2B
MTRNR2L8
PHF7
BAP1
MTRNR2L9
TBL3
MTRNR2L2
MSH3
DHFR
SSNA1
ANAPC2
CCDC86
MED9
DRG2
FAM149B1
ECD
UTP25
LSG1
ADPGK
ATXN1L
MAGOHB
LANCL2
TRIM48
SSU72
TRIAP1
RLF
SRRD
HPS4
MRM3
GLOD4
RBM23
FAF1
PIGL
NCOR1
DNAJC19
AP2B1
RPS7
LEO1
ERCC6L2
CWC25
RPS8
NDUFA10
HAUS5
SPTLC1
RANBP2
RPL9
LIAS
MAPKAPK5
NOP9
DHRS1
PPIL4
PDE4A
FANCD2
WASHC2C
ADAR
RPS6KB2
RRM1
WDR74
PEMT
RPL12
LRSAM1
ZBTB21
ZSWIM7
TTC19
EPRS1
NUP214
DENR
PEF1
PSMB6
VPS37B
C1D
STK19
DXO
NME1
ZMAT2
ABT1
HEXA
COPS8
FAM228B
SF3B6
ZNHIT6
UBR1
MFN2
METTL25
CCDC59
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
TUBD1
RPS6KB1
FAM220A
KHDRBS1
PAGR1
MVP
VDAC3
ENTPD6
LUC7L2
PRMT2
POLA2
SDHA
CCDC127
APOLD1
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
NBPF1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
FAM122A
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
CENPBD1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
THAP7
RABIF
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
HNRNPH1
CHMP7
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
FMC1
MYPOP
ZNF12
PRR30
PREB
HNRNPL
TMEM250
NAGK
IFNAR1
MTHFSD
MIS18A
NDEL1
SH3YL1
ACP1
FAM71E1
EMC10
XRCC2
LOC100287896
LIPT2
KDM8
INTS13
FGFR1OP2
SUMF2
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
CBY3
RCBTB2
FAM200B
MAP2K7
PPP1CB
RRP1
YEATS4
NOB1
C1orf74
SOD2
CDC7
PPP2CA
MRPS18C
HELQ
PTPN4
MOK
TMED4
SELENOI
ADGRF3
SLX4
MAP2K2
DCAF8
FADD
MRPL45
LOC100289561
MTRNR2L1
NELFCD
TMEM141
CCDC183
RPL36
PTK2
HINT1
WDR4
LAMP1
CHD1
SAFB
SAFB2
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
USP21
NPM1
MTCH2
POLR2J3
RBM17
FUT8
NANP
BRICD5
RTL10
GNB1L
DUX4
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
THOP1
SGTA
HASPIN
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
MRPL24
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
TRMT61B
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP2
TOR1AIP1
THOC3
CCNQ
DHDDS
GATD3B
GATD3A
SARS1
TMEM139
CASP2
ASNSD1
ASDURF
SRRM1
DYNC2I1
INTS7
DTL
CRB1
POM121
ACAT2
BLOC1S4
TAX1BP3
EMC6
GH1
FBXO31
CAPZA2
TMEM209
SSMEM1
GDF5
CEP250
UNG
ALKBH2
PARK7
PBLD
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
RAD23A
AP3B1
NAPG
GRB2
MRS2
C6orf136
TASOR2
TBC1D5
LRFN3
FBRS
SPDL1
RNF149
PDXDC1
MAP1LC3B
WDR13
IPMK
CISD1
DYRK1B
TMEM70
ELOC
TIGD1
HSD17B8
EIF4E2
SHBG
FXR2
CDC34
USP10
SEC22C
STS
PUDP
NDUFA8
MORN5
EPS15L1
U2AF2
XPO7
UBE2M
RBAK-RBAKDN
RBAK
CHMP2A
CDC5L
PAPSS1
SCAF11
ZMYM4
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
PRELID3B
SLC39A7
RXRB
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
EIF5A
NUF2
ESRRA
CATSPERZ
WDR18
USO1
TMEM104
NAT9
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
TFB2M
CNST
MPC2
DCAF6
MTG1
CYCS
UROS
BCCIP
ZBTB45
SYS1
GZF1
HBS1L
MYL5
ATP5ME
C5orf24
SLC25A11
RNF167
TMEM63B
MRPL14
STYXL1
MDH2
JOSD2
ASPDH
TMEM43
CHCHD4
UTP18
MBTD1
MORF4L1
C15orf40
DFFB
CEP104
SRCAP
LOC730183
CBWD5
DSN1
TIGD6
HMGXB3
C6orf89
KCNN1
RBM39
EID1
CCDC93
SCAND1
MKNK2
MINK1
WDR43
TENT4A
TMEM63A
RPL8
MAPKAP1
NUDCD2
HMMR
PPP2R3B
CBWD3
POP7
PUM2
MRNIP
GID8
DIDO1
POLR2J2
CELSR3
ALG8
AURKAIP1
GOLGA1
DLGAP4
GTF2H3
EIF2B1
NBPF3
TOPORS
SMIM27
NR1D1
CCDC200
FIP1L1
FRG2C
SKA3
MRPL57
NOP14
GRK4
STXBP4
RPL10A
COX11
POLR2J
MRPL21
IGHMBP2
PUF60
PARP6
AHCTF1
MARCHF7
CBWD6
TMX1
TIA1
MAP3K7CL
CCT8
ING1
CIAO3
PRDM4
PIAS4
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
ZZZ3
PTBP1
PHF23
TIPIN
COPB2
ZNF286A
GPBP1
PCGF1
LBX2
PRKDC
MCM4
PPP4R3B
ZBTB2
BTBD10
MBD1
CCNC
ZNF248
TTC32
RFX1
PFKFB4
UPF1
C8orf37
DCP1A
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
XPC
LSM3
WWOX
WWP1
RPS29
WRNIP1
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
CBARP
ATP5F1D
CNOT4
ANO10
ABHD5
RPS19
SF3A3
LTV1
KIF22
RPS11
NAPB
RPRD2
TUBGCP5
CAPN7
MAD1L1
PSMB2
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
LPXN
COL23A1
NAT10
MLX
COASY
POFUT2
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
SMG5
PCBP1
NFXL1
CDK12
EIF2S2
DHX9
RPS6
PSMD5
SRRT
NRF1
ZNF34
RAD23B
UBE2D3
SLC15A4
C11orf80
FZR1
SEH1L
CENPS-CORT
CENPS
SBNO1
SRSF11
INO80C
UBR3
METTL5
ARF4
ZNF692
VMAC
NDUFA11
SNX5
MGME1
IQCC
CCDC28B
NOL11
ABHD10
SCAMP5
STX16
DNMT1
METTL22
PRPF39
XKR7
NCOA4
STX1A
COQ9
CIAPIN1
TMEM79
UIMC1
RBBP5
KAZALD1
EHD1
SUPT5H
SPG7
LSM12
G6PC3
HSPA4
ZNF296
GEMIN7
TMX3
CCDC102B
ZC3H14
EIF2S1
ATP6V1D
POLRMT
CEP350
ERGIC2
GPAA1
EXOSC4
VPS13C
ANKFY1
ECHS1
DCDC2B
VMP1
PTRH2
QRICH1
SPEN
NAA38
SLC30A5
CCSER2
NUP62
IL4I1
ATF5
DLD
SMG7
TMED3
YIPF2
TIMM29
ZNF473
VRK3
SREBF1
CD320
GABARAP
PPA1
UQCR11
KCTD13
ASXL1
MRRF
RNF151
ELP6
ZNF182
SPACA5B
SPACA5
DVL2
TMEM109
ZNF329
COPS3
CBLL1
HEXIM1
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
PCIF1
ZNF652
NKTR
NAA35
GPATCH3
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
TMEM88
CYB5D1
PAPOLA
CLIP4
ARF3
KATNIP
GTF3C1
THAP12
GVQW3
TRAM1
TMEM120B
SPAST
DUS2
DDX28
CARNMT1
CAND1
PGP
NOL7
RPS28
NDUFA7
CSDE1
RAB33B
SLC26A8
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
SPECC1L
TAOK2
MATR3
RPL17-C18orf32
RPL17
AIP
DHX34
SRP19
MTHFD1
IPO11
WDR73
NMB
PLEKHA8
FKBP14
MUC3A
ACAD9
COX18
SF1
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
APC
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
ERCC6
UHRF2
SPRYD4
RFXANK
BORCS8-MEF2B
BORCS8
SNX25
CFAP97
EIF4A3
ZSCAN22
GAS8
DBNDD1
GOPC
CLN5
ARMC2
FSIP1
COX6A1
APTX
CNP
SEC14L1
PDCD6IP
SH3GL1
CHAF1A
MSRA
CCNI
TMEM101
LIG4
ABHD13
UGGT2
YIPF3
POLR1C
TBCCD1
DNAJB11
PGAM1
LRPAP1
TERF2IP
KARS1
MMAA
ETFA
RBM7
C11orf71
MARS2
LAGE3
EED
UQCC1
TSPAN10
NPLOC4
CEP20
FAM135A
NDUFS7
DARS1
POLDIP3
BTF3
ZNF526
SCML1
PURA
SNRPD1
MYO9B
HAUS8
TATDN3
NSL1
RPL27A
MPHOSPH6
PAXBP1
MAP3K7
EXOSC10
ZMYM1
DNTTIP2
MED23
RGPD2
RGPD1
GFPT1
TBK1
IREB2
SLC35A4
APBB3
CIPC
PPP5C
S100A13
CHTOP
SHPRH
PTTG1IP
PTCD3
POLR1A
NFYC
TAB3
NDUFS3
KBTBD4
ATP6V1C1
STRIP1
SELENOT
MBD3
CC2D1B
SCGB1C2
SCGB1C1
DBR1
VARS2
FAM227A
CBY1
SNRPC
EIF5
IBA57
DDX19A
ANGEL2
TTLL9
RSPH3
ZKSCAN2
ATP6V1G1
PAIP2
PSMA2
SRPRB
MMS22L
KIAA1191
ARL10
CLASP1
PPAT
PAICS
RBM15
FAM76A
EID2
ARRDC3
GABPB1
CYRIB
DNA2
GAA
NDUFA6
KDM6B
PXMP2
SLC39A4
CPSF1
HTR5A
UPF2
MRPL40
HIRA
CEP295
PPM1G
GTPBP10
GOLM2
ZNF747
TRPM7
HMGB1
RPS15
USPL1
DHX37
BRI3BP
CCNL1
FKBP1A
CCDC150
UBN2
MDH1B
FASTKD2
ALAS1
SPC24
TRNAU1AP
SEC62
RBBP7
ERLIN2
SDF4
PUSL1
B3GALT6
ACAP3
ITGB3BP
EFCAB7
SLC12A2
KCNAB3
GET4
CNTROB
MAMDC2
SEC61G
MRPS7
MBTPS1
GGA3
PWP1
TIMM13
TRIM46
KRTCAP2
PMS1
ORMDL1
GPATCH8
TTC37
TMED9
ARSK
ZHX3
RCC1
INTS12
GSTCD
IPO4
SMARCD2
SPEGNB
GMPPA
DDX42
CCDC47
C16orf91
TMEM127
CIAO1
DNAJB12
RAPGEF6
AARSD1
MED4
MEAF6
DNAJC25-GNG10
DNAJC25
CFAP70
PVR
ARF1
RPP14
HTD2
MLH3
SUGP1
MAU2
HNRNPU
MAP4K1
EIF3K
CCDC77
SPATS2
SPDYE14
SPDYE10P