ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5025674 | SH-EP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◣ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

UNC45B
PMF1-BGLAP
PMF1
GPAM
SLC35E2A
SLC35E2B
NOC4L
DDX51
SSNA1
ANAPC2
MRPL55
MTRNR2L2
MSH3
DHFR
MED9
CWC25
RBM42
DRG2
NUP153
MTRNR2L8
ADPGK
SIRT4
PSMB2
LSG1
FAM149B1
ECD
AP2B1
LANCL2
MRM3
GLOD4
TMEM107
MAGOHB
NOP9
DHRS1
TRMT61B
TBL3
CCDC86
PHF7
BAP1
SRRD
HPS4
MRPL2
KLC4
WDR74
MTRNR2L9
AASDH
UTP25
TRIAP1
FAF1
SPTLC1
SMG8
ERCC6L2
DNAJC19
FAM228B
SF3B6
PDCD7
ATXN1L
BDP1
RPL9
LIAS
RMDN3
FBXO34
LMBR1
NME1
RPS6KB2
TRIM48
GTF2H3
EIF2B1
TBRG4
DCAF8
COA8
BAG5
PTOV1
DPH5
PSMB6
PEX10
JOSD2
ASPDH
NCOA5
PTPN6
C12orf57
RANBP2
RBBP5
RRM1
STXBP4
COX11
METTL25
CCDC59
MTF2
RRNAD1
ISG20L2
BRAF
WASHC5
NSMCE2
ZSWIM7
TTC19
EPRS1
RPLP0
HAUS5
DHX40
COMMD1
CCT4
WFDC3
DNTTIP1
ELP3
DUX4
SSU72
NUDT9
KPNB1
ZNF330
RLF
TUBGCP6
TARS2
RPS7
EGR1
NDUFA10
CENPE
TRIM7
CCAR2
C8orf58
PMVK
ANAPC5
ANKRD40
SMAD7
IPO4
FAM98B
TCF4
PKN2
NDUFS7
TMEM259
CNN2
RALGAPA1
FANCD2
ZDHHC3
EXOSC7
ZNHIT6
HES1
TRMT5
SLC38A6
UBB
H4C11
FAM122A
TTI2
DNAJB4
NUF2
NCAPH2
LMF2
INTS12
GSTCD
ABT1
RPS8
FOXJ3
RAVER1
POLR1F
FLCN
H4C12
MIA3
ZNF547
TRAPPC2B
ZC3HC1
LEO1
NUP214
SHF
VPS37B
MRPL44
WASL
SAMD11
C8orf33
ARL6IP1
DLAT
ZNF165
MAN2C1
NBEAL1
GGCX
PEMT
CRLS1
SMG5
TMEM79
DENR
SPRTN
EXOC8
N6AMT1
ANKRD26
PHF12
DNAJA3
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
TUBD1
RPS6KB1
FAM220A
KHDRBS1
PAGR1
MVP
VDAC3
ENTPD6
LUC7L2
PRMT2
POLA2
SDHA
CCDC127
APOLD1
CXorf38
RAD21
SMIM11B
SMIM11A
SRSF10
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
NBPF1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
PDRG1
BANP
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
CENPBD1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
THAP7
RABIF
NPRL3
MAN1B1
FAM24B
ABCA3
RPP38
HNRNPH1
CHMP7
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
FMC1
MYPOP
ZNF12
PRR30
PREB
HNRNPL
TMEM250
NAGK
IFNAR1
MTHFSD
MIS18A
NDEL1
SH3YL1
ACP1
FAM71E1
EMC10
XRCC2
LOC100287896
LIPT2
KDM8
INTS13
FGFR1OP2
SUMF2
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
CBY3
RCBTB2
FAM200B
MAP2K7
PPP1CB
RRP1
YEATS4
NOB1
C1orf74
SOD2
CDC7
PPP2CA
MRPS18C
HELQ
PTPN4
MOK
TMED4
SELENOI
ADGRF3
SLX4
MAP2K2
FADD
MRPL45
LOC100289561
MTRNR2L1
NELFCD
TMEM141
CCDC183
RPL36
PTK2
HINT1
WDR4
LAMP1
CHD1
SAFB
SAFB2
OARD1
NFYA
OPA1
ZNF576
IRGQ
TRIM37
SRSF1
USP21
NPM1
MTCH2
POLR2J3
RBM17
FUT8
NANP
BRICD5
RTL10
GNB1L
CACYBP
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
THOP1
SGTA
HASPIN
OSCAR
NDUFA3
MSL2
HP1BP3
NPAS4
MRPL24
RALGAPB
TOMM20
GMCL1
TDP2
ACOT13
NUP50
SPOP
SNRNP70
THAP5
DNAJB9
EEF1AKMT1
CCT5
ATPSCKMT
DPF2
AKAP1
TOR1AIP2
TOR1AIP1
THOC3
CCNQ
DHDDS
GATD3B
GATD3A
SARS1
TMEM139
CASP2
ASNSD1
ASDURF
SRRM1
DYNC2I1
INTS7
DTL
CRB1
POM121
ACAT2
BLOC1S4
TAX1BP3
EMC6
GH1
FBXO31
CAPZA2
TMEM209
SSMEM1
GDF5
CEP250
UNG
ALKBH2
PARK7
PBLD
HNRNPH3
PPME1
C2CD3
ARFGAP3
COP1
SMIM14
RAD23A
AP3B1
NAPG
GRB2
MRS2
C6orf136
TASOR2
TBC1D5
LRFN3
FBRS
SPDL1
RNF149
PDXDC1
MAP1LC3B
WDR13
IPMK
CISD1
DYRK1B
TMEM70
ELOC
TIGD1
HSD17B8
EIF4E2
SHBG
FXR2
CDC34
USP10
SEC22C
STS
PUDP
NDUFA8
MORN5
EPS15L1
U2AF2
XPO7
UBE2M
RBAK-RBAKDN
RBAK
CHMP2A
CDC5L
PAPSS1
SCAF11
ZMYM4
PALB2
DCTN5
HSF1
BOP1
C8orf48
RSL1D1
HINFP
PRELID3B
SLC39A7
RXRB
CC2D1A
C19orf57
SRD5A1
NSUN2
ZNF638
EIF5A
ESRRA
CATSPERZ
WDR18
USO1
TMEM104
NAT9
KIFAP3
SMARCC1
ARPC2
ZNF664-RFLNA
ZNF664
CCDC92
TFB2M
CNST
MPC2
DCAF6
MTG1
CYCS
UROS
BCCIP
ZBTB45
SYS1
GZF1
HBS1L
MYL5
ATP5ME
C5orf24
SLC25A11
RNF167
TMEM63B
MRPL14
STYXL1
MDH2
TMEM43
CHCHD4
UTP18
MBTD1
MORF4L1
C15orf40
DFFB
CEP104
SRCAP
LOC730183
CBWD5
DSN1
TIGD6
HMGXB3
C6orf89
KCNN1
RBM39
EID1
CCDC93
SCAND1
MKNK2
MINK1
WDR43
TENT4A
TMEM63A
RPL8
MAPKAP1
NUDCD2
HMMR
PPP2R3B
CBWD3
POP7
PUM2
MRNIP
GID8
DIDO1
POLR2J2
CELSR3
ALG8
AURKAIP1
GOLGA1
DLGAP4
NBPF3
TOPORS
SMIM27
NR1D1
MAPKAPK5
CCDC200
FIP1L1
FRG2C
SKA3
MRPL57
NOP14
GRK4
RPL10A
POLR2J
MRPL21
IGHMBP2
PUF60
PARP6
AHCTF1
MARCHF7
CBWD6
TMX1
TIA1
MAP3K7CL
CCT8
ING1
CIAO3
PRDM4
PIAS4
KDM3A
TSEN2
ENDOV
TMEM18
CPLANE2
RNF130
CFAP410
LINS1
ASB7
ZZZ3
PTBP1
PHF23
TIPIN
COPB2
ZNF286A
GPBP1
PCGF1
LBX2
PRKDC
MCM4
PPP4R3B
ZBTB2
RPL12
LRSAM1
BTBD10
MBD1
CCNC
ZNF248
TTC32
RFX1
PFKFB4
UPF1
C8orf37
DCP1A
CLPTM1L
B9D1
E2F6
RNF32
ZBTB14
TAOK1
XPC
LSM3
WWOX
WWP1
RPS29
WRNIP1
NOP16
MAK16
HIGD2A
PGRMC2
AMACR
CBARP
ATP5F1D
CNOT4
ANO10
ABHD5
RPS19
SF3A3
LTV1
KIF22
RPS11
NAPB
RPRD2
TUBGCP5
CAPN7
MAD1L1
TSACC
CCT3
ATP5MC2
ARHGAP35
TSSC4
SIRT5
ZFP91
TMCO1
LPXN
COL23A1
NAT10
MLX
COASY
POFUT2
TAS1R1
NOL9
C1orf53
ATAD3A
PRDX1
ATP5PO
PCBP1
NFXL1
CDK12
EIF2S2
DHX9
RPS6
PSMD5
SRRT
NRF1
ZNF34
RAD23B
UBE2D3
SLC15A4
C11orf80
FZR1
SEH1L
CENPS-CORT
CENPS
SBNO1
SRSF11
INO80C
UBR3
METTL5
ARF4
ZNF692
VMAC
NDUFA11
SNX5
MGME1
IQCC
CCDC28B
NOL11
ABHD10
SCAMP5
STX16
DNMT1
METTL22
PRPF39
XKR7
NCOA4
STX1A
COQ9
CIAPIN1
UIMC1
KAZALD1
EHD1
SUPT5H
SPG7
LSM12
G6PC3
HSPA4
ZNF296
GEMIN7
TMX3
CCDC102B
ZC3H14
EIF2S1
ATP6V1D
POLRMT
CEP350
ERGIC2
GPAA1
EXOSC4
VPS13C
ANKFY1
ECHS1
DCDC2B
VMP1
PTRH2
QRICH1
SPEN
NAA38
SLC30A5
CCSER2
NUP62
IL4I1
ATF5
DLD
SMG7
TMED3
YIPF2
TIMM29
ZNF473
VRK3
SREBF1
CD320
GABARAP
PPA1
UQCR11
KCTD13
ASXL1
MRRF
RNF151
ELP6
ZNF182
SPACA5B
SPACA5
DVL2
TMEM109
ZNF329
COPS3
CBLL1
HEXIM1
IQSEC3
PIGF
CRIPT
TIGD5
EEF1D
SNRPB2
PCIF1
ZNF652
NKTR
NAA35
GPATCH3
AKAP11
ICMT
CSNK1A1
MOCS2
DNAJC27
DMAP1
TMEM88
CYB5D1
PAPOLA
CLIP4
ARF3
KATNIP
GTF3C1
THAP12
GVQW3
TRAM1
TMEM120B
SPAST
DUS2
DDX28
CARNMT1
CAND1
PGP
NOL7
RPS28
NDUFA7
CSDE1
RAB33B
SLC26A8
MRTFB
MAPK14
FITM2
EIF1AD
BANF1
RFC5
SPECC1L
TAOK2
MATR3
RPL17-C18orf32
RPL17
AIP
DHX34
SRP19
MTHFD1
IPO11
WDR73
NMB
PLEKHA8
FKBP14
MUC3A
ACAD9
COX18
SF1
ATF2
ASCC1
ANAPC16
TRAPPC2
OFD1
APC
PDCL3
ZDHHC12
THADA
SMIM10L1
PRH1-TAS2R14
PRH1
BRD2
ERCC6
UHRF2
SPRYD4
RFXANK
BORCS8-MEF2B
BORCS8
SNX25
CFAP97
EIF4A3
ZSCAN22
GAS8
DBNDD1
GOPC
CLN5
ARMC2
FSIP1
COX6A1
APTX
CNP
SEC14L1
PDCD6IP
SH3GL1
CHAF1A
MSRA
CCNI
TMEM101
LIG4
ABHD13
UGGT2
YIPF3
POLR1C
TBCCD1
DNAJB11
ZBTB21
PGAM1
LRPAP1
TERF2IP
KARS1
MMAA
ETFA
RBM7
C11orf71
MARS2
LAGE3
EED
WASHC2C
UQCC1
TSPAN10
NPLOC4
CEP20
FAM135A
DARS1
POLDIP3
BTF3
ZNF526
SCML1
PURA
SNRPD1
MYO9B
HAUS8
TATDN3
NSL1
RPL27A
MPHOSPH6
PAXBP1
MAP3K7
EXOSC10
ZMYM1
DNTTIP2
MED23
RGPD2
RGPD1
GFPT1
TBK1
IREB2
SLC35A4
APBB3
CIPC
PPP5C
S100A13
CHTOP
SHPRH
PTTG1IP
PTCD3
POLR1A
NFYC
TAB3
NDUFS3
KBTBD4
ATP6V1C1
STRIP1
SELENOT
MBD3
CC2D1B
SCGB1C2
SCGB1C1
DBR1
VARS2
FAM227A
CBY1
SNRPC
EIF5
IBA57
DDX19A
ANGEL2
TTLL9
RSPH3
ZKSCAN2
ATP6V1G1
PAIP2
PSMA2
SRPRB
MMS22L
KIAA1191
ARL10
CLASP1
PPAT
PAICS
RBM15
FAM76A
EID2
ARRDC3
GABPB1
CYRIB
DNA2
GAA
NDUFA6
KDM6B
PXMP2
SLC39A4
CPSF1
HTR5A
UPF2
MRPL40
HIRA
CEP295
PPM1G
GTPBP10
GOLM2
ZNF747
TRPM7
HMGB1
RPS15
USPL1
DHX37
BRI3BP