ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150457 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◣ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX10476669: Hep G2

◢ SRX10476670: Hep G2

◢ SRX150688: Hep G2

◢ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX10478135: K-562

◢ SRX10478136: K-562

◢ SRX3322030: K-562

◢ SRX3322031: K-562

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

ECHS1
FAM200B
NAA35
QRICH1
ATF2
TMEM209
SSMEM1
COQ9
CIAPIN1
MAP2K2
STXBP4
COX11
PTPN4
PUF60
PBLD
HNRNPH3
SH3GL1
CHAF1A
MAP10
VDAC3
MARCHF7
SKA3
MRPL57
ZZZ3
DENR
NOP14
GRK4
SLC26A8
MAPK14
RPL12
LRSAM1
SMIM10L1
PRH1-TAS2R14
PRH1
BTBD10
ERCC6L2
SLC25A11
RNF167
UHRF2
TIPIN
RPL17-C18orf32
RPL17
ERGIC2
AKAP11
MLX
COASY
XPC
LSM3
TTC23
LRRC28
SUPT5H
RPS9
TAS1R1
NOL9
PRDX1
TRAPPC2
OFD1
TUBGCP5
PXMP2
POLE
CDK12
CAND1
FSIP1
EIF5
CDC5L
LUC7L2
PSMD5
RPS19
TMEM18
ANKFY1
RFC5
FAM135A
LAMP1
RPL10A
RBM15
ARF3
ETFA
MAD1L1
MDH1B
FASTKD2
COPB2
RPS6
IREB2
CTXN2
MYEF2
RPS11
WDR27
C6orf120
RBM39
NCOA4
NAA38
TMEM88
CYB5D1
PPP4R3B
PURA
CFAP70
EFHC1
CEP350
WDR73
NMB
ASXL1
DNAJC27
BANP
TAOK1
SLC15A4
HERC1
TMCO1
SMG5
TMEM79
KAZALD1
RNPC3
GOLM2
STYXL1
MDH2
DBR1
MICOS10-NBL1
MICOS10
ZFP91
LPXN
CUL3
GAS8
DBNDD1
MAK16
STRIP1
SEPTIN7
RPL27A
SLC25A4
DARS1
MMS22L
NOL11
RPS28
NDUFA7
WDR74
SUGP1
MAU2
TAB3
SRCAP
LOC730183
HSPA4
YOD1
PFKFB2
MATR3
JOSD2
ASPDH
RPL7A
MED22
UBR3
METTL5
MAP3K7CL
CCT8
SEC22C
NKTR
KIAA1191
ARL10
CCNC
RC3H2
UBE2D3
SEC62
NANP
RAB33B
TMEM245
MRPS7
GGA3
SRP19
RBPJ
CNP
CD2AP
SCAMP5
GLCE
KIF5A
DCTN2
SLC12A2
AKAP1
ZCCHC14
SPAG16
NSUN3
DHFR2
SPDL1
PAXBP1
USP54
POLDIP3
SPEGNB
GMPPA
EHD1
ZNF346
GPATCH3
MAMDC2
LIN7C
SNX5
MGME1
HSBP1
MPC2
DCAF6
C6orf89
LTV1
KIN
ATP5F1C
GRWD1
ZBTB2
MED1
MICU2
SIPA1L1
PIGN
EIF4A3
HASPIN
CHUK
HSPH1
DHX37
BRI3BP
ATF7-NPFF
ATF7
MBTPS1
CDC20
TADA3
ARPC4-TTLL3
ARPC4
SRSF10
WDR77
ATP5PB
HSD17B8
SLC39A7
RXRB
MAGT1
COX7B
ZNF850
ZNF219
TMEM253
AHCTF1
FAM76A
ZYG11A
SHPRH
C1orf74
NFYC
ZKSCAN2
ZFC3H1
THAP2
MFSD8
ABHD18
ADAT1
SMARCA5
SMC4
IFT80
INTS13
FGFR1OP2
ATF4
GPBP1
DDHD2
PDRG1
IKZF5
ACADSB
MTRNR2L1
RBM26
CCNJ
CCNT1
WDR6
C5orf24
SMNDC1
ZNF582
MTRNR2L2
MSH3
DHFR
YY1
SPRTN
EXOC8
THAP1
ICMT
RCC1
ZNF414
ZMYM3
TRIM37
POP7
SEC63
UBALD1
RPS15
TGOLN2
GDI2
VMAC
NDUFA11
INKA2
DDX20
DNAJB4
IFRD1
FUBP1
AURKAIP1
MTRNR2L8
NKRF
ZNF317
GORASP2
RPS7
RICTOR
NPTN
FOXO3B
ASH2L
HUWE1
ABCC10
AGA
MAP3K7
ANKRD13C
IMP3
SF1
PPM1G
ERICH6
NFATC3
ATAD3A
CSDE1
SSR4
IDH3G
SAXO1
RRAGA
ZNF136
MRTFB
CNPY2
RPS15A
SLC35B4
MAGOHB
TRIM48
DGUOK
ZNF286A
THADA
MUC3A
POLR2B
NOA1
POLR2E
DSE
TSPYL1
CHURC1-FNTB
CHURC1
TTLL9
SRRT
BZW1
ETF1
HAUS5
KPNA2
ADNP
SNX16
C1orf198
CLPTM1
ACTRT3
FZD6
MTMR8
PHF12
SMARCD2
PIH1D1
ALDH16A1
SLC39A9
ERH
ZFP30
PIGW
MYO19
PMF1-BGLAP
PMF1
PDPR
SUV39H1
CCDC77
MTFR1L
AGL
RGPD2
RGPD1
AGBL3
ABI1
LSM14A
RNF151
RPS2
RPL26
PTPN1
IFT46
CENPC
EDRF1
SETD5
PCMTD1
DNAJA3
USP39
C2orf68
NPRL3
GRB2
TOPORS
SMIM27
MRPS18C
HELQ
RMI1
HNRNPK
SENP7
CBWD5
CUL5
TAF1D
C11orf54
SLU7
PTTG1
CLP1
EXOSC10
METTL16
CBWD3
CBWD6
EIF4A2
C22orf34
YIPF3
POLR1C
TMEM183A
FLNA
EMD
TARDBP
SIRT5
MRPL12
HERPUD2
DNTTIP2
RFC3
SMG7
BCAS3
ASNSD1
ASDURF
EMILIN2
USP47
CDC25B
CENPB
GPR19
RPP38
SLC35E2A
NOP16
HIGD2A
ZNF566
CYB561D1
GID8
DIDO1
VMP1
PTRH2
ZNF614
FAM50B
SLC25A26
MOB1A
PACS2
BRF1
GGH
GGNBP2
PDS5A
SUGT1
ZNF420
SMC1A
RIBC1
NSDHL
CETN2
LYRM7
GOLGA8B
SLC25A28
RPS3A
PPP1R12A
UPF3B
ZNF790
ZNF345
UBE2D2
ANAPC4
CCT5
ATPSCKMT
STK38L
TTC32
PPP1R10
MRPS18B
SPATA33
PTGR2
SMDT1
PSENEN
LIN37
CDIN1
BCLAF1
ZNF559-ZNF177
ZNF559
INTS9
HMBOX1
CHST7
TAB2
PPIL3
NIF3L1
KBTBD6
PPP1R42
NMRAL1
HMOX2
DDX19A
DDX3X
C20orf27
OGDH
MTRNR2L9
NRBF2
CREBZF
ERLIN2
MTRF1L
GSTO2
SLC35E2B
NUCKS1
TUT4
FAM122A
TBC1D5
H3C15
H3C14
H2AC19
H2AC18
UBE2H
SAP18
AP2B1
MRPS14
PNN
TRAPPC6B
INO80
RBM4B
PIK3R2
DZIP3
CIP2A
SSH2
ACCS
TMEM127
CIAO1
NUDT2
KIF24
LSM8
RAB1B
FKBPL
ATF6B
CACYBP
RPL23A
RAB34
GRAMD2B
DMXL1
PSMD2
GGA1
EIF3L
ANKRD54
PARPBP
NUP37
FUS
PSMB2
MTRNR2L6
REV3L
UNG
ALKBH2
ZBTB25
ZBTB1
CNNM2
SMARCAL1
NCL
TROAP
DUX4
SETDB2-PHF11
SETDB2
CAB39L
NSRP1
FAM71E1
EMC10
APTX
TFRC
HSPA12A
ENO4
TSPYL4
ZNF512B
ATP9B
NAA60
SVIP
LRFN3
TMEM107
RAMAC
ZWILCH
RPL4
SMC5
HDAC6
MRM3
GLOD4
PDE12
NPM1
BUB1B
CHIC2
PHF5A
ACO2
RSL24D1
WDR44
H3C13
H2BC18
C3orf62
UNC45B
KSR2
ARHGAP35
SNRPC
TMEM11
NGB
RACK1
RPS29
ATP5MC1
FADD
COPS3
SPATC1L
PEX14
DFFA
HDAC10
PPOX
SAR1A
TASOR2
DDX42
CCDC47
TCTN1
HIBCH
SMARCC1
FBN1
SNRNP70
CLEC11A
RAPGEF6
CCNG1
MINK1
MTHFD1
KCNAB3
CNTROB
CCNH
AP4E1
SAMD8
DUSP13
THAP7
IFT74
NUDT19
RALBP1
BCAS1
ACAD9
TRA2A
TCF3
DIS3
SPAAR
RBM42
CAMK2D
PRKDC
MCM4
SLC25A33
FOXK2
GCA
TASL
WASHC4
NBPF12
SLFN12L
CCDC200
MRE11
ANKRD49
WDR59
RPL23
UPF3A
SRSF5
LTA4H
NOC4L
DDX51
SMIM4
NT5DC2
DRG1
ZNF547
TRAPPC2B
UMAD1
QKI
ZNF500
SMC1B
RIBC2
ZNF527
SLC41A3
MX1
H2BC21
H2AC21
H2AC20
PHB
RPGRIP1L
FTO
KIF18B
SREK1
LARS1
VIPAS39
AHSA1
FRG2
AFF4
PGAP2
CLK3
ITGB1BP1
CPSF3
NMD3
SPC25
PRDX4
MYSM1
TLK1
STAG1
ZDHHC5
CAMK2G
METTL25
CCDC59
TEX9
CHST12
RBBP7
CAPN7
ETFDH
C4orf46
NBPF11
CARMIL1
WWOX
COQ2
PEBP1
RPL24
NRL
DCAF11
RAB11B
ZFHX2
THTPA
CCDC86
CD320
KIF15
KIAA1143
USP9X
SEC61A1
GATM
HELLS
GTF2A1
SEC31A
NANS
THAP9
PSMG2
CEP76
POU4F1
WRNIP1
SCAMP4
ADAT3
CHFR
CELF1
PTPMT1
C1RL
RAD23A
CBWD1
VPS37B
LY86
PTGES3
NUDT5
CDC123
PAFAH2
FDPS
CYC1
ACOX3
TRMT44
GNB2
ACTA2
SYNGR2
IPO4
HECA
NOCT
EP400
DPP9
ADSS2
SCAMP3
ZCWPW1
MEPCE
SIVA1
TXNDC9
EIF5B
LRR1
TCERG1
MAFF
MAD2L1
POLG
CWC25
EXO5
MTF2
SSBP4
SBNO1
OXNAD1
DPH3
SRSF4
PEX11B
NOC3L
ZNF302
TTC3
PIGP
TMEM41B
ZNF444
ZDHHC7
EIF2AK2
INAFM1
SSNA1
ANAPC2
MRPL4
SMARCAD1
LARP1B
MAPKAPK5
POLR1H
H4C3
H1-6
ZBTB20
NUP214
WFDC3
DNTTIP1
SUPT16H
ZNF335
DDX56
HBQ1
HBA1
NUDT18
TIA1
ZBTB37
ZNF236
GINS4
PAK1
INTS6
MOB1B
EEF1G
SPTSSA
SLC44A1
LOXL3
DOK1
ZW10
MRRF
PSPH
CCT6A
ZNF155
MLLT6
CETN3
ANXA7
MPP5
PRPF40B
METTL2B
CENPBD1
SEC23B
PRPF4
CDC26
NDUFB6
PLTP
CCDC28A
WARS2
HES4
ILF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TBL3
LANCL2
PPM1D
CLPX
ADNP2
FBXO34
HMGB3
RRP1
AASDH
PPP1R15A
PLEKHA4
TBC1D17
AKT1S1
PDE7A
CITED2
PDE4A
FBXL19
CCNL1
ADCY3
POLR3E
N6AMT1
ANKRD26
RAB35
ADI1
NBEAL2
CCDC12
SUGP2
ARMC6
SMARCA4
XRCC5
STK32C
LRRC27
POU2F1
C10orf88
FAM222B
PRRT2
TUBD1
RPS6KB1
FAM220A
KHDRBS1
PAGR1
MVP
ENTPD6
PRMT2
POLA2
SDHA
CCDC127
APOLD1
CXorf38
RAD21
SMIM11B
SMIM11A
ACTN4
FAM98A
RANBP3
BNIP3
LONP1
CATSPERD
SAYSD1
NBPF1
VPS26B
NCAPD3
SNAP47
JMJD4
ZC3H8
XPO5
POLH
TMEM143
SYNGR4
MCRS1
TOLLIP
ATP6V0E2
ITPA
DDRGK1
SAMHD1
PPP6R1
GTF3A
ZBTB17
ABCF3
DAGLB
EHMT1
RABIF
MAN1B1
FAM24B
ABCA3
HNRNPH1
CHMP7
MRPL54
APBA3
SPPL2B
LSM7
RAB18
CBX5
TK2
CKLF-CMTM1
CKLF
EID2B
HNRNPA1
WIPI2
FMC1-LUC7L2
FMC1
MYPOP
ZNF12
PRR30
PREB
HNRNPL
TMEM250
NAGK
IFNAR1
MTHFSD
MIS18A
NDEL1
SH3YL1
ACP1
XRCC2
LOC100287896
LIPT2
KDM8
SUMF2
ALKBH5
SLC2A11
CRTC1
PATL1
PITPNB
CBY3
RCBTB2
MAP2K7
PPP1CB
YEATS4
NOB1
SOD2
CDC7
PPP2CA
MOK
TMED4
SELENOI
ADGRF3
SLX4
DCAF8
MRPL45
LOC100289561
NELFCD
TMEM141
CCDC183
RPL36
PTK2
HINT1
WDR4
CHD1
SAFB
SAFB2
OARD1
NFYA
OPA1
ZNF576
IRGQ
SRSF1
USP21
MTCH2
POLR2J3
RBM17
FUT8
BRICD5
RTL10
GNB1L
SMG9
FAM120B
VPS13A
TRMO
ZNF583
AMZ2
NUP107
EIF2D
THOP1
SGTA