ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4708085 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◢ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◣ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

EAPP
WDR74
STX5
KIF5C
TAF12
DUX4
MTRNR2L2
MSH3
DHFR
POLDIP3
CCDC200
MAMDC2
PMF1-BGLAP
PMF1
ARL4D
MTRNR2L8
UNC45B
NLE1
H4C2
H3C2
H2AC4
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
H1-2
FRG2C
TOP3B
PHRF1
NPAS4
ADARB1
H4C12
H4C11
H2BC14
H2AC14
MBLAC1
SIRT4
MTRNR2L1
DMAP1
PRAME
USP30
CCNI
ART1
TMEM107
H4C3
H1-6
H3C6
H2BC8
H2AC8
PTPN6
C12orf57
DRD4
SRSF3
MUC3A
CCDC125
SRSF7
KLHL22
MTRNR2L9
KMT2E
H4C9
H2BC12
H2AC12
FRG2
GBA
OPN1SW
CCDC136
TMEM167B
TMEM242
ZBTB4
SLC35G6
POLR2A
PAXBP1
EEF1A1
INTS12
GSTCD
H2BC11
H2AC11
CRKL
SNX16
COL23A1
CACNB2
PTPRN2
EXOC2
MKRN3
TMC4
LENG1
PRDX1
H2BC15
H2AC15
H4C5
H3C4
H2BC7
H2AC7
CALM2
SF3A3
PAFAH2
PPP6R3
POLR3E
RGPD2
RGPD1
PUM1
EIF2B3
PBLD
HNRNPH3
ZKSCAN8
H4C1
H3C1
H1-1
PTPRH
EFHB
GTF2IRD2
GTF2IRD2B
NGB
ZC3H10
RPL41
LIN28A
RPS12
LY6L
MRPS15
RPL5
H3C12
H2BC17
H2AC17
TUBA1C
HSPA1B
WDR36
LACTB
RPS27
RAB13
GJD3
RRP15
SACM1L
SLC25A51
CTNNB1
HSP90AB1
NASP
TNPO3
RBBP5
KIF2C
GTPBP3
SREK1IP1
CWC27
TTC26
KLHDC10
TRIM48
NCOA7
SUGCT
MPLKIP
SNRPB2
PRMT5
INTS6
BMS1
TOR1AIP2
TOR1AIP1
SLC9A1
TMEM262
RBSN
SSBP1
COX16
NUF2
KDM8
E2F2
MAT2A
RPL15
NKIRAS1
METAP1D
UBE2D3
BCR
KANSL3
FER1L5
NDUFS7
TRAF7
RAB26
PCBP3
ATF4
TATDN3
NSL1
LUC7L2
RAP1GAP
PHF19
DSTYK
BRF2
LTA4H
TTI2
CAMK2G
TUBA1B
FAM133B
RPL12
LRSAM1
NXF1
GET1
RPL32
FUS
INO80C
NFKBIL1
DDX39B
ATP6V1G2
MTF2
EGR1
STX10
IER2
P4HA1
POLR2J3
FAM98B
CCDC188
KNL1
COMP
H2BC5
H1-4
GDF15
VILL
STAT3
EIF4B
GINS3
BNIP1
PARP16
SEC22B
CETP
MTIF2
RHEBL1
KMT2D
BRMS1
B4GAT1
OR2T1
NME1
TBC1D5
H2BC21
H2AC21
H2AC20
RPS3
PPP1R10
MRPS18B
ATAT1
PLEKHM3
ZNF391
FLYWCH2
UBE2L3
ZNF627
ACP5
HTR5A
RFXANK
BORCS8-MEF2B
BORCS8
ZC3HC1
LOC102724770
DGCR6
CYCS
H2BS1
ZSCAN30
HSPA6
RTP3
LTF
LILRA5
L1CAM
YARS1
S100PBP
ACBD6
TACO1
EIF4A2
MRPL44
ZKSCAN4
NKAPL
AAR2
GTF2A1
TBC1D19
ITPR1
TRUB2
COQ4
SLITRK3
RPS26
RTBDN
MAST1
APELA
MED23
RBM28
CRB1
PPP6R1
RTL10
GNB1L
ID1
CCAR2
C8orf58
BCAR3
RXFP3
NBPF1
FIBCD1
VPS52
RPS18
B3GALT4
CYB561D1
ATXN7L2
EIF4G2
XKR7
SPDYC
HMGA1
SSBP2
SHF
ZBTB37
RPLP0
GCN1
H2AZ1
DNAJB14
DCTN6
FMC1-LUC7L2
FMC1
SFPQ
IGLL5
METTL25
CCDC59
JPT1
TSC1
GFI1B
MRPL21
IGHMBP2
TMEM259
CNN2
SRSF2
MFSD11
TUBB4B
STPG3
FAM166A
CSDE1
ST3GAL4
RPS20
NUP214
MAPK13
TRAF4
SPATC1L
TRIP4
PCLAF
DCAF10
ZNF385A
SLC24A1
PSMD5
LSM2
HSPA1L
HSPA1A
DCLRE1B
AP4B1
PPP2CB
ASH1L
CCDC116
NFATC2IP
H4C13
H3C11
H2AC16
H1-5
SDF2L1
NPR1
ILF2
GSTA4
RPS7
PPIL2
VPS72
PIP5K1A
SNRNP35
TIMM17A
LMOD1
IER5
SLC30A6
SURF2
SURF1
RPL7A
MED22
RPS24
POLR3A
E2F6
ZNFX1
DCT
FLNB
BRD2
FRA10AC1
SHISA4
UTP3
ZDHHC8
ZNF280A
HTR3D
TM9SF1
IPO4
RIF1
YDJC
GPN3
FAM216A
H4C8
PSMB3
PCGF2
RBMX
ANGPTL4
THOC1
C8orf37
ZBTB11
PLXDC1
RPL24
TREM1
H2BC4
H2AC6
YTHDF2
EIF1AD
CST6
BANF1
MAPK1
AGAP3
BBS1
EPB41
NABP1
TMEM101
MTERF1
SNAI1
POU2F1
TXNRD2
COMT
EPS15
CPPED1
PARK7
EIF1
DDX18
RCOR3
AQR
NSUN4
SAPCD1
VWA7
SLC34A1
DRG2
RPL11
MRPS23
POLR3B
TPR
ODR4
UBALD1
MGRN1
RAF1
TLCD1
RPL23A
RAB34
PROCA1
NEK8
IMMP2L
ZNF253
FUT7
C9orf139
ABCA2
TMEM238
TMEM190
RPL28
C11orf49
PLCD3
ACBD4
LRRN2
GPR182
AIFM3
GTF2H2
RPS15A
RPSA
CCNC
BPIFB1
STX6
ERMARD
ARID1A
PIP4P1
PNP
AMBRA1
STXBP3
CLTC
SECISBP2
CKS2
NEK2
ZBTB20
C19orf12
GDPD5
RPL19
CACNB1
BTG1
MYC
CNOT3
TRA2B
MPZL1
ZBTB33
TNFRSF21
TAF1D
C11orf54
TMEM267
NECAP2
POP7
STX16
PSMD3
TEDDM1
GLUL
ZMPSTE24
NFE2L2
TMCO2
LRIF1
FANCD2OS
BRK1
KANSL2
H3C10
H2BC13
H2AC13
RPL37
CARD6
POLG
TRIM7
FOXJ3
ZNF768
ZNF747
SCCPDH
DARS2
CENPL
RPL10
SLC44A2
PIGC
C1orf105
MRPL39
HNRNPA2B1
CBX3
SRSF1
NPDC1
ENTPD2
ZNF683
CRYBG2
SLC39A3
UQCC3
LBHD1
CSKMT
C11orf98
H3C13
H2BC18
AARS2
PPIH
MST1
R3HCC1
HMGN4
EIF2D
RSPH6A
PTPRF
FOS
MECOM
FAN1
C6orf47
BAG6
APOM
SELENOH
ERVH48-1
GABBR1
STX18
ITGB3BP
EFCAB7
OLA1
IMP4
CCDC115
NDUFS3
KBTBD4
FAM180B
KIF15
KIAA1143
ING3
EFNA3
FANCD2
SMIM5
TMEM119
MRPL40
HIRA
RAB11A
ADGRG1
LINGO1
RBM17
HCN2
ARL15
FBXO28
RPL34
LRGUK
H4C4
LRRC37A3
WBP1
INO80B
H2BC6
JUNB
MRPS18C
HELQ
ZNF598
MAP3K6
NACA
TMEM209
SSMEM1
PVRIG
ST3GAL3
KNTC1
GP1BB
SLFN12L
CYP4F11
MRPS33
UCKL1
TSFM
SNRPE
RNPEP
MED18
VARS2
GTF2H4
ZNF207
C17orf75
INTS7
DTL
OR2B2
NUP205
UBQLN3
OR51B5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MAN2C1
TEFM
VAMP4
THADA
AGBL3
FBXO8
CEP44
CEBPE
HINT3
SAR1B
CCDC90B
TMEM181
MRPL1
NBEAL2
CCDC12
PMPCB
WNK4
VPS25
BAZ2A
ATP5F1B
ELAVL3
ARAP1
RTN4
RNF6
TTYH2
RPL38
HEXIM1
NUFIP2
ADPRHL1
GALK2
COPS2
OBSL1
INHA
MLH1
EPM2AIP1
BCL3
RPS23
ATP6AP1L
SMG7
REXO4
ADAMTS13
ILF3
MOG
ZFP64
TMEM222
SLC12A5
TMA16
SNRPF
SUPT7L
SLC4A1AP
PALB2
DCTN5
TDG
C12orf73
TJP3
LZTR1
ZCWPW1
PPP1R35
MEPCE
OPRL1
RGS19
LKAAEAR1
KDM5A
CCDC77
PIP5K1C
DDX43
SCGB1C2
SCGB1C1
ODF3
RPL23
ZNF92
NDUFA9
AKAP3
GRM4
DDR1
DDX1
ZWILCH
SNAPC5
RPL4
TSPOAP1
ST7
LBP
GIMAP8
ZCCHC4
PRADC1
CCT7
FTL
RHCE
HLA-B
FBXO43
SPAG1
POLR2K
SEPTIN5
EBI3
CALB1
PEX3
ADAT2
ACTB
SPAG11B
MRPL48
CCDC106
RAET1G
U2AF2
SLC12A6
NUTM1
NOP10
NDUFC2-KCTD14
NDUFC2
RPL27
IFI35
TFAM
BPGM
MTBP
MRPL13
MRPL42
PDE11A
RBM45
ZNF184
KDM3A
FZD1
VPS13B
TMEM248
TMEM168
GMEB2
ZEB2
KPNB1
SON
GART
CHEK1
MAP3K7CL
CCT8
SLC6A9
MRPS31
GDAP1
C10orf88
SF3B3
COG4
PLIN3
ERAL1
PPIA
ZC3H15
POLR3D
CAMK2N1
TAOK1
KLHL20
MTMR9
RPS8
SECISBP2L
TTC4
USPL1
HMGB1
ZNF843
PRR3
GNL1
METTL1
EEF1AKMT3
CYP27B1
YBX1
SMARCC2
CNOT4
ZNHIT3
IFNAR1
PRRG2
NOSIP
TMCO1
YJU2
SIGLEC10
GOLGA3
NUDT5
CDC123
CCDC88A
ZSCAN12
ALKBH3
C2CD5
RPL31
MED15
ZNF581
ZNF580
CCT2
GPANK1
CSNK2B
PSMC3
EEF1AKNMT
LY6G5B
OR10P1
PTGES2
GYPA
ACYP2
ARL6IP1
METTL8
DCAF17
PCBP2
NPM1
CHMP7
BAIAP2
CYP2W1
COX19
SLC17A7
PIH1D1
ALDH16A1
SPDL1
TEDC1
CRIP2
CRIP1
SERINC2
C14orf93
TEX9
RFX7
NFYC
PDLIM2
DDX21
NUP107
RAP1GAP2
ZNF703
ZNF429
SORBS3
HNRNPAB
TIPARP
LARS2
MOB1B
INTS5
GANAB
NEU3
GNA13
CLEC3B
FFAR3
FFAR1
CCL13
CCL1
CBWD5
CBWD3
CBWD6
MARCHF7
SNRPB
SYT7
SPOCD1
PRDM7
REV3L
IFRD1
DPP9
CENPW
MCRIP2
SWSAP1
EPOR
CACYBP
WFIKKN1
METTL26
TAS2R40
H4C6
H1-3
RAD54L
DUSP1
DDX3X
TCF12
ZNF668
ZNF646
CRCP
GBX1
GOLM2
ZCCHC10
HDAC2
MEAF6
GNAI2
TBL3
RPS2
RPL3L
RNF151
NDUFB10
ATR
IARS1
ZNF518A
OR1F1
RNF168
CBX5
HNRNPA1
SMCO1
UNK
H3-3B
GTF2B
RPL22L1
MRPS36
RBM48
PEX1
KIAA1522
MDGA1
SMIM12
BRWD1
PUS10
PEX13
ATAD2
PCNT
C21orf58
MTHFD2
ERCC6L2
MRPL16
RPS10-NUDT3
RPS10
RPL9
LIAS
DYNC2I1
SND1
MRPL30
MITD1
ZNF408
ARHGAP1
ADNP
SSR3
MTF1
CSAD
KEAP1
PPP2R2C
SCG3
ANKRD63
THAP9
SEC31A
FUT10
NR1H3
ACP2
ABT1
CCNG2
SLC33A1
THAP7
RPL6
PTPN11
LRP2
PLEKHG5
CEP85L
JUND
IQCN
POU2F3
P2RX6
AJUBA
CITED2
AHCY
PRMT3
SMG9
BRIP1
RAB3GAP1
FAM89A
RABGGTB
AFAP1
MTMR2
VTA1
NMBR
TFRC
ZNF165
OR1F12
SNRPD1
PSMA1
HMGB2
OSCAR
NDUFA3
BSDC1
CCDC71L
ZNF718
ZNF595
TANK
GPR89A
LAMTOR5
TCP11L1
PPM1F
ELAVL1
GMNN
ZNF285
TTC30B
LSM5
AVL9
RPL36AL
MGAT2
CA4
RPL36A-HNRNPH2
RPL36A
BTK
SEMA6B
FAM53C
CDC25C
ZSCAN31
DNAJB12
NET1
ZNF25
PPIP5K2
NDUFS4
SLC27A4
PAM16
RBM39
NBN
REXO5
ERI2
SGF29
RREB1