ChIP-Atlas: Target genes

Potential target genes for RBM39

Query protein: RBM39
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10977194 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RBM39's Target genes

◢ RBM39: Average

◢ SRX10399318: Breast epithelium

◢ SRX10399319: Breast epithelium

◣ SRX10977194: Hep G2

◢ SRX10977195: Hep G2

◢ SRX4708037: Hep G2

◢ SRX4708085: K-562

◢ SRX6784056: K-562

◢ SRX6784057: K-562

◢ SRX7642859: Mammary epithelial cells

◢ SRX7642860: Mammary epithelial cells

◢ RBM39: STRING

SNRPB2
H4C9
H2BC12
H2AC12
PMF1-BGLAP
PMF1
B4GALNT3
H4C2
H3C2
H2AC4
H2BC11
H2AC11
H4C12
H4C11
H2BC15
H2AC15
H2BC21
H2AC21
H2AC20
H2BC14
H2AC14
ARL4D
PEX3
ADAT2
H3C12
H2BC17
H2AC17
SPATC1L
FRG2C
SRSF6
EAPP
FRG2
RPS12
STX16
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNOT3
H2BC5
H1-4
NSFL1C
EXOC2
EIF1
PRDX1
NOMO3
ABCC6
NOMO2
TMEM242
WDR74
STX5
IQSEC3
FAM53C
CDC25C
NGB
MED23
POLR3E
PSMD3
FUS
UNK
H3-3B
PSMF1
SNX16
MRPL44
ZC3H6
NOMO1
H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
ENOSF1
MTRNR2L8
PALB2
DCTN5
PDE6D
COPS7B
SRSF7
SRSF2
MFSD11
METTL23
NOTCH2
RPS20
DHRS2
KANSL3
FER1L5
NPAS4
SCFD1
CBWD5
CBWD3
CBWD6
TBC1D3J
CTNNB1
HMBS
H2AX
DPAGT1
MAT2A
KIF5C
UBC
NXF1
MTERF4
TM9SF1
IPO4
NACC2
RPS15A
CCDC200
GTF2H2
ACTB
CPPED1
METTL9
HERPUD1
HSPA1B
CCDC88A
PCK2
NRL
MTIF2
RPLP0
GCN1
C1orf198
P4HA1
UNC45B
NLE1
ACSL3
SLC9A1
NPIPA3
NPIPA2
PLA2G10
RPSA
GTF2H2C_2
GTF2H2C
STX18
TGM1
RABGGTA
MTRNR2L1
PET117
KAT14
RBM39
EEF1A1
SCML1
PRMT5
METTL25
CCDC59
TRIP4
PCLAF
SLC24A1
SLC35C2
NME1
AAR2
IL17D
TMEM41A
H1-2
MTF2
TIGD1
EIF4E2
LOC102724770
DGCR6
RBSN
ZSCAN12
GTF3C3
C2orf66
H3C10
H2BC13
H2AC13
CLTC
ZNF76
MARCHF7
ATF4
SCAND1
TSSK4
MDP1
CHMP4A
CALM2
SLC39A3
POLG2
DDX5
CEP95
RWDD1
ZCCHC3
C20orf96
KIF16B
POLR2J3
HSPA5
HEATR5A
FAM227B
DTWD1
SUPT5H
RPS16
E2F6
TTI1
RPRD1B
BRD2
OXA1L
RPS3
RPL3
RPLP1
COMMD1
CCT4
EIF2D
ACYP2
ARL6IP1
GOSR2
H4C5
H3C4
H2BC7
H2AC7
WTAP
SOD2
H4C4
HNRNPA2B1
CBX3
DUX4
RPL10A
EIF2S2
RPS23
ATP6AP1L
TMEM167B
MTHFD2
SMARCD2
MTRNR2L9
TMEM230
PCNA
RPL5
MRPL39
AHSG
NDUFAF8
DDX1
FAM118A
TLCD1
RPL23A
RAB34
PROCA1
NEK8
NABP1
ZKSCAN2
RUSF1
EIF4A3
TTPAL
DMAP1
TBL3
RPS2
RPL3L
RNF151
NDUFB10
NANP
FRA10AC1
SLC39A10
TRIM25
ALKBH3
ADAMTS9
CYCS
NUBP1
INO80D
PPP4R3B
ZCCHC4
ALG10
CDK5RAP1
UGP2
CCNI
CCDC97
UBOX5
FASTKD5
H2BC4
H2AC6
MRPL3
ASXL1
TUBGCP3
DPY19L4
PTCD1
CPSF4
RGPD8
RGPD6
RGPD5
PSMA6
DCAF10
SLC25A21
UBE2S
TMEM216
NUF2
C6orf62
ARL14EP
OR2T1
MAN2C1
UBE2F
PDE11A
ARHGEF12
TOP3B
TOB2
RPL37A
NOP14
GRK4
LDHA
SCGB1C2
SCGB1C1
ODF3
MRTO4
EMC1
YARS1
S100PBP
HECTD1
ZNF337
MRPS23
FAM234B
PLEKHM3
JPT1
ATXN2L
ZNF451
KDM8
C19orf48
GTF2B
SKP1
DNAJA1
APTX
IER5
TMEM18
MANBAL
ZNF219
TMEM253
HNRNPH1
DTD2
STAT1
SNX5
MGME1
GOLGA6L10
ATF7IP2
C2orf88
DHRS4L2
TRPC4AP
SRSF11
GTF2A1
DARS1
SLC16A1
STXBP4
COX11
SLC38A2
RAF1
GABPB1
SRSF3
TNFRSF21
RPL23
CTR9
TBP
PSMB1
BMS1
SURF6
HSPE1-MOB4
HSPE1
HSPD1
EGR1
TSGA10
U2SURP
RBL1
PRORP
PPP2R3C
COQ7
SEC14L1
METTL8
DCAF17
MOB4
RPN2
MROH8
CCN2
INTS12
GSTCD
TAF1D
C11orf54
ATF3
DCP1A
CZIB
RDH14
C14orf93
MRPS33
PABPC1
GORASP2
MTRNR2L2
MSH3
DHFR
AP1G2
FOS
HAUS4
HNRNPAB
WDR11
DHRS4L1
TPK1
RTF2
ZNF124
TUBA1B
NDE1
MARF1
ZSCAN9
GCLC
HSP90AA1
FAM98B
GSTA4
MIPOL1
ARL15
PGBD1
SNX11
CBX1
TOB1
LRRC59
SEC13
MCL1
MIA2
ANKRD46
TP53I3
SF3B6
FAM228B
ZBTB4
SLC35G6
POLR2A
SNRPB
PIP4K2B
NBN
CHGB
ANKRD36
HUS1
ATP5MC2
AJUBA
PCIF1
C16orf89
ALG1
RAB37
PCTP
APBB2
WASHC1
TRA2B
CHD8
TDG
C12orf73
ACIN1
OTUD7B
AARS2
RPS3A
NPM1
PTP4A1
MTMR2
SLX4IP
MKKS
DHRS4
NCL
RMDN2
C6orf226
KPNB1
ZNF384
TTC4
RNF6
NUDT4B
NUDT4
PBLD
HNRNPH3
UQCC3
LBHD1
CSKMT
C11orf98
LMLN2
C14orf119
DCAF11
VRK2
SDCBP
GGA2
H3C6
H2BC8
H2AC8
NUP214
ZNF207
C17orf75
XRN2
VPS16
PCED1A
MAIP1
RPL27A
MYL12A
CCNL1
SRCAP
LOC730183
ISOC1
REPS1
TEFM
RPL19
CACNB1
PPP1R3E
BCL2L2-PABPN1
BCL2L2
SLC9A8
ADRA1D
ID1
MAPK11
RBBP6
BRWD1
RANBP9
PSMD7
TATDN3
NSL1
ATR
ZWILCH
SNAPC5
RPL4
TINF2
NEDD8-MDP1
NEDD8
GMPR2
SYS1
NCOA3
TUBB4B
PARPBP
NUP37
MTX2
STPG3
FAM166A
TBC1D5
SMARCE1
TRMT11
FAM83D
MCM7
AP4M1
ANKRD36B
PDRG1
RAD54L
HDDC2
SPHK2
RPL18
FAM83E
NEU1
KPNA2
CCNC
MRPL16
CSNK2A1
WDR31
BSPRY
TAF3
ZFP1
NDUFC2-KCTD14
NDUFC2
ANKRD36C
IRF9
THUMPD1
PTRHD1
CENPO
SDC4
TBPL1
TMEM254
MAMDC2
RPL31
GTPBP10
NDUFAF3
IMPDH2
DALRD3
RTN4RL1
DPH1
KAT7
CLK1
RBM34
WDR43
INO80C
CEBPE
AGK
GOLGA6L4
RNF146
SUV39H2
MFAP3
FAM114A2
ERCC6L2
HDAC4
LMAN1
C5orf24
MSANTD2
CCNG1
KIAA1586
OAZ1
CFL2
FAM174C
CIRBP
STAM2
NXT1
STAMBP
APOB
CDC7
PTPN2
STAT3
SECISBP2L
TEDDM1
GLUL
REXO5
ERI2
DDX59
GABRR1
NBPF1
GDAP1
STX6
ABCD3
ICE2
MRPL58
CITED2
KANSL1
SRP54
CFAP20
LATS1
ACVR1
CDH24
DENR
TEX14
RAD51C
RBM45
CSTF1
AURKA
IRF2BP2
BCAS4
PRADC1
CCT7
SLC44A1
CBWD1
DDX19B
AARS1
GMNN
MAGEF1
CHMP3
TFRC
TMEM14A
CASP5
TAF15
MRPL35
IMMT
KAT6A
MRPS35
H3C13
H2BC18
PLK1
SAR1B
SDR39U1
TRIP12
FBXO36
SLC20A1
RFX3
MRPL27
EME1
DGUOK
SYT7
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
LMNB2
LINC02210-CRHR1
RPS6
ANKRD40
RIPK1
ZNF282
VPS52
RPS18
B3GALT4
SRSF1
VTA1
NMBR
IST1
ZNF513
SNX17
EIF2B4
BTNL10
RBM28
VARS2
GTF2H4
PIGBOS1
PIGB
PELO
ITGA1
POLE4
H3-2
CCDC116
YDJC
RBBP9
NPHP1
MTLN
FERMT1
XPOT
SRRM2
FAM207A
ERBIN
ZNF609
ZSCAN30
TMEM267
TRDMT1
CRBN
PYROXD1
SSX5
PRKAG1
DNAJC16
CASP9
HSPA9
BAHCC1
NDUFS7
DRG2
HNRNPC
DUSP1
NOP56
ZNF181
PRKAR1A
RPL37
CARD6
RPL12
LRSAM1
VAMP4
SMIM12
PCBP2
TMBIM4
MMADHC
AGL
ADPGK
ZNF23
RIF1
RHEBL1
KMT2D
C2CD5
SENP1
PFKM
VWA8
CYLD
CHRFAM7A
TBC1D19
TRAPPC6B
PNN
RAB5IF
ATP5F1E
MYLIP
CRLS1
H3C3
H2BC3
MRPS31
MFF
ZCCHC7
NFE2L2
TANK
RNPS1
TMEM94
NAA20
RPL36
MICOS13
HSD11B1L
BZW2
ANKMY2
NAGK
CHD2
RALGAPA1
ANKRD17
NDUFB2
BCKDHB
TACO1
STX10
IER2
NFYC
GPN1
CCDC121
RPAP2
GLMN
PKP4
CCDC148
DR1
ITGAV
AMMECR1L
ASNS
TCTN3
RPS8
ZFHX2
THTPA
ATP5MC3
GTF2H5
FAM133B
EXOSC6
TOMM6
PRICKLE4
FRS3
CASC3
SRF
CUL9
MRPS11
MRPL46
TGOLN2
VSNL1
RAD51AP2
HOMEZ
YWHAB
EFHC1
AGFG1
TCAF1
NANS
SLC30A6
HINT3
PSMC5
FTSJ3
KAT8
BCKDK
PTPN4
MRPS7
MIF4GD
GGA3
SLC32A1
AGPS
ANXA4
TNPO1
SH3GL3
MTHFD2L
NT5DC1
SUPT3H
TOX4
RAB2B
TRMT61B
FTH1
GADD45A
PBK
SERINC3
PKIG
REV3L
SEC62
SESN2
SEPTIN2
HDLBP
SPOCD1
SKIV2L
NELFE
CSE1L
NARF
CYBC1
DDIT4
RRM2
NMNAT1
LZIC
HSP90AB1
LIMS1
RNF39
PPP1R11
POLR1H
SLC35B2
TMEM14B
RPL13
ASB1
AMACR
LOC100130520
CD300H
C17orf77
DCLRE1B
AP4B1
COG2
HEXIM2
RPL17-C18orf32
RPL17
C18orf32
TMEM186
PMM2
SDCBP2
PPA2
SRSF5
NET1
UBE2R2
RAB3IP
ZNF391
EIF4A2
ERMARD
RAD54L2
NOL10
SLC3A2
TUFT1
POLR2J
GBE1
AP5S1
ZFAND3
RTN4
MECOM
ZNF248
NUDCD3
IER3
FLOT1
GOLGA6L3
NOL7
SGCA
EDC4
SPAG11B
LIMCH1
OR1F1
FAM86B1
THOC1
EDEM2
SLC26A8
MAPK14
PCID2
CUL4A
ASCC1
ANAPC16
TRAF6
RAG1
NRSN2
SLC35D1
ZNF770
SLC25A6
AURKAIP1
LZTR1
IARS1
G2E3
MRPL2
KLC4
CUL7
CORO1A
RGL2
PFDN6
ZNF518A
NPIPB9
GABPA
ATP5PF
LRP10
TMED7-TICAM2
TMED7
MRPS15
UBFD1
EARS2
GDF15
LRRC25
AKR1C3
LRRC37A3
SLC1A5
SGF29
RRN3
MAPK1IP1L
KCTD5
CYP20A1
GINS1
MAT2B
CENPC
CYP2E1
USP42
STEAP2
SLC5A6
CAD
ATRAID
C12orf65
TUBA1C
STMN3
RTEL1
PPIA
UNC50
COA5
ERGIC3
RABL2A
SNRNP200
CPE
NFATC3
SMC3
ZNF865
ZNF524
FIZ1
C2orf42
SEC23A
DEFB132
TUBB2A
USPL1
HMGB1
SLC35B1
RPS10-NUDT3
RPS10
FUT10
TMEM177
WIPF2
SMIM8
GJB7
OMA1
DAB1
MRPS28
ZSCAN16
RETSAT
ELMOD3
FAM110A
UBE2D1
CMC1
SLC35A3
BHLHE23
CWC22
PPP1R10
MRPS18B
ATAT1
PSMD14
EIF3C
MPIG6B
LY6G6C
DDAH2
CLIC1
MSH5
FOSL1
CCDC85B
CHD1
PON2
FBXO4
WDR55
DND1
RNF138
AATF
EBAG9
ZNF780A
MRPL40
HIRA
SREK1IP1