ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457295 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◣ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

MARCHF9
CDK4
GET4
PLD6
KAT5
CRY2
AGAP11
ADIRF
PER2
CRY1
CLUAP1
C16orf90
PER1
NKIRAS1
NR1D2
CIART
DBP
RALGDS
PIP4P1
NPTN
BCAR1
RORC
LAMP1
RAD9A
TRAPPC6A
BLOC1S3
CLCN7
SLC35A5
ATG3
COMMD8
ANKRD12
CDK12
HOXC13
LRRC56
HRAS
SNRPE
TMEM116
ERP29
KHDRBS1
NR6A1
DENR
TEF
MAPK6
RBM39
GTF3A
PTBP1
DOCK6
DHX35
RNF43
ZNF292
YPEL5
VPS11
ELAVL3
NOL8
CENPP
AP5Z1
ARFGEF2
HPS5
GTF2H1
NR1D1
PIK3IP1
EIF5A2
MTHFR
CLCN6
PER3
TRPV4
WASHC2A
OSGEP
APEX1
FRG2C
PLEKHF2
STX4
UVRAG
IGSF8
UBE2B
CDKL3
FAM76A
PSMD5
HOOK2
DUX4
ERCC6L2
RPUSD4
FAM118B
EMC2
CLN6
VPS26A
LNX1
RNASEK
C17orf49
SPG21
SLC35B2
RHOF
MICALL2
MAP2K7
SLC33A1
TRIM37
TRAPPC2L
GALNS
OSGIN1
AVPI1
AP1S1
WASHC2C
SNRPA
C19orf54
TXNIP
IFRD2
IP6K1
ZNF331
HES4
PFDN4
BCAS3
MAP4K1
EIF3K
TMEM185B
ATP6V1H
YBX2
PTEN
KLLN
LRCOL1
P2RX2
TNNI3
SPNS1
ARRDC4
RPS11
PPP1R3C
GYG1
SERF2
WDR62
THAP8
PHKG2
TMEM18
PLEKHG5
UBAP2L
C1orf43
PRDX6
B3GNTL1
ISOC2
NOP14
GRK4
SLC20A1
ILF3
SLC25A26
PNPLA7
MRPL41
TUBGCP5
FNIP1
SPPL3
TRIM59
MRPS23
KLF1
GCDH
HIF1A
ZNF438
KDM4C
TBCEL-TECTA
TBCEL
SLC25A13
UBE2Q1
SPATA25
NEURL2
CTSA
NPR3
CCDC200
BCAM
ADNP2
AMDHD2
ZNRF2
GMFB
STAT6
USP32
HERC3
COMMD9
FIBP
CCDC85B
FAM117B
PMS2
AIMP2
RRAGB
CLN3
APOBR
RAB17
PC
DPP3
CREBRF
RMND1
ARMT1
TIMM22
ABHD11
PDE12
BAX
TRMO
MAP1LC3B
FBXO31
IGSF21
SLC25A11
RNF167
SLC25A36
EPM2A
NUDCD3
CSTF1
AURKA
NME1
MTHFD1L
SUMF1
CCDC24
SENP8
MYO9A
LCN12
C8G
MYDGF
IREB2
FZD1
CFAP251
GTF2A1
CAMKK1
KDM6B
LYRM9
NAPRT
MROH6
ZZZ3
LRFN4
TBC1D13
CEP63
ANAPC13
MED1
ADGRB1
LSM12
G6PC3
THAP5
DNAJB9
KLF11
HEXA
THRAP3
GZF1
CTTN
DACT3
MACROD2
PUM2
ATXN2
DPH2
B4GALT2
ATP6V0B
LAMC1
EPB41L4B
PHF23
DVL2
TRIM8
ZNHIT1
PLOD3
GABARAPL2
AEN
DDX5
CEP95
KLHL12
FAM214A
RFESD
CEBPB
TLE6
HES1
SLC25A10
UTP18
MBTD1
ZBTB37
MAL2
PEX14
DFFA
MTCH2
CLN8
EIF4G1
MIOX
ADM2
VPS33A
MAX
SLC49A4
HSPBAP1
ZNF263
PPFIA4
ATOH8
PPP1R3D
FAM217B
TBC1D17
AKT1S1
WDR89
ANKFY1
MVB12A
ISG20
ZNF706
RNF223
COX14
ADGRE5
SYNGAP1
CUTA
MEA1
SPTBN4
BLVRB
OSBPL1A
ARF3
HNRNPH2
GLA
CCNB1
ASPH
GCLC
MTDH
GREB1
DHODH
XRN2
POLI
INO80
SRP54
SPAAR
HBP1
DLX4
ZC3H4
FRG2
USP36
RIMBP2
GBE1
SGO1
CCDC86
SLBP
SLC2A4RG
LIME1
TJP2
PSME3
POR
RPEL1
RRAGC
ZNF84
STRIP1
C1orf174
GGA2
STMN1
GSTP1
STYXL1
MDH2
YARS1
S100PBP
ESYT3
MAPK15
ZHX2
STXBP4
COX11
SCAF11
INSIG2
C2CD4D
SLC26A8
MAPK14
FOXN4
IGFL1
HUWE1
G3BP1
NDUFS6
MRPL36
TXNRD1
SLC35A4
APBB3
ALG13
RAD50
TBC1D15
MTRNR2L1
UCKL1
NFX1
CNNM2
PRRG2
NOSIP
FLCN
SLC12A4
EIF3B
H2BC12
H2AC12
DGAT2
SMARCD2
CYB561
CPNE7
YDJC
CCDC116
TMEM88
NAA38
CYB5D1
LTV1
EIF4A1
PABPC1
PNPO
TIPARP
COPS7A
OR2B11
CBFA2T2
THNSL1
SOCS5
ATIC
ERGIC2
PPAT
PAICS
PDP2
C15orf39
RNF13
HSF2
NTMT1
MUC3A
PACSIN3
PIK3R3
TRIB1
CLTC
TMEM53
ARMH1
ABCA3
NAT10
SLC25A39
CD164
TATDN2
CCDC186
TDRD1
UBR5
STX6
TOP3A
SMCR8
ERCC1
JUNB
CCDC6
TBC1D30
GNS
CNOT3
RBBP6
ZNF219
TMEM253
OPRL1
LKAAEAR1
STX16
PRPF3
EXOSC5
BCKDHA
CCDC107
PPM1H
CHFR
RRP9
PARP3
NAMPT
DHX40
MFSD4B
GALNT18
RPSA
PDPR
ORC4
MBD5
UPF3A
FAM214B
KPNA3
DCBLD1
NSUN3
DHFR2
METAP1D
DEF6
TIPIN
SYNRG
CIB3
SLC25A19
PPP4R3B
CC2D1B
PLEKHG2
ALOXE3
TRIP6
ADCK1
RC3H2
ZNF57
PDK2
NCOA3
CENPN
TENT5B
RCHY1
HNRNPA1
CBX5
CENPA
RTN4RL1
DPH1
APPBP2
KPNA2
TARDBP
HPS1
CD37
UBN1
GLYR1
LFNG
ALCAM
SLC39A6
ELP2
ARL4A
GOLIM4
CAD
ATRAID
NAPA
TANC2
DEFB116
SLC35E3
UCP2
IQSEC1
SLC12A6
NUTM1
NOP10
TMEM184A
TPD52L2
ABHD16B
PARD6B
ATG101
BCAS1
TOR3A
ILVBL
NFKBIL1
ATP6V1G2
WDR77
ATP5PB
HDAC4
MLH1
EPM2AIP1
CSRNP1
YIF1A
TMEM151A
C5orf51
SPATA2L
ZFPM1
AIG1
SBNO2
SETD6
PTCD3
POLR1A
CHKA
ATF7-NPFF
ATF7
LIN54
TBL1X
SNAI1
MARCHF8
PPM1D
PRKAR1A
DDX3X
PPP1R10
MRPS18B
CMTR2
PSMD6
KCTD9
CDCA2
NCOA4
SCAP
POLR1D
LNX2
TMEM79
SMG5
LAMTOR4
NUP188
DOLK
ACAD9
L3HYPDH
JKAMP
SPAG9
TNPO2
YOD1
PFKFB2
USP17L22
USP17L20
ZNF286A
SLC26A9
BCAS4
FBXO5
MAGT1
COX7B
MYL12A
MICOS10-NBL1
MICOS10
ZFP36
MICU1
RCCD1
SLC35E2A
WDSUB1
PNO1
ATP5MC1
MRPL45
PUF60
SAC3D1
MCCC1
PLD3
C19orf47
TMEM248
BTBD10
ADK
VMP1
PTRH2
MXD3
PLEC
ZNF778
LAMTOR1
SF1
COA7
HMGN2
MRPL40
HIRA
PRKAG2
RNF26
FCMR
MTMR14
LONP1
CATSPERD
GIPC1
HNRNPD
DOK7
SUPV3L1
TET3
UTP20
SIRT1
TIMM44
SOX12
WASHC4
ACAP2
SKA3
MRPL57
FAM200B
PSMG1
PFAS
CTC1
FBXO33
ATL2
METTL17
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MEF2D
ATAD2
WIPI1
RBBP8NL
SLC45A4
DYRK3
GDI2
NMRAL1
HMOX2
NRAS
TSTD2
NCBP1
SPTSSB
AMMECR1L
ERICH6
MAD1L1
FAF1
VPS8
PDIA4
NRDC
CDC5L
TCERG1
COLEC11
TAF1
SNX8
ADGRE2
TSPYL6
PPIA
SLC39A4
CPSF1
SETD4
STXBP1
BNIP5
PRORP
PPP2R3C
KHSRP
ZFP62
SH3GL3
NOCT
TTC32
TCFL5
PTDSS1
MTERF3
NPM1
HSPH1
CYC1
LPIN3
TMEM94
ZBTB10
ATP6V1C1
BHLHB9
CCNA2
DDX42
CCDC47
GPHN
MDN1
LARP1
FOS
FNTB
C6orf62
NADK
RGS22
SPATC1L
IRF2BP1
PDXDC1
CALM2
PKNOX1
DCLK2
SNX16
GSKIP
ATG2B
DHDDS
CDIPT
GLS
PGP
BRICD5
HPSE
DOHH
RAD23A
LRP6
MADD
ZBTB7B
DNAJB5
PSMG4
BCL6
LUC7L2
ZNF408
ARHGAP1
UGDH
WTAP
SOD2
XKR9
LACTB2
TUBD1
RPS6KB1
FUBP1
DNAJB4
CAMLG
GPSM2
ARRB2
METTL1
EEF1AKMT3
CYP27B1
DUSP7
RPP25
RNF34
RAB40B
CAMKK2
EIF3E
RNFT1
COL26A1
RBBP5
RPS29
BMF
MCCC2
SRSF10
LOC102723996
ICOSLG
RPL27
GFUS
BCL9L
PPP1R13L
POLR1G
BRWD1
MET
WDR74
CNPY2
AKAP10
PLK3
ZNF165
DDT
UNC93B1
ALDH3B1
WDR25
WARS1
TWIST2
PPM1A
ABHD2
C12orf45
FKBP4
TMEM164
LOC114841035
FKBP2
OSBPL2
STMN3
RTEL1
GIT2
ANKRD13A
TFF1
CACHD1
ROPN1B
TMEM80
DEAF1
STAG1
ANKRD40CL
FURIN
COQ10B
PES1
STK35
HOXB8
HOXB7
FOXRED2
PUSL1
CRYM
ACAP3
RBM15
SLC36A1
REXO4
ADAMTS13
UMPS
ISCA1
MIDEAS
PPARGC1A
METTL23
JMJD6
WWOX
ESRP1
TTLL4
AHCTF1
KLF10
ZNF248
CANX
SGK3
RPS19
BMP7
GNB2
NAB2
EXOSC2
DUS3L
SQLE
UBE2S
SLC25A32
DCAF13
FUS
AFF4
CYRIB
UQCRC2
FAM86B2
RAB3D
TMEM205
CCDC159
TMED3
ASB6
CASC3
QRICH1
GCGR
KMT2E
SRFBP1
CCNYL1
LRATD2
HNRNPF
C14orf93
CIPC
PCBP1
MRM3
GLOD4
BRIP1
MACROD1
PAK1IP1
C6orf52
TAF9
RAD17
AK6
BHLHE41
ASNS
NUCKS1
ZER1
MAN1B1
TRPC4AP
TTC7A
MCFD2
TSEN54
CASKIN2
RHOD
DCLRE1B
AP4B1
TPR
ODR4
CDKN3
MTCL1
ASS1
SMG9
SLC35E2B
APC
FRAT2
CABIN1
BTN3A2
KLHL22
SREBF1
ATG16L2
DDTL
WDR35
CALML5
SNAP29
PI4KA
PMVK
TMEM143
SYNGR4
ABCF1
PIM3
CSDE1
GRHL2
OSER1
SYS1
TAGLN2
PDE4A
TDRD5
PRC1
SLF2
COL23A1
USP17L21
USP17L12
USP17L11
MRPS2
C9orf116
SHMT1
RNMT
FAM210A
RLF
ABAT
IFNGR1
ZNF696
LCORL
THAP7
MMS22L
PRCD
CYGB
SIKE1
SMG7
DUSP28
ANKMY1
UBFD1
EARS2
ADGRG7
TOP2A
CKS2
ZCWPW1
MEPCE
PARN
BFAR
ING5
ZNF239
NBPF15
CORO2A
SRCAP
LOC730183
SLC2A8
CORO7-PAM16
CORO7
EBPL
EOLA2
RPS14
LIN52
ALDH6A1
ESRP2
PSMD9
HPD
DENND2C
DDX18
CDK18
SYNCRIP
BANP
STK40
ELAPOR1
TBCB
POLR2I
OVOL3
SIX5
SLC35C2
SETDB1
PBX3
RAB3IL1
PTPN4
CENPF
RITA1
DDX54
LRRC8B
CASP7
DNASE2
UBA52
PDIA5
SCN5A
C20orf27
SUPT5H
PPP1R3B
NBN
YTHDF1
TMEM14C
CDK1
PRRC2B
TTC39A
LOC391322
OBSL1
INHA
SURF6
SLCO4A1
NOL11
FAM174C
ASH2L
CPEB1
TMEM87B
TTBK1
MARVELD1
TWNK
MRPL43
SLC26A2
TRIP4
SPRR2F
RCBTB1
C9orf139
ABCA2
NCL