ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457525 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◣ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CRY2
PER1
CRY1
CIART
DBP
AGAP11
ADIRF
PER2
CSDE1
NR6A1
TRAPPC6A
BLOC1S3
TEF
CLUAP1
C16orf90
DAZAP2
INAFM1
S100A13
CHTOP
DDX5
CEP95
ERCC6L2
PFDN4
MORF4L1
BCAS3
RORC
DDX42
CCDC47
SNRPE
NPTN
NR1D1
NOL8
CENPP
PIP4P1
XPOT
KMT2E
SRSF1
LRATD2
TRIM37
SRSF5
HMGB2
TOB1
SDR39U1
ARRDC3
GSK3B
KAT5
PLEKHF2
EIF3B
BCAR1
CCNL1
DUX4
TRIQK
MAPK1IP1L
PLD6
OSGIN1
THOC7
ATXN7
FRG2C
PPM1D
EIF5A2
NAA50
ATP6V1A
PRORP
PPP2R3C
BRIP1
COQ10B
RMI1
HNRNPK
SEPTIN2
HDLBP
BCLAF1
TPD52L2
ABHD16B
APPBP2
RBM39
LNX1
HNRNPA2B1
CBX3
USP32
NCOA3
TCF25
ARIH1
EIF4B
ALG13
DHPS
TXNIP
FAM76A
PAF1
MED29
YPEL5
IGSF8
PTBP1
FNBP4
HOOK2
NFX1
SRCAP
LOC730183
RFX3
PRKAR1A
SRP9
MMADHC
EMP3
CCDC114
SRP54
TM9SF1
PRPF3
RCCD1
EIF1
SLC25A25
NAIF1
MARCHF9
CDK4
TUBD1
RPS6KB1
TMEM187
HCFC1
RNF43
ZNF263
TUBA1B
CLN6
TMEM141
CCDC183
ECH1
ZMYND8
MED13
MAP1LC3B
FBXO31
YEATS4
MCM7
AP4M1
EED
LRRC56
HRAS
SLC20A1
NFYC
ITGB1
NR1H2
SLC3A2
MAPK6
UNK
H3-3B
KAT7
BRPF1
NRAS
SREK1
CEBPB
SCAF1
RRAS
PPP2R5C
HEXIM2
USP48
RBM3
HNRNPF
RALGDS
HNRNPC
TRA2A
ZNF687
PTEN
KLLN
NBN
CHMP2B
DDX23
EIF4A2
DOCK6
PCNT
C21orf58
SLC35C2
PPP1R3D
FAM217B
CLK1
EIF5
ZCWPW1
MEPCE
ZFP91
LPXN
PCIF1
HIRIP3
GET4
LRCH4
FBXO24
SON
GART
PIGO
UBQLN1
TMCC1
ZNF335
RFESD
ILF3
UNC13D
TUBA1C
FBXO46
ARRDC4
CAP1
PRKDC
MCM4
PLEKHG5
SERINC3
ELOB
PTP4A1
OGFOD2
ARL6IP4
ANAPC7
C2CD4D
SKA2
PRR11
TRA2B
AHI1
GABPB2
RIPK2
SULT1A4
SULT1A3
BOLA2
SLX1B
SLX1A
BOLA2B
TRMT112
PRDX5
CD55
BCAS4
SNX5
MGME1
PDCD6IP
SLC43A2
ZNF24
KIAA0895
ANLN
SLC25A24
SULF2
SRSF4
FBXW4
COX19
TSPAN31
AGAP2
PHKG2
MED26
MADD
ENSA
EGR1
PPIL3
NPC1
NIF3L1
YWHAZ
NCAPD2
MRPL51
ZNF217
HPS5
GTF2H1
MOCS3
DPM1
RABGGTA
GPBP1
RNF139
DDX6
ZFP1
PPP4R3B
TMEM251
MOAP1
USP9X
PPP1R15A
PLEKHA4
CALM2
TNFRSF12A
THOC6
HCFC1R1
DDIT4
CLDN6
PTCD3
POLR1A
PAIP2
SERF2
SERTAD3
SARAF
ZC3H11A
ZBED6
SESN1
CEP57L1
CYTH2
PHF12
SF3B4
COPS3
BRD2
KIFC1
CLTC
WDR6
UBE2M
CHMP2A
PPP1R3C
TBX2
DNAJB1
UTP18
MBTD1
NPR3
MZF1
OSGIN2
MYL6
C1orf54
APH1A
SMC4
MDM2
IFT80
NUDCD3
SYT1
ZBTB7B
ISOC2
SETD1A
RPL10
ST20-MTHFS
CD2BP2
CBLL1
DDX59
BOLA2-SMG1P6
HNRNPH1
PLK4
FAM214A
LRCOL1
P2RX2
PPM1A
RNF31
PSME2
STAG2
MAMDC2
PPIA
UBE2T
FBXL18
KMT5C
C6orf62
SYNCRIP
DDX43
WDR81
GMNN
ANKRD12
SPATA2
TOR1AIP2
TOR1AIP1
DUSP1
PPP1R15B
TMED10
KIF22
ZNF438
POLR1D
LNX2
PNRC1
TMEM116
ERP29
TAF7
SRSF6
ADNP2
RCE1
NOP58
RNH1
ARF6
TPT1
UBAP2L
C1orf43
ZZEF1
CYB5D2
TSC22D1
SYVN1
CREBZF
H4C14
STX4
UCP2
GNAS
CSE1L
SRRT
CHD1
NPDC1
KEAP1
MED15
RNF13
PNISR
WBP1
INO80B
PRC1
EIF2B5
TUFT1
TADA3
ARPC4-TTLL3
ARPC4
CD164
ZCWPW2
AZI2
KRT80
CUL5
TANK
BUB3
TIMM22
PRKCI
ZC3H6
TFAP2C
PPP2CA
HARBI1
ATG13
MICALL2
WDR74
LLGL2
GABARAPL2
FNIP1
TMEM69
PPIG
GPBP1L1
CIC
UBA1
TRIM52
DDX19B
CACYBP
CHMP3
RNF6
KRT8
SPOP
POLD3
KRT18
GOLGA5
HBP1
CHFR
MTHFD2
RIN2
FLCN
GABPB1
AP1G1
IRF2BPL
H3C15
H3C14
H2AC19
H2AC18
CDIPT
PRMT2
TREX1
STAM2
PNPLA7
MRPL41
LYRM1
DCUN1D3
FAM117B
BCL9L
ZBTB4
TRIM33
TMEM138
SLC35G6
POLR2A
CYB561A3
H2BC21
H2AC21
H2AC20
DARS1
ZBTB8OS
RBBP4
NSUN3
DHFR2
ZNF274
TMEM18
MARS1
ARHGAP9
NTMT1
TFAP4
DHX40
UVRAG
ZNF384
LSM5
AVL9
DPP3
UBALD1
PSENEN
LIN37
IGFLR1
JADE2
JUND
PCBP1
NME1
LUC7L2
FMC1-LUC7L2
FMC1
ST6GALNAC2
NUP62
MIB2
LPP
IL4I1
ATF5
EMC2
HSF1
BOP1
TMEM258
PTOV1
IRF2BP2
FEN1
C17orf58
YTHDF3
RAB11A
GSPT1
PPP4R3A
UBC
THNSL1
TAX1BP1
ACTG1
TAX1BP3
EMC6
DMTF1
AMOTL2
ZBTB21
ELP5
CTDNEP1
PMS2
AIMP2
XRN1
PHF19
TRPV4
LATS1
PRDX6
ACYP2
FANCC
EMP2
CRCP
TSPYL1
DSE
RNASEK
C17orf49
CTDSP2
SENP2
GABPA
ATP5PF
PRPF8
BAZ1A
NKIRAS1
RPL15
TMBIM6
H2BC4
H2AC6
GTF2A1
KLF10
PPP1R13L
POLR1G
TYW1
SBDS
RACGAP1
CSTF1
AURKA
CENPN
DUS3L
POMT2
GSTZ1
CAPNS1
CUL4B
PIK3IP1
MAP2K7
SNRPA
C19orf54
MAT2A
UPF2
ICA1
ACTB
HNRNPDL
ENOPH1
PMEPA1
UXT
CEP63
ANAPC13
H3C6
NUBP1
PTGES3
PSMC5
FTSJ3
ETF1
SPATA17
GPATCH2
BCL2L1
ARPC3
BCAM
RBBP5
H4C15
DNAJB12
SWI5
SLC2A10
HSPA8
GOLGA2
DAGLB
PARD6B
MRPS18C
HELQ
EAPP
POLR2J3
BCL6
PURB
MBTPS1
RNF19A
CSNK1A1
DYNC2I2
EEF1A1
ALDOA
CELSR3
PSMD6
ATXN7L3B
ABHD11
RLF
DNPEP
SLC33A1
GID8
DIDO1
HIPK3
GBE1
GDF15
RBM8A
GUK1
CNOT2
RPRD2
SLC25A36
ERBIN
PC
TIAL1
ST7L
MATR3
CAPZA1
CHURC1-FNTB
CHURC1
H2BC12
H2AC12
TCERG1
SETDB1
TPD52L1
FTH1
PTPN1
TMED1
SLC37A4
PIGW
MYO19
CMTM4
SLC35A5
ATG3
ANP32B
FIBP
CCDC85B
TNNI3
NOL11
HIF1A
PHC3
WRAP53
TP53
IFRD2
CCDC24
MSH5
CLIC1
ADK
DDB2
ERGIC2
SMG9
SHC1
CKS1B
BCL7B
MTCH2
UQCRC2
WDR13
SDHAF2
RAB5A
EFHB
CPSF7
NR4A1
RFWD3
ARMC8
U2AF2
ZNF791
ZNF490
WTAP
SOD2
ATG101
SHOC2
BBIP1
ARCN1
CIPC
HIPK1
PGP
BRICD5
G3BP1
FAF2
TXN2
ZAR1L
BRCA2
RPN2
NUP160
NDE1
MROH8
MARF1
BRMS1L
KPNA2
SEPTIN9
TIMM9
KIAA0586
MYL12A
FBXO33
ARFGEF2
FBXO5
SUPT16H
POP7
SDSL
RAD9A
TINF2
AZIN1
TET3
OSGEP
APEX1
BANP
SETD3
CCNK
HES4
LSM12
G6PC3
RBM22
SIRT4
KDM6B
TRMO
SCYL3
UBE2B
CDKL3
RPSA
H2BC11
H2AC11
ZBTB25
ZBTB1
PSMG3
CD58
SLC39A6
ELP2
IFRD1
FBXL19
LAMA5
DIAPH1
ZWILCH
RPL4
TMEM64
ZNF706
PNO1
TTC3
PIGP
RAB3GAP1
NFE2L2
DDX3X
SNW1
SMIM13
ATF7-NPFF
ATF7
CACNG4
RITA1
DDX54
ELK4
WBP11
C12orf60
YY1AP1
DAP3
CASC3
MCM9
COPB2
ZZZ3
RBBP6
STK40
SRSF7
SRSF2
MFSD11
DACT3
STRADA
STAT3
FERMT2
SHMT2
PMF1-BGLAP
PMF1
IQCE
HOXC9
HDAC4
DOP1B
RGS9BP
ANKRD27
CAMSAP2
ZNF627
MLF2
IP6K2
SLC2A4RG
LIME1
FAM53C
CDC25C
WDR97
MAF1
SLC25A40
DBF4
GAS2L3
ZMYM5
RND3
SLC35B1
LRIF1
BZW1
PPFIA4
MON2
CLK4
PPP6C
MRPL35
IMMT
HEXIM1
MINK1
METTL2A
PPP1R37
ING1
RPS11
IQANK1
FAM83H
USP36
YARS1
S100PBP
DZIP3
CIP2A
SUCO
MLH1
EPM2AIP1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NDUFAF5
ESF1
PLA2G6
MYH14
CRADD
ERAP1
BNIP1
PSMD5
CENPA
PSMC3
DYRK1B
ANKRD13D
TARDBP
TBL1XR1
MDH1B
FASTKD2
MPC2
DCAF6
CNNM2
CDK19
AMD1
RAP2A
SPG21
RPS19
NAB2
MARVELD2
LDLR
RAN
TASOR
TAGLN2
CBWD5
CBWD3
CBWD6
SNRNP200
EPM2A
PEDS1-UBE2V1
PEDS1
TSTD2
NCBP1
TM9SF4
METTL8
GPSM3
DCAF17
PRRC2C
SETD5
S100A16
SEC61B
ATP6V1G1
KLF1
GCDH
ZNF219
TMEM253
SLC39A7
RXRB
HSD17B8
FBRS
PSMC1
FUT8
TENT5B
FUBP1
DNAJB4
PDXDC1
SSU72
IER5L
BRWD1
PDE8A
MRPL23
DPY19L3
CCDC200
CDK12
LEKR1
SKIL
SEC62
ERBB3
EXOSC5
BCKDHA
TYW1B
PCF11
MED7
SLC25A5
ZNRF2
TRIP11
ISG20
ZNF672
TRAPPC6B
PNN
JUN
BTF3
KHDRBS1
FAM86B1
HSF2
RAB8A
ZNF700
ADGRG6
PDAP1
BUD31
SNRNP35
SMIM14
PPP2R1A
ESRP2
VEGFA
SCAMP1
DHX15
THAP5
DNAJB9
VMP1
PTRH2
VAMP2
TMEM30B
PRR15L
GPRC5A
NR2C2
USP43
TBC1D9
LOC730098
H4C1
H3C1
H1-1
CNOT1
CCL27
UBE2D3
MAL2
WDR4
SARNP
ORMDL2
DIP2A
RFXANK
BORCS8-MEF2B
BORCS8
SRRM1
RAPGEF6
MYO6
DLG3
STAMBP
FARSB
BSDC1
ATF4
YTHDC1
CLDN7
LDAH
TMEM183A
STX10
IER2
DCAKD
CETN3
PPP1R12A
FOSB
LRP10
ESCO1
FANCD2
SPINT2
DNAJA3
GLS
FOS
NARF
SP4
RGL2
GMFB
C3orf14
NCBP2AS2
NCBP2
GNA13
SPIN1
SETD1B
EIF2S2
AARS1
RHOF
SPTSSB
FAM86B2
YJU2
RPS21
XIAP
NAV1
DSN1
RAB1A
GMPS
PSMA3
HECTD2
CLN3
APOBR
SLC25A39
STXBP4
COX11
WWOX
PTPN23
HSP90AB1
CYB561
TSEN34
MBOAT7