ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: CLOCK | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◢ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◣ CLOCK: STRING

SERPINE1
NMRK1
CCK
PNPLA2
THPO
ANGPTL2
PER1
CRY2
PER2
AGAP11
ADIRF
DBP
CRY1
NKIRAS1
NR1D2
GET4
CIART
PLD6
TEF
KAT5
MARCHF9
CDK4
NR6A1
CLUAP1
C16orf90
RALGDS
FRG2C
NR1D1
TRAPPC6A
BLOC1S3
DUX4
NPTN
RORC
PIP4P1
SNRPE
BCAR1
ANKRD12
LAMP1
NOL8
CENPP
MAMDC2
EIF5A2
RAD9A
MTRNR2L1
OSGIN1
SLC35A5
ATG3
PFDN4
YPEL5
LRRC56
TMEM116
ERP29
COMMD8
PER3
HRAS
PTBP1
KHDRBS1
BCAS3
MAPK6
PLEKHF2
RNF43
CLN6
DOCK6
IGSF8
HPS5
GTF2H1
CLCN7
HOXC13
TXNIP
CCDC200
TRIM37
CSDE1
LNX1
FAM76A
PIK3IP1
HOOK2
GTF3A
DDX5
CEP95
FRG2
ERCC6L2
ELAVL3
TRPV4
OSGEP
APEX1
MTHFR
CLCN6
ZNF292
STX4
RBM39
AVPI1
UVRAG
ZNF718
SLC20A1
DHX35
LRCOL1
ARFGEF2
ARRDC4
USP32
ZNF595
VPS11
UBE2B
CDKL3
EMC2
VPS26A
RNASEK
C17orf49
MAP2K7
HIF1A
P2RX2
AP5Z1
DAZAP2
SPG21
ISOC2
MAP1LC3B
FBXO31
CDK12
ILF3
FIBP
CCDC85B
PLEKHG5
DDX42
CCDC47
FNIP1
PTEN
KLLN
PPP1R3C
MUC3A
S100A13
CHTOP
RHOF
MTHFD1L
WASHC2A
NPR3
HES4
APPBP2
SNRPA
C19orf54
DENR
PHKG2
LRATD2
SLC25A13
INAFM1
SERF2
KMT2E
CAMKK1
RPEL1
MICALL2
PPM1D
TRAPPC2L
GALNS
RFESD
COL23A1
AP1S1
PNPLA7
MRPL41
G3BP1
EIF3B
PMS2
MRPL40
HIRA
AIMP2
PC
FAM117B
WASHC2C
ZNRF2
RPUSD4
FAM118B
CEBPB
SLC33A1
ZNF331
MORF4L1
UBAP2L
C1orf43
IFRD2
ALG13
TNNI3
CREBRF
GMFB
CCDC24
NUDCD3
SRP54
UTP18
SPNS1
MBTD1
CEP63
ANAPC13
NCOA3
WDR62
THAP8
SLC35B2
PRORP
PPP2R3C
PRDX6
BCAM
MAPK1IP1L
NME1
BRIP1
TMEM185B
B3GNTL1
PRKAR1A
TIMM22
ZNF438
DPP3
PLEC
SDR39U1
SRSF1
CPEB1
HBP1
LSM12
G6PC3
ZNF263
GTF2A1
RCCD1
KDM6B
TRMO
XPOT
ATP6V1H
ADNP2
RRAGC
TRIQK
CSTF1
AURKA
HMGB2
TOB1
COQ10B
NFX1
FLCN
HERC3
GSK3B
SLC25A36
TTYH1
GYG1
LRFN4
SRSF5
GABARAPL2
CHFR
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
CLTC
TMEM18
USP36
GBE1
IP6K1
TUBD1
RPS6KB1
ZMYND8
TPD52L2
ABHD16B
YDJC
CCDC116
PPP1R3D
KLF1
GCDH
FAM217B
TCF25
FAM214A
LYRM9
UBE2Q1
ABHD11
CCNL1
C2CD4D
ARRDC3
SPATA25
NEURL2
CTSA
SYNGAP1
DACT3
CUTA
BCAS4
RAB17
ZBTB37
MEA1
ZNF706
YBX2
DHPS
PDE12
PTCD3
POLR1A
PUM2
CTTN
NRAS
EPM2A
COX14
SNAP29
PI4KA
SRCAP
LOC730183
SENP8
MYO9A
SEPTIN2
NAPRT
MROH6
HDLBP
GZF1
CLN3
APOBR
MADD
SCAF11
TLE6
SUMF1
STAT6
THAP5
DNAJB9
RNF13
PAF1
MED29
KDM4C
GGA2
MARCHF8
ZNF687
NBN
NTN5
HNRNPF
ZC3H4
CNOT3
SLC2A4RG
LIME1
EIF1
RMI1
HNRNPK
FAM214B
BHLHE40
EED
SLC25A26
FZD1
SPTBN4
BLVRB
BCLAF1
NAA50
ATP6V1A
TMEM187
HCFC1
MYL12A
THNSL1
RPS11
ZZZ3
POLI
PPAT
PAICS
HEXA
TBC1D17
AKT1S1
RRAGB
CENPN
COMMD9
PPFIA4
HSF2
SPAAR
COL6A1
TBCEL-TECTA
TBCEL
RMND1
MVB12A
ARMT1
SLC25A39
PSMD6
H2BC12
H2AC12
OPRL1
NTMT1
NFYC
ARIH1
UCP2
WDR74
TCERG1
EIF4B
CHMP2B
EPB41L4B
MAN2B2
SULF2
MED13
ZCWPW1
MRPS23
MEPCE
CD164
DPH2
B4GALT2
ATP6V0B
UNC13D
SLC35C2
SETD1A
LFNG
FNBP4
RFX3
UNK
PARD6B
NOP14
GRK4
SNX5
MGME1
MTCH2
GALR1
TM9SF1
DHX40
SLC3A2
TMEM141
RIMBP2
CCDC183
C6orf62
CD55
WTAP
SOD2
BRPF1
LAMC1
CDIPT
SLC25A25
NAIF1
DGAT2
TENT5B
ZNF335
TRIM8
CASC3
YEATS4
HNRNPA2B1
CBX3
TIPARP
SRP9
ISG20
EXOSC5
BCKDHA
ATG101
MCM7
AP4M1
LARP1
BAX
LKAAEAR1
LCN12
C8G
CIPC
RNF223
DHODH
HNRNPH2
GLA
KLF11
H4C14
RPSA
PRKCI
INO80
GABPB2
CFAP251
TRIB1
HDAC4
EIF4A1
TUFT1
COLEC11
CAP1
CLN8
CCDC107
SPPL3
PPP4R3B
CNNM2
VPS33A
ESYT3
POLR1D
LNX2
ILVBL
MAPK15
ITGB1
RBBP5
ZFP91
LPXN
SLC49A4
HSPBAP1
PDXDC1
MAL2
KAT7
CLK1
SLC35A4
APBB3
CTDSP2
ADK
TMEM53
SULT1A4
SULT1A3
BOLA2
ARMH1
PNO1
ENSA
CENPA
DDX3X
TUBA1C
YARS1
S100PBP
ERCC1
ZHX2
MOCS3
MAX
DPM1
BCL9L
SREK1
STXBP4
PHF23
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
TBX2
MZF1
ZBTB7B
EMP3
CCDC114
NAPA
SLC43A2
ZFP1
PCBP1
RBBP6
WDR89
TADA3
ARPC4-TTLL3
ARPC4
ADGRB1
DDX59
SKA2
PRR11
YWHAZ
NR1H2
XRN2
VMP1
TBC1D13
PTRH2
IGSF21
SLC25A24
PPM1A
SLC39A6
ELP2
UCKL1
TRIP6
THRAP3
L3HYPDH
JKAMP
EIF4G1
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
TMCC1
LAMTOR4
FBXO46
EIF5
SLC25A11
RNF167
RPS29
HEXIM2
TUBA1B
RNMT
FAM210A
PRC1
ECH1
PPP1R13L
POLR1G
STAM2
FBXO5
SPATA2
PEX14
DFFA
TJP2
PDP2
NDUFS6
MRPL36
STMN1
LUC7L2
KPNA2
HES1
MLH1
EPM2AIP1
SGO1
SLX1B
SLX1A
COPS7A
BOLA2B
SMARCD2
TBC1D15
UBR5
CDK19
BCL6
AMD1
PIGO
ASPH
SON
GART
PDCD6IP
SPAG9
AMDHD2
PTP4A1
ZNF778
PCBP3
MIOX
ADM2
ZNF219
TMEM253
BCAS1
PPIA
PRKDC
MCM4
STX6
EIF3E
GPBP1
GLS
DDX43
NPM1
KLF10
ANAPC7
GREB1
NSUN3
DHFR2
MTRNR2L8
TRIM59
ATOH8
COX19
PACSIN3
H3-3B
SLC25A19
FAM53C
CSRNP1
CDC25C
TRMT112
SLBP
PRDX5
USP9X
HNRNPA1
CBX5
TARDBP
TATDN2
HIRIP3
SLC35F6
UBQLN1
SCAF1
RRAS
PPP2R5C
USP48
CHKA
RNFT1
PABPC1
H4C15
ATIC
AEN
RBM3
PSME3
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
RTN4RL1
DPH1
RLF
PAK1IP1
JUNB
C6orf52
ZFP62
ATF7-NPFF
ATF7
FBXO33
OSGIN2
DNAJB1
ERGIC2
ALDOA
ADGRE5
TMEM88
NAA38
DDX23
CYB5D1
TSTD2
NCBP1
UQCRC2
RIPK2
PCNT
C21orf58
CACYBP
SEPTIN9
IREB2
STX16
BOLA2-SMG1P6
DEF6
PCIF1
MCCC1
SNX16
ARL4A
TFAP4
TMED10
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
GCLC
WDR6
ZNF217
PES1
DCBLD1
PGP
BRICD5
PPP1R15A
PLEKHA4
POLR2J3
ZNF384
SRRT
LTV1
FCMR
SMG9
RNF31
PSME2
PARP10
FAF1
FAF2
SPTSSB
DUSP1
ARF6
SERINC3
PMVK
PHF12
GOLIM4
SLC12A4
ELOB
BANP
OGFOD2
ARL6IP4
U2AF2
PLEKHG2
MBNL1
TFAP2C
SLC35B1
TOP3A
SMCR8
TANC2
SETDB1
KIFC1
RCE1
MXD3
KHSRP
TRA2B
CHMP3
STK35
TIMM44
HSPH1
PSMC5
FTSJ3
AHI1
TAGLN2
HNRNPD
CYC1
GMNN
TIPIN
TEX14
RAD51C
YIF1A
TMEM151A
CAD
PIK3R3
CCDC6
ZNF24
TREX1
LAMTOR1
KIAA0895
C1orf54
APH1A
ANLN
METTL1
EEF1AKMT3
CYP27B1
METTL23
JMJD6
DNAJB5
DNAJB12
CCDC186
ZFP36
SYT1
SRSF4
PIGW
OSBPL1A
MYO19
SOCS5
RITA1
KPNA3
DDX54
ZNHIT1
USP17L22
USP17L20
TSPAN31
PLOD3
AGAP2
SPATA17
RRP9
PARP3
GPATCH2
NOP58
HNRNPH1
MEF2D
SIRT4
PNISR
DUS3L
EGR1
PPIL3
NPC1
NIF3L1
NCAPD2
MRPL51
RPS19
DVL2
DOK7
SYNRG
RABGGTA
PNPO
SLC25A10
PPP1R15B
JADE2
RHOD
DDX6
TET3
PPP1R10
MRPS18B
AIG1
FAM86B1
TMEM251
MOAP1
PRMT2
TOR1AIP2
TOR1AIP1
TNFRSF12A
THOC6
SUPV3L1
HCFC1R1
DDIT4
CLDN6
HNRNPA0
GNAS
PAIP2
KMT5C
GOLGA5
CIC
CANX
C17orf58
DYNC2I2
SERTAD3
SARAF
LYRM1
IQSEC1
DCUN1D3
CC2D1B
ZC3H11A
ZBED6
SESN1
NUP188
DOLK
CEP57L1
SENP2
AP1G1
CHD1
SPATC1L
WDR97
MAF1
ZAR1L
SF3B4
LRPPRC
BRCA2
ALOXE3
COPS3
IRF2BPL
TMEM184A
NAB2
MED1
SOX12
HIPK1
BRD2
TAX1BP3
KRT80
HSF1
EMC6
BOP1
TXNRD1
RPL27
PPP5D1
CALM3
PARN
BFAR
PDIA4
UBE2M
GABPB1
CHMP2A
NCL
ZNF408
GPRC5A
DARS1
ARHGAP1
PDPR
OR2B11
SGK3
LIN54
SLC35E2A
C3orf14
GNB2
DCLRE1B
ARF3
AP4B1
ORC4
MBD5
FMC1-LUC7L2
FMC1
ZNF57
SMC4
MDM2
IFT80
TSPAN4
POLR2L
AMOTL2
KRT8
C15orf39
C14orf93
DUSP7
TBL1X
ESRP2
RPL10
RBM8A
ZNF286A
CFLAR
TSPYL1
ST20-MTHFS
SLC30A1
PRKAG2
DSE
CBLL1
TANK
PMEPA1
MICU1
ZBTB8OS
RBBP4
NAT10
DOP1B
PLK4
MBTPS1
PKNOX1
NOL11
C1orf174
ETF1
DMTF1
C5orf51
PPP4R3A
LRP10
DUSP28
ANKMY1
STAG2
TFDP1
GSTP1
TOR3A
TAF9
RAD17
AK6
UBE2T
SRSF7
RSL1D1
FSCN2
ATP6V1G1
MTMR14
GRHL2
CEP152
ATP5MC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
AXDND1
ANKFY1
ZBTB10
ZBTB21
UBALD1
MAT2A
BAHCC1
FUBP1
DNAJB4
SCN5A
CD37
UBC
WDR81
PSMD9
MFSD4B
HPD
FZD5
TRIM52
ICAM5
ICAM4
H3C15
H3C14
H2AC19
H2AC18
GABPA
ATP5PF
NDUFAF5