ChIP-Atlas: Target genes

Potential target genes for CLOCK

Query protein: CLOCK
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457296 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CLOCK's Target genes

◢ CLOCK: Average

◢ SRX10475134: K-562

◢ SRX10475135: K-562

◢ SRX359928: LoVo

◢ SRX5457295: MCF-7

◣ SRX5457296: MCF-7

◢ SRX5457524: MCF-7

◢ SRX5457525: MCF-7

◢ SRX1091022: NOMO-1

◢ SRX1091025: NOMO-1

◢ SRX1091030: NOMO-1

◢ SRX1091036: THP-1

◢ SRX1091039: THP-1

◢ SRX1393087: U2OS

◢ SRX1393088: U2OS

◢ SRX235054: U2OS

◢ CLOCK: STRING

CIART
PER1
CRY2
DBP
PER2
AGAP11
ADIRF
CRY1
NR6A1
PFDN4
DUX4
TEF
RORC
NR1D1
BCAS3
TRAPPC6A
BLOC1S3
CLUAP1
C16orf90
SNRPE
FZD1
KAT5
PIP4P1
PLEKHF2
FRG2C
YPEL5
LNX1
NPTN
PLD6
MAP1LC3B
FBXO31
RALGDS
GET4
OSGIN1
TXNIP
CTDSP2
PTBP1
SLC20A1
IGSF8
PDXDC1
NOL8
CENPP
RNF43
EIF5A2
MARCHF9
CDK4
FAM76A
TRPV4
LRRC56
HRAS
TRIM37
BAHCC1
MAPK6
CDIPT
MYL12A
CLN6
DOCK6
LRCOL1
P2RX2
BCAR1
SLC25A36
PLEKHG2
PPM1D
CEP63
ANAPC13
TXNRD1
RHOF
ZMYND8
RFESD
PMS2
AIMP2
CTDSP1
MICALL2
CTTN
UBE2B
CDKL3
NPR3
BMP7
PTCD3
POLR1A
TNRC18
LOC100129484
UVRAG
HOOK2
ARRDC4
CCDC24
CEBPB
UTP18
MBTD1
BCAS4
GTF2A1
PNPLA7
MRPL41
CSTF1
AURKA
DDX5
CEP95
FRG2
AVPI1
ANKRD12
USP32
PRKCI
MOCS3
DPM1
BCAS1
PLEKHG5
SENP8
MYO9A
TADA3
ARPC4-TTLL3
ARPC4
GSTP1
DPP3
FAM117B
TMEM116
ERP29
CSDE1
SLC35E2B
TMEM94
MAP2K7
LYRM9
SRP54
TUFT1
CENPN
NUDCD3
STX4
PHKG2
TIPARP
GNB2
DDX42
CCDC47
PPP1R13L
POLR1G
IFRD2
TNNI3
FLCN
PNO1
GMFB
SLC35E2A
IGFL4
BRIP1
BCL6
RNFT1
COX14
PC
ATG101
TEX14
RAD51C
EIF3B
FAM53C
CDC25C
RNASEK
C17orf49
LRPPRC
EED
DCLRE1B
AP4B1
PRORP
PPP2R3C
SGK3
TMEM260
SLC2A4RG
LIME1
HIF1A
VMP1
PTRH2
ISOC2
TIMM22
PTEN
KLLN
MEA1
PIK3IP1
MADD
RAD9A
TBC1D17
AKT1S1
UQCRC2
GZF1
NBPF1
PARD6B
CCDC200
OSGEP
APEX1
ARID3B
RCCD1
BCAM
MVB12A
GIPR
GABARAPL2
MRPS23
GREB1
HSPH1
ELAVL3
EMC2
NME1
DACT3
TRIB1
RBBP5
SPTBN4
BLVRB
H2BC6
GRHL2
MBNL1
SPATA17
GPATCH2
EIF4A1
PAK1IP1
C6orf52
SPAG9
PPP1R3C
PSMD6
C6orf62
ESYT3
RHOD
AP1S1
SELENOW
NOCT
CHFR
STX16
PDE12
MTMR14
HBP1
TATDN2
SSBP2
TENT5B
RNF223
APPBP2
SLC25A19
RAB3D
TMEM205
CCDC159
TUBD1
RPS6KB1
UNC13D
CD55
POLG
KHSRP
CLTC
EIF3E
RPEL1
CCT5
ATPSCKMT
ZBTB37
SLC35A4
APBB3
CENPA
ZNF778
FAF1
TRMT12
NCOA3
TCERG1
TMEM53
ARMH1
ATF7-NPFF
ATF7
S100A11
STK35
ILF3
HPS5
GTF2H1
HES4
SLC12A4
C3orf14
VPS11
FNIP1
ZNRF2
ALDOA
FAM214B
ZNF687
ZHX2
MAN2A1
RNF13
ATP2A3
KMT5A
TRIP6
ARFGEF2
EXOSC5
BCKDHA
WDR62
THAP8
MCCC1
NR1H3
ACP2
SIDT1
KHDRBS1
NRAS
SULT1A4
SULT1A3
BOLA2
RPS19
SLC35A5
ATG3
HSF2
SLC49A4
HSPBAP1
NPM1
SLC34A3
RNF224
CYSRT1
KDM6B
DHX40
RBBP8NL
PES1
DGKZ
BCAS2
NPW
CCDC107
SLC35B1
WDR74
RBBP6
SKA2
PRR11
RPS29
PPP1R10
MRPS18B
SULF2
ACVR2B
UBAP2L
C1orf43
UBFD1
EARS2
WDPCP
MDH1
COA1
DNAJB5
PMVK
UCKL1
ZFP62
C1orf174
NR1H2
STAM2
AGFG2
SYNGAP1
CUTA
PLEC
KMT2E
H3C15
H3C14
H2AC19
H2AC18
NKIRAS1
NR1D2
LAMP1
MAMDC2
MTRNR2L1
COMMD8
PER3
CLCN7
HOXC13
GTF3A
ERCC6L2
MTHFR
CLCN6
ZNF292
RBM39
ZNF718
DHX35
ZNF595
VPS26A
AP5Z1
DAZAP2
SPG21
CDK12
FIBP
CCDC85B
MUC3A
S100A13
CHTOP
MTHFD1L
WASHC2A
SNRPA
C19orf54
DENR
LRATD2
SLC25A13
INAFM1
SERF2
CAMKK1
TRAPPC2L
GALNS
COL23A1
G3BP1
MRPL40
HIRA
WASHC2C
RPUSD4
FAM118B
SLC33A1
ZNF331
MORF4L1
ALG13
CREBRF
SPNS1
SLC35B2
PRDX6
MAPK1IP1L
TMEM185B
B3GNTL1
PRKAR1A
ZNF438
SDR39U1
SRSF1
CPEB1
LSM12
G6PC3
ZNF263
TRMO
XPOT
ATP6V1H
ADNP2
RRAGC
TRIQK
HMGB2
TOB1
COQ10B
NFX1
HERC3
GSK3B
TTYH1
GYG1
LRFN4
SRSF5
MAP4K1
EIF3K
TKTL1
TEX28
ATXN2
PRPF3
THOC7
ATXN7
PSMD5
TMEM18
USP36
GBE1
IP6K1
TPD52L2
ABHD16B
YDJC
CCDC116
PPP1R3D
KLF1
GCDH
FAM217B
TCF25
FAM214A
UBE2Q1
ABHD11
CCNL1
C2CD4D
ARRDC3
SPATA25
NEURL2
CTSA
RAB17
ZNF706
YBX2
DHPS
PUM2
EPM2A
SNAP29
PI4KA
SRCAP
LOC730183
SEPTIN2
NAPRT
MROH6
HDLBP
CLN3
APOBR
SCAF11
TLE6
SUMF1
STAT6
THAP5
DNAJB9
PAF1
MED29
KDM4C
GGA2
MARCHF8
NBN
NTN5
HNRNPF
ZC3H4
CNOT3
EIF1
RMI1
HNRNPK
BHLHE40
SLC25A26
BCLAF1
NAA50
ATP6V1A
TMEM187
HCFC1
THNSL1
RPS11
ZZZ3
POLI
PPAT
PAICS
HEXA
RRAGB
COMMD9
PPFIA4
SPAAR
COL6A1
TBCEL-TECTA
TBCEL
RMND1
ARMT1
SLC25A39
H2BC12
H2AC12
OPRL1
NTMT1
NFYC
ARIH1
UCP2
EIF4B
CHMP2B
EPB41L4B
MAN2B2
MED13
ZCWPW1
MEPCE
CD164
DPH2
B4GALT2
ATP6V0B
SLC35C2
SETD1A
LFNG
FNBP4
RFX3
UNK
NOP14
GRK4
SNX5
MGME1
MTCH2
GALR1
TM9SF1
SLC3A2
TMEM141
RIMBP2
CCDC183
WTAP
SOD2
BRPF1
LAMC1
SLC25A25
NAIF1
DGAT2
ZNF335
TRIM8
CASC3
YEATS4
HNRNPA2B1
CBX3
SRP9
ISG20
MCM7
AP4M1
LARP1
BAX
LKAAEAR1
LCN12
C8G
CIPC
DHODH
HNRNPH2
GLA
KLF11
H4C14
RPSA
INO80
GABPB2
CFAP251
HDAC4
COLEC11
CAP1
CLN8
SPPL3
PPP4R3B
CNNM2
VPS33A
POLR1D
LNX2
ILVBL
MAPK15
ITGB1
ZFP91
LPXN
MAL2
KAT7
CLK1
ADK
ENSA
DDX3X
TUBA1C
YARS1
S100PBP
ERCC1
MAX
BCL9L
SREK1
STXBP4
PHF23
COX11
RNF139
KLHL12
SYNCRIP
MMADHC
RAD50
TBX2
MZF1
ZBTB7B
EMP3
CCDC114
NAPA
SLC43A2
ZFP1
PCBP1
WDR89
ADGRB1
DDX59
YWHAZ
XRN2
TBC1D13
IGSF21
SLC25A24
PPM1A
SLC39A6
ELP2
THRAP3
L3HYPDH
JKAMP
EIF4G1
EIF4A2
CALM2
DLX4
CYB561
CD2BP2
TMCC1
LAMTOR4
FBXO46
EIF5
SLC25A11
RNF167
HEXIM2
TUBA1B
RNMT
FAM210A
PRC1
ECH1
FBXO5
SPATA2
PEX14
DFFA
TJP2
PDP2
NDUFS6
MRPL36
STMN1
LUC7L2
KPNA2
HES1
MLH1
EPM2AIP1
SGO1
SLX1B
SLX1A
COPS7A
BOLA2B
SMARCD2
TBC1D15
UBR5
CDK19
AMD1
PIGO
ASPH
SON
GART
PDCD6IP
AMDHD2
PTP4A1
PCBP3
MIOX
ADM2
ZNF219
TMEM253
PPIA
PRKDC
MCM4
STX6
GPBP1
GLS
DDX43
KLF10
ANAPC7
NSUN3
DHFR2
MTRNR2L8
TRIM59
ATOH8
COX19
PACSIN3
H3-3B
CSRNP1
TRMT112
SLBP
PRDX5
USP9X
HNRNPA1
CBX5
TARDBP
HIRIP3
SLC35F6
UBQLN1
SCAF1
RRAS
PPP2R5C
USP48
CHKA
PABPC1
H4C15
ATIC
AEN
RBM3
PSME3
HNRNPC
NAMPT
MTDH
FBXW4
TUBGCP5
TRA2A
FBXL18
MED26
RTN4RL1
DPH1
RLF
JUNB
FBXO33
OSGIN2
DNAJB1
ERGIC2
ADGRE5
TMEM88
NAA38
DDX23
CYB5D1
TSTD2
NCBP1
RIPK2
PCNT
C21orf58
CACYBP
SEPTIN9
IREB2
BOLA2-SMG1P6
DEF6
PCIF1
SNX16
ARL4A
TFAP4
TMED10
MYL6
LRCH4
FBXO24
CCDC86
CYTH2
GCLC
WDR6
ZNF217
DCBLD1
PGP
BRICD5
PPP1R15A
PLEKHA4
POLR2J3
ZNF384
SRRT
LTV1
FCMR
SMG9
RNF31
PSME2
PARP10
FAF2
SPTSSB
DUSP1
ARF6
SERINC3
PHF12
GOLIM4
ELOB
BANP
OGFOD2
ARL6IP4
U2AF2
TFAP2C
TOP3A
SMCR8
TANC2
SETDB1
KIFC1
RCE1
MXD3
TRA2B
CHMP3
TIMM44
PSMC5
FTSJ3
AHI1
TAGLN2
HNRNPD
CYC1
GMNN
TIPIN
YIF1A
TMEM151A
CAD
PIK3R3
CCDC6
ZNF24
TREX1
LAMTOR1
KIAA0895
C1orf54
APH1A
ANLN
METTL1
EEF1AKMT3
CYP27B1
METTL23
JMJD6
DNAJB12
CCDC186
ZFP36
SYT1
SRSF4
PIGW
OSBPL1A
MYO19
SOCS5
RITA1
KPNA3
DDX54
ZNHIT1
USP17L22
USP17L20
TSPAN31
PLOD3
AGAP2
RRP9
PARP3
NOP58
HNRNPH1
MEF2D
SIRT4
PNISR
DUS3L
EGR1
PPIL3
NPC1
NIF3L1
NCAPD2
MRPL51
DVL2
DOK7
SYNRG
RABGGTA
PNPO
SLC25A10
PPP1R15B
JADE2
DDX6
TET3
AIG1
FAM86B1
TMEM251
MOAP1
PRMT2
TOR1AIP2
TOR1AIP1
TNFRSF12A
THOC6
SUPV3L1
HCFC1R1
DDIT4
CLDN6
HNRNPA0
GNAS
PAIP2
KMT5C
GOLGA5
CIC
CANX
C17orf58
DYNC2I2
SERTAD3
SARAF
LYRM1
IQSEC1
DCUN1D3
CC2D1B
ZC3H11A
ZBED6
SESN1
NUP188
DOLK
CEP57L1
SENP2
AP1G1
CHD1
SPATC1L
SERPINE1
WDR97
MAF1
ZAR1L
SF3B4
BRCA2
ALOXE3
COPS3
IRF2BPL
TMEM184A
NAB2
MED1
SOX12
HIPK1
BRD2
TAX1BP3
KRT80
HSF1
EMC6
BOP1
RPL27
PPP5D1
CALM3
PARN
BFAR
PDIA4
UBE2M
GABPB1
CHMP2A
NCL
ZNF408
GPRC5A
DARS1
ARHGAP1
PDPR
OR2B11
LIN54
ARF3
ORC4
MBD5
FMC1-LUC7L2
FMC1
ZNF57
SMC4
MDM2
IFT80
TSPAN4
POLR2L
AMOTL2
KRT8
C15orf39
C14orf93
DUSP7
TBL1X
ESRP2
RPL10
RBM8A
ZNF286A
CFLAR
TSPYL1
ST20-MTHFS
SLC30A1
PRKAG2
DSE
CBLL1
TANK
PMEPA1
MICU1
ZBTB8OS
RBBP4
NAT10
DOP1B
PLK4
MBTPS1
PKNOX1
NOL11
ETF1
DMTF1
C5orf51
PPP4R3A
LRP10
DUSP28
ANKMY1