ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13466113 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◣ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

SPATC1L
ADAMTSL1
TNFRSF19
SP2
EVI5L
UNK
UCKL1
DNM2
CLPB
FAP
H4C3
VPS50
HEPACAM2
H4C11
DDX49
COPE
IFRD2
FEM1A
KATNB1
BOD1
RFX1
PHF12
NEBL
H4C15
H4C14
RBBP5
SUCLG1
CALCOCO1
FBXL19
THRAP3
TMEM115
RAB5B
AP2S1
ING4
SP1
H4C2
TEPSIN
NDUFAF8
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPP1R12B
TCEA2
RWDD1
IFTAP
HIKESHI
MAPKAPK5
GALM
CHMP4B
POLR3F
DZANK1
TBL1X
WDPCP
MDH1
YJU2
PES1
DFFA
PAFAH2
WDR74
KHSRP
SCNM1
LYSMD1
PRCC
CALR3
C19orf44
CRTC2
SLX1B
SLX1A
BOLA2B
BOLA2
PAK1IP1
C6orf52
TSN
MMACHC
CCDC163
NUDCD1
CIC
TSC2
NTHL1
SF3B6
FAM228B
MTOR
ELOC
GSPT1
ZNF547
TRAPPC2B
CCAR2
PHB
SUPV3L1
H2BC4
H2AC6
SLC25A25
NAIF1
NUP205
NCLN
TSNAXIP1
RANBP10
POLDIP3
SMPD3
DDX23
C1orf159
ANKHD1-EIF4EBP3
ANKHD1
AURKAIP1
RPL32
SP5
RNASEH2A
GPR108
ST3GAL2
ZFYVE1
C16orf91
BOLA2-SMG1P6
UBQLN4
LAMTOR2
EHF
SNX17
EIF2B4
TRDMT1
RPS20
BMF
MRPL24
VIPAS39
AHSA1
SART3
ISCU
BANP
TSSC4
TOM1L2
DRC3
LRCH4
FBXO24
TMEM208
LRRC29
ORMDL3
ZNF17
SYMPK
FOXA3
VCPIP1
C8orf44-SGK3
BUB1B
HRCT1
GPR137
NUP107
CYCS
INVS
ERP44
KBTBD6
LSG1
SIRT4
GTF2H4
HNRNPC
G3BP1
E2F4
STAM
UFSP2
METTL3
OSBP
H4C12
SEC11C
NPRL2
CYB561D2
ZNF225
NLK
CCDC146
NR6A1
KHDC4
SIRT2
NFKBIB
EIF2AK3
PNKD
AAMP
PPRC1
PRR14
ZNF548
ZNF691
RPS7
PEMT
LARS1
RPS3
DDX39B
SRD5A1
ZNF383
CNIH4
TMTC3
CEP290
SUPT7L
SLC4A1AP
ACTR1A
MICOS13
HSD11B1L
CDK5RAP2
SUFU
CLN3
TRMO
MED24
TRAF7
DSTYK
NUCB1
MTRNR2L2
MRPL53
COMMD9
RPIA
ISY1-RAB43
ISY1
EXOC4
ZNF268
CACTIN
UBR2
SPSB3
STT3A
LMAN2
MCAT
PIN4
TIMM21
FBXO15
NFIB
NUF2
ATP5F1B
ZNF56
RTRAF
RTF2
SCAF1
ZC3H10
NDUFS3
KBTBD4
OAZ3
MRPL9
WDR46
PFDN6
UBE2I
TFPT
PRPF31
ZNF140
SLX4IP
PEAK1
HMG20A
DDX41
MTRNR2L8
CCDC90B
COMMD1
CCT4
AK2
COX16
TTC33
TGIF1
EXD2
GATB
INTS9
HMBOX1
SSR3
UBC
ING3
PNN
FLAD1
ZNF417
ZNF576
IRGQ
EFTUD2
CCDC103
H2AC19
H2AC18
ZSWIM3
ACOT8
NDUFC2-KCTD14
NDUFC2
VTI1B
NVL
MAP2K3
CELF3
VWA5A
KRT23
ZNF143
FASTKD1
HNRNPL
UFD1
CDC45
MED27
ZNF337
CCDC124
ZNF608
TMEM94
NME1-NME2
NME1
PHB2
BTRC
FAM168A
GTF3C3
SEL1L
ZNF500
ZNF776
LAMP1
SLC35B1
TMEM160
HEXIM2
DHX33
AP1G1
RPL27
ZNF384
RBL1
SNX16
SLC8A1
PSMB6
ZMAT2
DCP1B
KRT15
NDUFB3
FAM126B
SLC25A19
TTI2
TCERG1
NUDT13
PXMP2
POLE
TMEM60
PHTF2
SPHK2
RPL18
CCP110
PSMD11
TSNAX
RPS13
CIAO2A
FARSB
ANAPC5
COX7C
JOSD2
TRIP4
C19orf53
RANBP2
LIN37
RPS27A
CLHC1
RABAC1
ZSCAN5A
RNF121
LOC100133315
GBA
BUB3
MARS1
ARHGAP9
SMG5
ZNF444
TBC1D10B
MYLPF
SEC13
DLGAP1
GABPB2
H4C5
TMEM242
RPS23
ATP6AP1L
TBL3
WDR83OS
WDR83
FDPS
SLC35E2B
NDC80
METTL4
PRORP
PPP2R3C
TM9SF4
C12orf43
ZNF565
ZNF146
MRPL44
ZNF687
SCRIB
ZNF335
EIF3F
SRSF11
LRRC40
RPS6KB2
EXOSC5
BCKDHA
MRPL28
METTL26
ZNF552
GEMIN6
DYNC1I2
NFATC2IP
SPC25
FOS
SAP30BP
RECQL5
FAM156B
FAM156A
HDAC9
GOSR2
SUGP1
MAU2
PNPLA6
REXO1
PIGL
EIF4A1
ZC3H6
NCDN
KIAA0319L
CDK8
RPL29
DVL2
UBAC1
STIP1
IPO13
CTU1
TPRKB
ZNF584
ZNF419
RANGAP1
MAMSTR
FOXP2
WBP2
PRRG2
NOSIP
PANK4
MITD1
HSPA9
SART1
ATG4C
ZNF165
MED6
CCDC174
DCAF7
CGGBP1
RARB
C3orf38
ATXN2L
STK36
RNF25
TMEM109
SNAPC3
IFI44L
DDR2
ZNF235
CAND1
GET3
SHPK
CTNS
SMAD3
SREK1IP1
CWC27
MPV17L2
CSTF1
AURKA
ZBTB45
PEX26
GABARAP
ZSCAN22
RAB11B
AHCYL2
PCBP1
MRPS7
GGA3
C1orf109
CD2BP2
MTMR9
NDUFAB1
NDUFA2
IK
C19orf48
FBXW9
MRPS18C
HELQ
FBXW11
SLMAP
HIRIP3
SEC61B
ALG2
CTDP1
RPL18A
ZNF688
TAF6
PNISR
IDH3B
DESI2
CNPY4
ASB4
ABCB8
ALKBH7
DHX8
NR1H3
ACP2
PPIL3
NIF3L1
RPL9
LIAS
USP30
RPS12
SMG8
RPL21
BMERB1
NMNAT1
LZIC
AMOTL2
SF3B3
COG4
VPS4B
UBQLN1
CEP128
SSBP1
UTP11
CWC22
GSK3A
NDUFAF5
ESF1
TMED10
NSA2
GFM2
SESN1
CEP57L1
GORAB
POLR2E
KMT2B
CENPA
RFC4
PTBP1
DPH2
CDKN2D
KRR1
NMT1
DCAKD
VPS25
SLC39A9
ERH
ZNF112
NGDN
EHMT2
CLEC16A
C2
ZFPL1
CDCA5
SPNS1
HBP1
PTCD3
POLR1A
MVB12A
C10orf143
PPP1R12C
COPS7A
SF3B5
UTP3
NUP214
NOLC1
C12orf73
RBM42
LYRM4
FARS2
RPS26
NDUFB5
MRPL47
XPNPEP3
ST13
TPGS1
PRKCI
HSPA13
BCAS2
RNF187
CRADD
C12orf57
BET1
ZNF420
SPAG7
RBM6
N4BP2L2
GTPBP3
B4GALT5
TRMT2A
RANBP1
DARS2
CENPL
EMC4
LTA4H
TACO1
ZNF76
TIMM13
SLC4A2
RPA2
NOP53
CREM
CHD8
CDK5
PPP6R1
RPGRIP1L
FTO
UQCRH
LRRC41
CXXC1
CNOT1
SNRPB
WASF1
RNF5
HEXIM1
CDC40
AGPAT1
ALG10B
BABAM1
MRPS23
CSTF2T
GSTO2
ZRANB2
EIF2S3
SNRPD3
GUCD1
RHBDD3
MED11
EWSR1
SMARCAL1
NRL
DCAF11
PARP2
GPKOW
EIF1AD
BANF1
ZNF221
OXSR1
H2BC21
H2AC21
H2AC20
MRPL1
LENG1
ZNF2
SERP1
PPWD1
EIF2A
CENPK
RBM28
MRM3
GLOD4
SNRPE
NRDE2
GID4
ATPAF2
CAPN15
THYN1
GRWD1
ACAD8
CWF19L1
CCDC59
TTC31
CCDC142
ADO
ZMAT5
UQCR10
RACGAP1
PHF5A
GBF1
CLTC
ACO2
BAG6
ZNF850
POLG2
ICE1
STAM2
MED20
BYSL
BLOC1S1
PABPN1
MAF1
SEC24C
VPS52
RPS18
PAN2
TXNL4B
DHX38
DOLPP1
PPIG
CEP162
ZDHHC5
TMEM63C
PAF1
RPF1
SLC25A42
MOCS3
DPM1
RBM15
AP2B1
MPDU1
LOC100996842
SF3A3
RGPD2
RGPD1
MTRNR2L9
THOC6
HCFC1R1
MRPL21
IGHMBP2
STX16
INTS1
NDUFS7
PWWP2A
ZFYVE19
DNAJC17
TATDN3
NSL1
MTRNR2L10
H4C8
NEDD8-MDP1
NEDD8
GMPR2
SUDS3
PPP5D1
CALM3
RPL35A
IQCG
HNRNPUL1
NOC4L
DDX51
RHOT2
ZNF605
ARHGEF1
TOP2A
SMARCD2
SELENOH
RPAIN
NUP88
TXNRD1
NOP16
HIGD2A
AP2M1
SSBP2
USP48
VEZT
FGD6
BPNT1
RPL37
EPS15
INO80C
COPS7B
ATP5MG
CCNL1
ZNF211
SYT7
NDUFA10
CAPS2
RCAN1
KLLN
CCL3
H4C4
DMAC1
MTRF1
INTS10
ZCCHC4
MYOM2
LTN1
STK25
DYNC2I2
XAB2
GUF1
TOMM40L
ARHGEF2
TBP
PSMB1
ZCCHC8
TRAPPC9
VARS1
VRK1
PSMC5
FTSJ3
FCF1
AREL1
TOR1AIP1
PLEKHM3
COMMD2
HEMK1
ZNF628
API5
ABT1
TJP3
PROSER3
HSPB6
ZNF286A
THAP1
MDM2
ENPP4
EIF4A3
CLIC5
ACTL6A
ALKBH3
ZSCAN32
ZNF174
LNPEP
ATP6V1G1
ATP2C1
PEX3
ADAT2
KLF6
TMEM256
FLOT1
ABCF2
RPL14
ADPRS
FUT10
RAB5C
RAP2B
PRDM15
CCL5
TIMMDC1
ASXL1
SMCO1
CXCR5
DPP9
UQCRC2
KCTD5
MTRNR2L1
ILF2
NCOA7
KANSL3
PDE6D
TRMT10C
COX7A2L
TRAPPC3
USP3
SKA2
PRR11
DRAP1
C11orf68
KAT6B
HEXA
FSD2
BBX
KMT2C
HOOK1
NUP153
MED23
SLC33A1
CMSS1
EML2
LRRC14B
GCLC
FMO4
AQR
MNT
POLG
SNX15
C2orf42
HSD11B1
INSR
FAAP24
CEP89
TPST1
IFIT1
COPS8
TP63
LAS1L
CCDC77
ZNF26
WBP1L
MRPL20
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
RTEL1
PSMD4
KDSR
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
CWC25
C12orf4
UBB
RBM25
PRPF18
TUT1
TMX2
SPTLC3
MED19
KIF16B
ZNF749
ZNF609
ZBTB38
EPRS1
SCYL3
RAP2A
CRB1
C16orf72
KIF22
COPZ1
ARNTL
ZMYND8
RAD51AP2
ZNF226
NFKBIL1
MYCBP2
ATP6V1G2
MFAP3L
ATP5MC2
TSC1
TDRKH
RAB40B
GFI1B
RABL2A
DHX16
KLHL20
CLEC7A
ACBD4
UNC93B1
TBCK
STOML2
AIMP1
HAX1
CYP2R1
PSMD1
TLDC2
SH3GL1
PSAP
ECT2
TOMM40
TFB2M
MTR
KCNN3
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
CHD6
PTGES2
TCF3
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
NSMCE3
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
CDC23
ARL1
TTC21A
MTBP
MRPL13
GORASP1
AP3S2
SOD1
SACM1L
MAPK14
NCBP2AS2
NCBP2
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
JMJD4
DUS3L
RNF43
PRMT1
MRPS15
DMAP1
ATG101
ZMPSTE24
THADA
NUCKS1
ISOC2
FRYL
CCDC61
POLR2J3
KEAP1
FBXO8
CEP44
UBE2T
TAF3
NDUFAF1
INO80B
GTF2H2C_2
GTF2H2C
DNAJC14
DCP1A
LOC101927572
CCNC
ALKBH6
ZNF570
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
SSU72
LY9
EIF4A2
ZNF571