ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX8213853: SK-LMS-1

◢ SRX11525509: SK-UT-1

◢ SRX11525512: SK-UT-1

◢ SRX13466113: SK-UT-1

◢ SRX13466116: SK-UT-1

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L2
ADAMTSL1
MTRNR2L8
SPATC1L
TNFRSF19
SP2
DDX23
H4C15
H4C14
KATNB1
EVI5L
CLPB
BOD1
VPS50
HEPACAM2
UNK
DNM2
H4C11
TMEM115
CALCOCO1
H4C3
DDX49
COPE
CHMP4B
POLR3F
DZANK1
SP1
TCEA2
FEM1A
IFRD2
RWDD1
TBL1X
PHF12
H2BC4
FBXL19
AP2S1
TSN
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RBBP5
H4C2
MAPKAPK5
KHSRP
GALM
PHB
CIC
SCNM1
LYSMD1
WDPCP
MDH1
THRAP3
TSNAXIP1
RANBP10
MRPL24
FAM168A
BANP
DFFA
PRCC
MMACHC
CCDC163
RPS20
PPRC1
PAFAH2
RFX1
FAP
YJU2
TEPSIN
NDUFAF8
NCLN
CALR3
C19orf44
NUDCD1
SUCLG1
NEBL
HIKESHI
ST3GAL2
ZFYVE1
CCDC90B
TOM1L2
DRC3
PAK1IP1
C6orf52
TSC2
NTHL1
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
SLC25A25
NAIF1
TMEM208
LRRC29
RAB5B
BMF
PANK4
LRCH4
FBXO24
SPSB3
INVS
ERP44
PPP1R12B
GSPT1
SMPD3
ZNF17
CCDC146
COX16
UCKL1
IFTAP
COMMD9
VIPAS39
AHSA1
HNRNPC
NDC80
METTL4
RPS3
SNX16
ZNF417
PEMT
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PIGL
HRCT1
PES1
H4C12
ING4
SP5
C16orf91
PRR14
MTOR
PNKD
AAMP
GBA
STIP1
BUB1B
NUP107
PIN4
GATB
INTS1
GPR137
ZNF268
NOP16
HIGD2A
KHDC4
CNIH4
SRSF11
LRRC40
SNX17
EIF2B4
SF3B6
FAM228B
ZFPL1
CDCA5
TACO1
SYMPK
FOXA3
ZNF140
DDX41
C19orf53
WDR74
LARS1
ELOC
TMEM242
OSBP
RPS7
SF3A3
INTS9
HMBOX1
E2F4
MED27
TTI2
CCNL1
RPL32
CYCS
ZNF211
TFPT
PRPF31
DYNC1I2
NEDD8-MDP1
NEDD8
GMPR2
CRTC2
NOC4L
DDX51
RCAN1
DMAC1
ZNF547
TRAPPC2B
TSSC4
MTRF1
ZCCHC4
SCAF1
GTF2H4
ZNF225
RABL2A
SEC11C
TMTC3
CEP290
ZSWIM3
ACOT8
ZNF687
COX7C
STK25
RANBP2
SPHK2
RPL18
NUDT13
NDUFB5
MRPL47
GUF1
NUCB1
SMARCAL1
UBQLN4
LAMTOR2
ZNF165
STAM
CAND1
PSMB6
NDUFAF5
ESF1
TBP
PSMB1
WDR46
PFDN6
BUB3
H4C5
EHF
TCERG1
ZCCHC8
VARS1
GPR108
SMG8
METTL3
ZMAT2
RPS6KB2
KMT2B
VRK1
FCF1
AREL1
NUP205
COMMD1
CCT4
OAZ3
MRPL9
KBTBD6
TOR1AIP1
PNPLA6
TIMM21
FBXO15
SHPK
CTNS
PPP1R12C
EMC4
PLEKHM3
SLC35E2B
GTF3C3
HDAC9
ANAPC5
LIN37
GSTO2
THOC6
HCFC1R1
TRDMT1
PHB2
HEMK1
ZNF628
SIRT4
NPRL2
CYB561D2
ZFYVE19
DNAJC17
VWA5A
C12orf43
MRPL28
RHOT2
ZSCAN22
KRT15
ZNF605
TBL3
NR6A1
NUF2
MITD1
NDUFS3
KBTBD4
AK2
MRPL53
ABT1
MICOS13
HSD11B1L
UFD1
CDC45
AHCYL2
NFIB
SSBP2
ZNF286A
UBR2
CDK5RAP2
CTU1
VPS25
RPL37
POLDIP3
ATP5F1B
ATP5MG
PSMD11
ZNF383
DDX39B
ZNF337
EIF4A3
ALKBH7
SEL1L
ZSCAN32
ZNF174
HEXIM2
CCDC174
UBAC1
ATP6V1G1
FARSB
GOSR2
TATDN3
NSL1
PEX3
ADAT2
TMEM94
UFSP2
ARHGEF1
RPL14
AURKAIP1
LSG1
C1orf159
UTP11
ZC3H10
EFTUD2
CCDC103
CD2BP2
CRADD
RAB5C
FASTKD1
ACTR1A
NMT1
DCAKD
ZNF500
G3BP1
GSK3A
ZNF776
TIMMDC1
DCAF7
SEC13
SIRT2
NFKBIB
ZNF444
CLN3
SSR3
DSTYK
STT3A
SART3
ISCU
DLGAP1
KCTD5
PRRG2
NOSIP
VCPIP1
C8orf44-SGK3
STX16
SLX4IP
SELENOH
NME1-NME2
NME1
SLC8A1
SMARCD2
COPS7B
PDE6D
TMEM60
PHTF2
PNN
EXD2
KRT23
SMAD3
TRMT10C
COX7A2L
TRAPPC3
TSNAX
TBC1D10B
MYLPF
BABAM1
RPL18A
HEXA
ZNF143
LMAN2
FBXW11
CCAR2
SUPT7L
SLC4A1AP
FLAD1
TRAF7
API5
EXOC4
TPGS1
VEZT
FGD6
MTMR9
SNX15
SUPV3L1
RPIA
H4C8
SUGP1
MAU2
COPS7A
CIAO2A
ZNF235
CTDP1
LTN1
ZNF26
MRPL21
IGHMBP2
MRPL20
ZNF420
KRR1
ZNF384
THAP1
RBM25
SSBP1
RBM42
EIF3F
PWWP2A
RNF121
LOC100133315
SUDS3
TMX2
MED19
SCYL3
C1orf109
ZNF688
SLC35B1
SCRIB
SRD5A1
ZNF226
EIF2AK3
RPL27
TPRKB
ZBTB45
MARS1
ARHGAP9
TMEM63C
GET3
PABPN1
DHX8
DYNC2I2
USP48
TXNL4B
DHX38
CCDC59
DUS3L
ING3
RPL21
RGPD2
RGPD1
CACTIN
NLK
RNASEH2A
MTRNR2L9
VTI1B
RAB11B
ZNF335
SEC61B
ALG2
POLR2E
REXO1
H2AC6
ZNF576
IRGQ
ISY1-RAB43
ISY1
C19orf48
NDUFS7
UBE2I
HNRNPL
CCP110
MTRNR2L10
RPS27A
IPO13
CLHC1
SUFU
PCBP1
EXOSC5
BCKDHA
MRPS7
GGA3
PPP5D1
CALM3
RPL35A
JOSD2
IQCG
HNRNPUL1
CAPN15
ZNF691
RPL9
LIAS
STK36
RNF25
RBL1
PPP6R1
TRIP4
MRPS23
TRMO
TOP2A
RPAIN
NUP88
TXNRD1
PEAK1
HMG20A
LYRM4
FARS2
AP2M1
MRPS18C
HELQ
TMEM160
BPNT1
EPS15
STAM2
INO80C
H2AC19
H2AC18
SYT7
SLC39A9
ERH
SLC25A19
NDUFA10
CAPS2
USP30
PRORP
PPP2R3C
KLLN
CCL3
H4C4
NDUFB3
INTS10
FAM126B
MYOM2
MAF1
METTL26
TM9SF4
GABPB2
RABAC1
XAB2
SESN1
CEP57L1
TOMM40L
ARHGEF2
TRAPPC9
PSMC5
FTSJ3
GORAB
SF3B3
COG4
COMMD2
CCDC124
RPS23
ATP6AP1L
SREK1IP1
LTA4H
HSPA9
CWC27
NR1H3
ACP2
ZSCAN5A
BMERB1
NFATC2IP
EIF4A1
TJP3
SF3B5
NVL
ZC3H6
PROSER3
HSPB6
UTP3
RBM28
RPGRIP1L
FTO
MDM2
ENPP4
CLIC5
CGGBP1
ACTL6A
NMNAT1
LZIC
ALKBH3
XPNPEP3
ST13
ZNF548
LNPEP
ATP2C1
KLF6
TMEM256
FLOT1
ABCF2
CENPA
HBP1
MED24
ADPRS
FUT10
RAP2B
PRDM15
CCL5
ASXL1
ALG10B
SMCO1
CXCR5
MPV17L2
MCAT
DPP9
CNOT1
ADO
UQCRC2
PEX26
ZNF56
RTRAF
RTF2
MTRNR2L1
ILF2
NCOA7
KANSL3
VPS52
RPS18
TTC33
TGIF1
USP3
UBC
SNRPB
SKA2
PRR11
DRAP1
C11orf68
KAT6B
FSD2
BBX
NDUFC2-KCTD14
NDUFC2
KMT2C
HOOK1
NUP153
MED23
MAP2K3
CELF3
SLC33A1
ZNF608
CMSS1
PARP2
BTRC
SNRPD3
LAMP1
GUCD1
EML2
DOLPP1
LRRC14B
GCLC
FMO4
DHX33
AQR
AP1G1
MNT
POLG
MRM3
GLOD4
MRPL1
DCP1B
C2orf42
HSD11B1
INSR
PXMP2
POLE
FAAP24
CEP89
TPST1
RPS13
IFIT1
COPS8
TP63
LAS1L
CCDC77
WBP1L
LUC7L2
FMC1-LUC7L2
FMC1
CDC20
ZNF451
WAPL
GALK2
COPS2
TYK2
SMG5
RTEL1
PSMD4
KDSR
TLR5
TIMM22
SMARCE1
RAD51AP1
NR1H2
MPND
CWC25
C12orf4
UBB
PRPF18
WDR83OS
WDR83
TUT1
SPTLC3
KIF16B
FDPS
ZNF749
ZNF609
ZBTB38
EPRS1
ZNF565
ZNF146
MRPL44
ZNF552
RAP2A
GEMIN6
CRB1
C16orf72
KIF22
COPZ1
ARNTL
ZMYND8
SPC25
RAD51AP2
FOS
SAP30BP
RECQL5
FAM156B
FAM156A
NFKBIL1
MYCBP2
ATP6V1G2
NCDN
MFAP3L
KIAA0319L
CDK8
ATP5MC2
TSC1
TDRKH
RPL29
RAB40B
GFI1B
DVL2
ZNF584
ZNF419
RANGAP1
MAMSTR
FOXP2
DHX16
WBP2
KLHL20
CLEC7A
SART1
ATG4C
ACBD4
UNC93B1
TBCK
STOML2
MED6
AIMP1
RARB
HAX1
C3orf38
ATXN2L
CYP2R1
TMEM109
SNAPC3
PSMD1
IFI44L
DDR2
TLDC2
CSTF1
AURKA
SH3GL1
GABARAP
PSAP
NDUFAB1
NDUFA2
IK
ECT2
TOMM40
TFB2M
MTR
KCNN3
FBXW9
DDI2
CNST
ZSWIM1
ZNF668
ZNF646
SLMAP
HIRIP3
CHD6
TAF6
PTGES2
PNISR
IDH3B
DESI2
CNPY4
ASB4
ABCB8
TCF3
PPP1R37
GPR89A
GOLPH3L
FAM207A
ADRM1
PPIL3
NSMCE3
NIF3L1
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
RPS12
CDC23
ARL1
TTC21A
MTBP
MRPL13
GORASP1
AP3S2
AMOTL2
VPS4B
UBQLN1
SOD1
CEP128
SACM1L
CWC22
MAPK14
TMED10
NSA2
NCBP2AS2
NCBP2
GFM2
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
JMJD4
RNF43
RFC4
PTBP1
PRMT1
MRPS15
DPH2
DMAP1
CDKN2D
ATG101
ZNF112
ZMPSTE24
THADA
NUCKS1
NGDN
ISOC2
FRYL
EHMT2
CLEC16A
CCDC61
C2
SPNS1
POLR2J3
KEAP1
FBXO8
CEP44
UBE2T
TAF3
PTCD3
POLR1A
NDUFAF1
MVB12A
INO80B
GTF2H2C_2
GTF2H2C
DNAJC14
DCP1A
C10orf143
NUP214
NOLC1
LOC101927572
CCNC
C12orf73
ALKBH6
ZNF570
RPS26
PGP
OPA3
NOXA1
MORC3
HARBI1
GGCT
DAPK3
ATG13
SSU72
PRKCI
LY9
HSPA13
EIF4A2
BCAS2
ZNF571
ZNF540
TMEM101
SH3BP4
RPL26
RNF187
PDE12
LRRC45
CENPX
TPD52L2
TNFRSF17
PRICKLE4
NPIPB2
KAT7
INTS4
FRS3
C12orf57
BET1
TDP2
SPAG7
RPS27
RER1
MORN1
FLT3LG
ACOT13
TRAPPC6A
TLR4
RBM6
N4BP2L2
GTPBP3
FDXR
EXOSC4
BLOC1S3
B4GALT5
ANKRD40
ZC3HC1
UCHL5
TRNAU1AP
TRMT2A
TIPRL
RO60
RANBP1
KLHDC10
KDM4D
KAT6A
DARS2
CWC15
CHMP2A
CENPL
PSMD5
MLLT1
KNL1
KCNH1
ZNF76
U2SURP
TIMM13
SLC4A2
RPA2
RBSN
RABEP1
NOP53
MRPL54
CREM
CHD8
CDK5
APBA3
UQCRH
TSACC
LRRC41
FBXO38
CXXC1
CCT3
RABL2B
RAB11A
WDR53
WASF1
SPRY1
RNF5
HEXIM1
GOT1
FBXO45
CDC40
AGPAT1
ZNF830
VPS72
TRAF3IP3
NOL6
MKNK2
MIS18A